Phaethon lepturus (White-tailed tropicbird): 104621677
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Entry
104621677 CDS
T08325
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plet01002
]
104621677 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plet04121
]
104621677 (USP47)
Enzymes [BR:
plet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104621677 (USP47)
Peptidases and inhibitors [BR:
plet01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104621677 (USP47)
Ubiquitin system [BR:
plet04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104621677 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
104621677
NCBI-ProteinID:
XP_010286525
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MKEFVSMNLYPEDMFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVT
LNLPASTQLKRLFEDVASKVGYVNGTFDLVWGNGDSVTDTTPIDQNSDRTILDAGFEPGK
KNFLHLTDKDGEQPHIMPEESGTTDDSAQDRFIGPLPREGSVGCTNDYVSQSYSYSSVLS
KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFV
LLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLY
QGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQ
YFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFI
DVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSE
KSSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSG
SRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQRE
IERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKY
DEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVV
DLKTESVGPPISVRAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTL
KAEGFFRSNKVFIESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRAV
YQKSSGDSTNLDEACERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQQEGDNGDSSKST
EASDFENIESPLNEIDSSASAENRELENQIQVSDPENLQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYD
ESGKSRGEAQYMYFKSEPYTTDEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHF
KVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKF
LLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDI
NISSNWEVFLEILDGIEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLC
EISGIPLENIEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDK
TEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatttgttagtatgaatttatatccagaggatatgttttggagttgcagacaa
agtatctttgctgaaatgaagaagaaattttcacaggtggaaagtgctgctgaggaaccc
agggtgctgtgtataatacaagataccacaaattccaagacagtgaatgagcgtgttacc
ttgaacctgccagcctccacacaacttaaaaggctgtttgaagatgtggcttcaaaagtg
ggctatgtgaatggaacttttgatttagtgtggggaaatggagatagtgtaactgatacg
actccaatagatcagaacagtgacagaactattcttgatgctggttttgagccaggcaag
aagaactttcttcatttgacagacaaagatggtgagcagcctcatataatgccggaggag
tcgggtacaacagatgacagcgcacaagacaggtttataggccctcttccaagagaaggc
tctgttggctgtaccaatgactatgtcagtcaaagctactcttactcttcagtcctgagc
aaatcggagacaggttatgtggggctagtgaatcaagcaatgacttgctacttgaacagc
cttctacaaacacttttcatgactcctgaatttagaaatgcattatataaatgggaattt
gaagaatctgaagaggatcctgtgacaagtatcccctaccagcttcaaagactatttgtt
ttactgcagaccagcaaaaaaagagcaattgaaacaacagatgttacacggagttttgga
tgggatagtagtgaggcatggcagcaacatgatgtacaggagctttgtagagtcatgttt
gatgctttggagcagaaatggaagcaaacagaacaggccgatcttataaatcaactatat
caaggcaaactgaaggactatgtaagatgtctagaatgtggctatgaaggctggagaatt
gacacttacctggatattcctttggtcatccggccgtatggctccaaccaggcgtttgct
agcgtggaagaagcactgcatgctttcattcagcccgaaattcttgatggccccaatcag
tatttttgtgaacgatgtaagaagaaatgtgatgcaaggaagggtctgcggttcttgcat
tttccgtatctgctgacattacagctgaagagattcgacttcgattataccactatgcac
agaattaaactcaacgatcgtatgacttttcctgaagagttagatatgagtgtcttcatt
gatgttgaagatgagaagtctcctcagactgagagttgcactgatagtggagctgaaaat
gaaggcagttgtcacagtgatcaaatgagcaatgatttttctaacgatgatggagttgat
gaaggaatctgcctcgaaagcaatagtgcagcagaaagaatttctaaagctggcagtgaa
aagagttctttactgtatgagctcttttctgttatggttcattctggaagtgctgctggt
ggccattattacgcttgtataaagtctttcagtgatgaccagtggtatagctttaatgat
cagcatgttagcaagataactcaggaagatattaagaaaacatatggtggatcttccgga
agcagaggctattattccagtgcttttgctagctccacaaatgcatacatgctgatttat
agactgaaggatccaacaagaaatgcaaagtttcttgaggcacatgagtatccagagcat
attaaacaattggtacagaaggagagagaattggaagaacaagaaaagagacaacgtgaa
attgagcgcaacacttgcaagattaaattgttctgcatgcatcctacaaaacaaataatg
atggagaacaaattagaagttcataaggacaggacactgaaggaagctgtggaaatagct
tacaagctaatggatttagaagaggccgttcctttggattgctgtcgtcttgtcaaatat
gatgagttccatgactacttggaacgatcttatgaaggagaagaggatactccaatgggt
ttattacttggaggtgtcaaatcaacatacatgtttgacttactgttggaaacaagacga
cctgaccaaattttccagtgctataaacctggtgaggtcatggtaaaggttcatgtagtt
gacctaaagactgaatctgttggtcctccaataagtgtacgagcctatttgaatcaaaca
gtttcagaatttaaacagctaatttcaaaggctacacacctgccagctgaaacaatgcga
gtagtattagaacgttgctacaatgacttgcgtcttctgaatgtttccagcaagacactg
aaagctgaaggcttttttagaagcaacaaggtatttattgaaagctcagagtccttagat
cgtcatgtggcatatacagattctcatttatggaaacttttggatcgtcatgcaaataca
atcagactgtatgtttcattaccagagcaatcgcctggatctcagtttagacgagcagtt
tatcagaagtctagtggagattcgaccaacttggatgaagcctgtgaaagagtaaaagga
cctgtaggtaatatgaaatctgtagaggcaattctggaagaaagcaccgaaaaacttaaa
agcttgtctctgcagcagcagcagcaggagggggataatggagacagcagcaagagcaca
gaagccagtgattttgaaaacattgaatctcctttaaatgaaatagactcttcagcatca
gcagaaaacagagaacttgaaaaccaaattcaggtttctgatccagaaaatctccagtcc
gaggaacggtcagattcagatgtaaataatgacaggagtacaagttcagtggacagcgat
atcctcagctccagtcatagcagtgatactttatgcaacgtggacaatgccccacttccc
ttggccaatggacttgattctcatagtatcacaagtagtaggcgatcaaaagcaaatcag
gggaagaaagaaacctgggacacagcagaagaagattctggaacagatagtgaatatgat
gaaagtggcaagagcagaggagaagcacaatatatgtactttaagtcagaaccctacact
accgatgaaggctcgggagaagggcaaaaatggctgatggtgcatgttgataaaagaatt
acactgtctgccttcaagcaacatttggagccttttgttggagttccatcttctcacttc
aaagtctttagagtctatgccagcaatcaagagtttgagagtgttcggctgaatgagaca
ctttcgtcattttctgatgacaataagataactattagacttggaagagcccttaagaag
ggtgaatacagagtcaaagtctatcagcttttggtaaatgagccagagccatgcaagttt
cttctagatgcagtttttgctaaaggaatgactgtccgacagtcaaaagaggagctgctt
cctcagcttcgagaacaatgtggcctagacttgacaattgacaggtttcgcctacgaaag
aaaacctggaagaacccaggcactgtgtttttggattatcatatctatgaagaagatatc
aatatttcaagcaattgggaggtcttcttagaaatacttgatggaatagaaaagatgaaa
tccatgtcacaacttgctgttttatcaagacgatggaggccatcagagatgaaactagat
tctttccaggaagtagtgctagaaagcagcagtgttgaagaattaaaagagaagctgtgt
gaaataagtggaatacccttagaaaacatagaatttgcaaagggtagaggaacgtttcca
tgcgacatttcgatactagagattcaccaagacttggactggaatcctaaagtatctaca
ttgaatgtctggcctctgtacatttgtgatgatggtgcagtaatattttatagggataaa
actgaagaattaatggaattaacagatgagcagagaaatgaactgatgaaaaaagaaagc
agcagactccagaaaactggacatcgggtaacctactctcctcgtaaagaaaaagcacta
aaaatttatctggatggagcgccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
