Phaethon lepturus (White-tailed tropicbird): 104622180
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Entry
104622180 CDS
T08325
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plet03000
]
104622180 (RC3H2)
04121 Ubiquitin system [BR:
plet04121
]
104622180 (RC3H2)
Transcription factors [BR:
plet03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104622180 (RC3H2)
Ubiquitin system [BR:
plet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104622180 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104622180
NCBI-ProteinID:
XP_010287194
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPETTGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKSGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPSIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPVATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDST
SSARYAERDRFIVTDLSGHRKHSSTGDLLTIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKGTDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITTSVSNASCLPISTPVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttgaagccattaagtggaggaaaaggtgttgcaagc
ttgaaccagagtgcactaagccgtccaatgcaaaggaagcttgtgacgctggtgaattgt
cagctggtggaggaagagggtcgggttagagctatgagggcagctcgatcactgggagag
aggactgttacagaattgatcttgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttcctcaggcctctaaaacaagcattggt
cacgttgtgcagctactgtatagggcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagaacat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatttcaccagaacagtgg
tcttcccttctttatggtgacttggcgcataaatcacacatgcaatccattattgacaag
ctccaatctcccgaatcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacgtgggagcagctggaaaatgcaatggttgct
gtaaagactgtggtacatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatataaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaaggggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcactgtctcaaccacaacaggaaacgtaatttctgtcata
ggaagccctgaaacaacagggaagatggtgccaagtactaatggaatagctaatctagaa
agtggtgttcctcagttgatccctcgctgtgcggacacctccttaagagctttggagaac
accaagaagggagggaagtctggagccaatggacagaatgtttcaggatcacctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctagtattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacctgtctaccctccgcattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacaggatactatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctccagtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgtcaacctccaaacgaacagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagttaagacggaagccagagcaatgg
gcgcagtaccacacgcagaaaactcctctggtatcgtcaactcttcctgtggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctgtctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatttggacagtggggatgttaaaaggagagtgcat
ttatttgaaacccagagaagggcaaaggaagaagatcctataatcccatttagcgatgga
ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacgaca
gatcctattcaagccactgcttcccaaggaagtgctacgaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgttgactcaagatggagtgcctatggctcagattctact
tcatcagcacgttacgcagaacgggacaggttcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctattgactattgaattgcagcaggccaaaagtaactca
ttattacttcagagagaggcgaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
gtaaagaaagggactgattatactgaagactgtgcagacacaaagccagatcgagacatt
gaattggagctgtcagcccttgatacagatgaacctgatgggcaaggtgaacaaatagaa
gagattctggatatacagctaggtattagttctcaagatgatcagctgctcaatggaaca
accgtagagaatgggcatccactaaagcagcaccagaaagaatctatggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagc
acaccagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
