Phaethon lepturus (White-tailed tropicbird): 104627238
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Entry
104627238 CDS
T08325
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
plet
Phaethon lepturus (White-tailed tropicbird)
Brite
KEGG Orthology (KO) [BR:
plet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plet03000
]
104627238 (SOX6)
Transcription factors [BR:
plet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104627238 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104627238
NCBI-ProteinID:
XP_010293670
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MAYHQQLYAAQLASMQVSPGAKMPSTPQPPSTTGALSPTGMKNEKRGTSPVTQVKDEAAQ
PLNLSARPKTAEPVKSPTSPTQNLFPASKSSPVTVTNKSGIPSPLGGSLGRGSSLDILSS
LNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQQPHGVDGKLPSLNNMGLNNCRNEKE
RTRFENLGPQLTGKPSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATV
AEARVYRDSRGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSM
SNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMR
QFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGM
KTDSGSLAGNEMINGEDEIEMYEDYEDDPKSDYSSENEAHEAVSAN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccatcagcaactatatgcagctcagctggcaagcatgcaagtttctcctgga
gccaaaatgccatctactccacagccaccaagtacgacaggggcactctcacccactggg
atgaaaaatgagaagagagggaccagcccggtaactcaagttaaggatgaagcagcccag
ccactgaatctttcagcccgacccaaaacagctgaacctgtcaaatccccaacatctcca
acacagaacctcttcccagctagtaaaagcagtccagtcacagtgacaaacaagagtggc
atcccgagcccgctcggtggatctctgggaagaggatcctctttagatatcctttccagt
cttaattcccctgccctatttggggaccaggacaccgtaatgaaagccattcaggaggct
cgaaaaatgagagagcagatccaaagggagcagcagcagcaacagcagccgcatggtgtt
gatggaaaattgccctctctgaataacatgggtctaaacaactgcaggaatgaaaaggaa
agaacaaggtttgaaaatttaggcccacagttaacagggaaacccagtgaagatggaaaa
ctgggccctggtgtcatcgatcttacaaggccagaagatgcagaagggagtaaagcaatg
aatggctctgcagctaaactacagcagtattattgttggccaacaggaggtgccactgtg
gccgaagcccgagtctaccgggattcgcggggccgagccagtagcgaaccgcacatcaaa
cgaccaatgaatgctttcatggtttgggcaaaggatgagcgccgaaaaattcttcaagcc
ttccctgacatgcacaactccaacattagcaaaatcctagggtctcgctggaagtccatg
tcaaatcaagagaaacaaccttattatgaagagcaggcacggctaagtaaaatacaccta
gaaaagtaccctaattacaaatacaaacctcgaccaaaacgtacctgcattgttgatgga
aagaaactgcgtattggtgaatacaaacaactgatgaggtctcgaagacaggagatgagg
cagttttttaccgtaggacaacagcctcaaattccaatcaccacgggaacgggggttgtc
tatcctggtgctattaccatggcgactaccacgccatcacctcagatgacatcagattgc
tcgagcacctctgccagccctgagcccagcatccccgtcattcagagcacttacggtatg
aagacggacagcggaagccttgctggaaatgaaatgataaatggagaggatgaaatagaa
atgtacgaggactatgaagatgatcccaaatcagactatagtagtgaaaacgaagcccat
gaggcagtcagtgccaactga
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