Phaethon lepturus (White-tailed tropicbird): 104613829
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Entry
104613829 CDS
T08325
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Pathway
plet04140
Autophagy - animal
plet04148
Efferocytosis
plet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104613829 (VPS11)
04148 Efferocytosis
104613829 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104613829 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plet04131
]
104613829 (VPS11)
Membrane trafficking [BR:
plet04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104613829 (VPS11)
Hops complex
104613829 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
Paralemmin
ISG65-75
zf-RING_11
zf-ANAPC11
DLP_helical
zf-C3HC4_3
zf-RING-like
DivIC
Motif
Other DBs
NCBI-GeneID:
104613829
NCBI-ProteinID:
XP_010289437
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDG
GNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILH
EGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSGKDYPHLELDSHGCGLRCSSLSDPSQ
DLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIVVSKDRKTSPKSEFAGNEA
QNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEM
LFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYV
IRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVRF
DVETAIKVLRQAGYYSHAVYLAEKHSHHEWYLKIQLEDIKNYQEALRYIGKLPFDQAESN
MKRYGKILMHHVPNETTELLKILCTDYRPSGDNEGPGMLEGKKANSEEFIPVFANNSREL
KAFLEHMTEVQADSPQGVYDTLLELRLQNWAHERDEQIKEKLHSEALTLLKSGRFKTVFD
KALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQAL
GYFARKEEDCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSR
QIEQDEQRIQKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQ
HCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGR
GVFNKLTLITDLPPGKAATTIEAGLQRELLIHTKRST
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcagatttggtttttgcctcgctcccttcaactcagtagtttccaagcgtac
aagctcagggtgacgcatctgtaccagctgaagcagcacagtatcttggtttctgttggc
gaggacgaagagggtattaaccccttggttaaagtctggaacctggagaaacgagatggt
ggcaatcctctttgcacgcgaatttttccagcgataccgggtaacaagcccacagttgta
tcctgcctgactgtccacgagaatcttaatttcatggctattggttttgcagatgggagc
gttgtacttacaaaaggagacatcacacgagaccggcatagtaagacccagatcctacac
gaaggcagttatccggttaccggccttgctttccgacagtctggcaaaacaacgcatcta
tttgtggtgaccacagagaacatccagtcttacatgctttcagggaaagactatcctcac
ctggaactggacagtcacggttgtggattgcgctgttcatctctcagtgacccctcccag
gatctccagttcatcgtggcaggaaacgaatgtgtgtacctttatcaaccggatgaacgt
ggcccctgctttgcctttgagggacaaaagctgattgttcactggtatcgggggtacctc
atcgttgtctccaaggaccgaaagacttctccaaagtcggagtttgccgggaatgaggca
cagaattcggacaagcaagtcctgaacatctatgatttgtgcaacaaattcattgcgtac
agctcgatcttcgacgatatagtggatgtcttggcagagtggggttctctatatgtgctg
accagagacgggaagattcacgtactgcaggagaaggatacgcaaacaaaactcgagatg
ctcttcaggaagaacttatttgaaatggccattaacctggccaagagccaccacttggac
agcgatggtttgtcagagattttccggcagtatggcgatcatctgtataacaaggggaat
cacgatggagccatccagcagtatatccgaaccatagggaagctggaaccatcgtatgtt
atacggaaattcctggatgctcagcgtatccacaacctcacagcttatctgcagacgctc
cacctgcagtccctggccaatgcagaccatactactcttctgctgaactgctatactaaa
ctcaaagacagctccaaactggaggagttcattaagacgagcgagagcgaggtccgcttt
gacgtggagacggcgatcaaggtgctgcgtcaagcgggctactactcccacgctgtgtac
ctggcggagaagcactcgcatcatgaatggtacctcaagatccagctagaggacatcaag
aactaccaagaggctttgcgctacattggaaaactgccttttgatcaggcagagagtaac
atgaagcggtacggtaaaatcctgatgcaccacgtccctaatgagaccacagaattgctg
aagatcctttgcactgattaccggccatcgggagacaatgaaggacctgggatgctggaa
ggaaaaaaggctaattcagaggaattcattccggtctttgcaaacaactcccgagagctg
aaggcttttctggagcacatgactgaggtgcaggctgactctccgcagggtgtctatgat
actttactggaacttcgactccagaattgggcacatgaacgagacgagcagatcaaggag
aagctgcacagtgaagccctcaccctcctgaagagtggaaggttcaaaacagtctttgat
aaggccttggtcttatgtcagatgcacaatttcaaggatggtgtcctttacctgtacgag
cagggcaaacttttccagcagatcatgcactaccacatgcagaatgagcagtacaagaag
gtgatcgaggtgtgcgagttgtacggagaccaagaggcttgtctctgggaacaggctctc
ggctactttgcgcggaaggaggaggactgcaaagagtatattgctgcggtgctgaaacac
atcgagaacaagaatcttatgcctccgctgcttgttgtgcagacgctggctcataactcc
acagccacactgtctgtgattaaggattatcttgtcaacaagctgcagaagcagagccgc
cagatagagcaggatgagcagagaattcaaaaataccgcgaagaaacgacaaggatccgc
caggagatcgaagagctaaaagcaagtcccaagatctttcagaagaccaagtgtagcatt
tgcaccagcgccctggagctgccttcagtccacttcctgtgtggtcattccttccaccag
cattgctttgaaagctactctgagagcgattcagaatgtcctacttgcatgccggagaat
cgcaaagtgatggacatgatccgagcccaggagcagaagagagatctgcacgaccagttt
cagcatcagctcaagtgttccaacgatggcttctccgttgtcgccgactactttgggcga
ggtgtcttcaataagctcaccctcatcacggacttgcccccgggaaaggcggctacgacg
atcgaggctggcctgcagcgggaactgctcatccacaccaagcgcagcacctga
DBGET
integrated database retrieval system
