Peromyscus leucopus (white-footed mouse): 114681847
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Entry
114681847 CDS
T07241
Symbol
Samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03250
Viral life cycle - HIV-1
pleu04623
Cytosolic DNA-sensing pathway
pleu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114681847 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
114681847 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
114681847 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114681847 (Samhd1)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114681847 (Samhd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
SAM_Ste50p
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
114681847
NCBI-ProteinID:
XP_028711429
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All DBs
Position
4:complement(133511607..133551544)
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AA seq
667 aa
AA seq
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MALLNGLASRAVQSVRLRVGRVPRYLSALHRASEEVTMQSAGPEQPAKRPRCEGSPRTPQ
RTPPAAANASPGCDLHTDLRTWEVEDVCSFLETCGFLEKKVLDSFKENKITGSFLPFLNE
SRLENLGVSSLEERKKMIACIQELSQSHIELMKVFNDPIHGHIEFHPLLIRIIDTPQFQR
LRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRALAEKQPELQISERDMLCVQIAG
LCHDLGHGPFSHMFDSRFIPRARPDKNWRHEQGSVEMFEHLVDSNDLKPIMKNYGLIPEE
DIDFIKEQIMGPPETPVKDSSWPYKGRPAKKSFLYEIVANKRNGIDVDKWDYFARDCHHL
GIQNNFDYKRFVKFARICEVEDKAGCKMKHICTREKEVGNLYDMFHTRNCLHRRAYQHKI
SNLIDIMITEAFLKADPYMEFTGAGGEKFRISTAIDDMEAFTKLTDNIFLEILYSTDPKL
SEARNILKNIENRNLYKYLGETQPNGQDRIKKEDYKQLPQDIADAKPDVPLEAQLKAEDF
EVDVINMDYGMEDKNPVDHVHFYCKSNTKHAVLISKDQVSQLLPQKFAEQLIRVYCKKKD
KKSLYAARQHFTQWCADRDFTKPQDGDIIAPLITPLKWKKDHLGCRQKAPKDEVKKQLFP
GSGGARL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcactgctgaatggactcgcctccagggctgtgcagtcagtgcgactgcgcgtgggc
cgggtgccgcgctacttaagtgcgctgcaccgagcgtcggaggaggtaaccatgcagagc
gcgggtcccgagcagcccgctaagcggcctcgctgtgaaggcagcccgagaacgccacag
cgcaccccgcctgcagcggcgaacgcgtctccgggctgcgacctccacaccgacctccgg
acctgggaagtggaggacgtgtgctccttcttagagacatgtggcttcctagagaagaaa
gtgctggacagcttcaaagaaaataaaatcactggttcatttctgccctttctcaatgag
tctcgtcttgaaaatcttggagtaagttccttggaggagaggaagaagatgattgcatgt
atccaagaactgagtcaatctcacatagagctaatgaaggtatttaacgatcccattcat
ggccatattgagttccaccctctccttatccggatcattgacacacctcagtttcagcga
cttcgatacattaaacagctgggaggcggctactatgttttcccaggagcgtctcacaat
cgctttgaacacagtctgggggttgggtacctagcaggctgccttgttcgagcactcgct
gaaaaacagccagagctgcagatcagtgagcgagacatgctctgcgttcagattgccggg
ctctgccatgaccttggtcatgggccattttctcatatgtttgattcaagatttatccca
cgtgctcgcccagataaaaattggaggcatgaacagggctcagttgagatgtttgagcat
ctggttgattctaatgacctcaaacctatcatgaaaaactatggtctcatccctgaagaa
gatattgactttatcaaggaacaaattatgggaccacctgaaactccagtcaaagactct
tcgtggccctataaaggacgtcctgccaagaagagcttcctttatgagatagtagctaac
aagagaaatggcatcgatgtggacaaatgggattattttgccagggactgtcaccatctt
ggcatccaaaataattttgattacaagcgctttgttaagtttgcccgtatctgtgaagtg
gaagacaaggctggctgtaagatgaagcacatttgtactagagaaaaggaggttggaaat
ctgtatgacatgttccacacacgcaactgcttacaccgaagggcttatcaacacaaaatc
agcaacctcatcgacataatgatcacagaagctttcctcaaagcagacccctacatggag
tttacaggagccggcggggaaaagttccggatttctacagccattgatgacatggaagcc
ttcactaagctgacagataacatttttctggagattttatattctactgatccaaagttg
tctgaggcacgaaatattttaaagaacatcgaaaaccgtaatctatacaagtatttgggt
gagacccagccaaacggtcaagacaggattaaaaaggaagactataaacagcttccccaa
gacattgctgacgccaaacctgatgtgccactggaagcccagctgaaggccgaagatttc
gaagtggatgttatcaacatggattatgggatggaagacaagaatccagttgatcatgtt
cacttctattgcaaaagtaacacgaagcatgcagtcttgatctctaaggaccaggtgtca
caacttctgccacaaaaatttgcagagcagctgattcgagtgtactgtaagaagaaagac
aagaagagcctgtatgccgcccggcaacatttcactcaatggtgtgcggacagagacttc
accaagccacaggatggtgacattatagccccacttataacacctctgaaatggaagaaa
gatcatctaggttgccgccaaaaagcgcccaaagacgaagtcaaaaaacagctctttcca
ggcagtggtggcgcacgcctttaa
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