Peromyscus leucopus (white-footed mouse): 114682501
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Entry
114682501 CDS
T07241
Symbol
Scn10a
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114682501 (Scn10a)
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114682501 (Scn10a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
114682501
NCBI-ProteinID:
XP_037064137
LinkDB
All DBs
Position
7:complement(108095329..108154794)
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AA seq
1581 aa
AA seq
DB search
MTESFMETMKAIEVPCCWPGVLGRQVLFPGAHWLHLPTLGLDTEKRDSAQCPLVSSPLEL
LKTWKHSNKSGLRVELRDAIYLRTPSASLTVRLQLPQARTGYQTHIGKETCKGTVVWLFP
LSLALEAAGQKKNFLSAEYLNEPFRAQRAMSVVSIMTSVIEELEESKLRCPPCLISLAQK
YLIWECCPKWMKFKMVLFELVTDPFAELTITLCIVVNTIFMAMEHYPMTEAFDAMLQAGN
IVFTVFFTMEMAFKIIAFDPYYYFQKKWNIFDCVIVTVSLLELSIAKKGSLSVLRTFRLN
SVFLSVQALNAASVQFRPGPFISVSTVKSLFQIRPDVSMAAPPTDKLTDTLRVFKLAKSW
PTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQLLGEDYGCRKDGIALWNDEQLRW
HLCDFFHSFLVIFRILCGEWIENMWVCMQVSEKSICLILFLTVMVLGNLVVLNLFIALLL
NSFSADNLTAPEDDGEVNNLQVALARIQAFGQRASQAISSYFGSHCRLRWPKVEPQLGVK
PSLTSSKAENHVAADAVSSAVGNSAKAALGGPKEDHRDDFITDANVWVSVPIAEGESDLD
ELEEDIEQNSQSSWREESPRGQYRTPVQGHCPHSGIRNSCRKSKGVKTKYLTAQALGCPR
RTWLHTWVRDGKVRLPLKSLPRVWDLGPVPAPQACNFIYRTHGSTYLGVDDTSSSEGSTV
DCPDPEEILRKIPELADDLEEPDDCFTEGCMRHCPCCKVNTSKFPWATGWRLRKTCYRIV
EHSWFESFIIFMILLSSGALAFEDSYLEQKPRVKSLLEYTDRVFTFIFVFEMLLKWVAYG
FKKYFTNAWCWLDFLIVNISLTSLIAKILNYSDVASLKALRTLRALRPLRALSRFEGMRV
VVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSRCIDTSNNPFSVVNSTIVTNK
SECENQNHTGHFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSREINSQPQWE
DNLYMYLYFVVFIIFGGFFTLNLFVGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIVIMVLICLNMITMMVETDEQSEEKTKILG
RINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVILSIGSLVFSAILKSLESYFSP
TLFRVIRLARIGRILRLIRAAKGXRTLLFALMMSLPALFNIGLLLFLVMFIYSIFXMASF
ANVVEEAGIDDMFNFQTFGNSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLSNNSTSR
GNCGSPAVGIVFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDFDMFYETWE
KFDPEATQFIAFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKIHCLDILFAFTK
NVLGESGELDSLKTNMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQKAYRSYVLQR
SLTLSNPLRVPRAEEDDAPLPGEGYVTFMANNSGGLPDKSETASATSFPPSYDSVTRGLS
DSSMHNEDEVTSKEGGSPGPQ
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtctttcatggagaccatgaaagccatcgaggttccctgttgctggccaggg
gtgctgggcagacaggtcctcttcccaggagcccattggcttcatctcccaaccctgggc
ctggacacagagaagagggacagcgcacagtgcccactggtgagctctccactggagctc
ctgaagacctggaaacatagcaacaagtctggactccgtgttgagttgagagatgcaatt
tatttgagaactccttcagcatcactgacagtgcgtctgcagcttccacaggcccgcacc
ggctaccagacgcacataggcaaagagacttgtaaaggcaccgttgtgtggctgtttccc
ctgagtctggcacttgaggctgcggggcagaagaagaattttctgtctgcagagtacttg
aatgagcctttccgagcacagagggcgatgagcgttgtcagcatcatgacttctgtcatc
gaggaacttgaagagtccaagctgaggtgcccaccctgcttgatcagcttggctcagaag
tatcttatctgggagtgctgccccaagtggatgaagttcaagatggtcctcttcgagctg
gtgaccgatccctttgcagagctcaccatcaccctgtgcattgtggtgaacaccatcttc
atggccatggagcactaccccatgaccgaggccttcgatgccatgctccaagccggcaac
attgtcttcacggtgtttttcacgatggagatggccttcaagatcattgccttcgaccct
tactactacttccagaagaagtggaatatcttcgactgcgtcatcgtcaccgtgagcctg
ctggagctgagcatagccaagaagggcagcctgtctgtgcttcggaccttccgcctgaac
tcagtatttctctccgtgcaggccctgaacgctgcatctgtccagttcaggcctggtcct
ttcatctctgtctccactgtgaagagcctctttcagatcaggcctgatgttagcatggct
gctcctcccacggacaagctgacggacacactgcgggtcttcaagctggccaaatcctgg
cccaccctgaacacactcatcaagatcattgggaactccgtgggggccctgggcaacctg
accttcatcctggccatcattgtcttcatctttgccctggttggaaagcagcttctcggg
gaggactatgggtgccgcaaggatggcatcgctctgtggaatgatgagcagctccgctgg
cacttgtgcgacttcttccattccttcctcgtcatcttccggatcctctgcggagaatgg
attgagaacatgtgggtctgcatgcaagtcagcgagaaatccatctgcctcatccttttc
ttgactgtgatggtgctgggcaacctggtggtgctcaaccttttcatcgccttgctgctg
aactccttcagtgctgacaacctcacggcccctgaggatgatggggaggtgaacaacttg
caggtagcactggccaggattcaggcatttggccagcgggccagtcaggccatttccagt
tacttcggcagccactgccggctccgctggccgaaggtggagccccagctcggggtgaaa
ccctccctcaccagctccaaagctgagaaccacgttgctgctgatgccgtcagcagtgcg
gtgggaaactcggcaaaggcagctctcggtggccccaaggaggaccacagggacgacttc
atcaccgatgctaatgtgtgggtctctgtgcccattgctgagggagaatctgatctcgat
gagctcgaggaagacattgagcagaattctcagagctcttggcgggaagagagccccaga
ggacagtacaggaccccagtgcaggggcactgcccacattcaggcatcaggaacagctgc
cgcaagtccaaaggtgtgaagaccaagtacctaacagcccaggctctgggatgtcctcgg
aggacctggcttcatacctgggtgagggatggaaaagtgaggctacccctcaagtccctg
ccgagggtgtgggacctagggccagttcctgctccgcaagcctgcaacttcatctacaga
actcatggcagcacctatttgggagtggatgatacaagctcttctgagggcagcacggtg
gactgcccagatccagaggagatcctgaggaagatccccgagctggcagacgacctggaa
gaaccagatgactgcttcacagaaggctgcatgcgccactgtccctgctgcaaagtgaat
accagcaagtttccgtgggccaccggctggcggttgcgcaagacctgctaccgcatcgtg
gagcacagctggttcgagagtttcatcatcttcatgatcctgctcagcagcggggcgctg
gcctttgaggatagctacctggaacaaaagccccgagtgaagtctctgctggagtacacc
gacagagtgttcaccttcatcttcgtgtttgagatgttgctcaagtgggtggcctatggc
ttcaaaaaatatttcaccaatgcctggtgttggctggacttcctcattgtgaatatctcc
ctgacaagcctcatagcaaagatcctcaactattcagacgtggcatccctcaaagccctt
cggactctccgtgccctccgaccactgcgggctctgtctcgattcgaaggcatgagggta
gtggtggatgcgctggtgggcgccatcccctccatcatgaacgtcctccttgtctgcctc
atcttctggctcatcttcagcatcatgggcgtgaacctctttgcagggaaattttcgagg
tgcattgacaccagcaataatccattttctgttgtgaattcgaccattgtgactaacaag
tctgagtgtgaaaatcaaaaccacactggccatttcttctgggtcaacgtgaaagtcaac
tttgacaatgttgctatgggttacctcgcacttcttcaggtggcaacattcaaaggctgg
atggacattatgtatgcggctgtcgattcccgagagatcaacagccagcctcagtgggag
gacaacctgtacatgtacctctacttcgtcgtcttcatcatttttggaggcttctttaca
ctgaacctctttgttggggtcataattgacaacttcaatcaacagaagaaaaagataaga
ggtcaggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaagctg
ggctccaagaagccccagaagcctatcccacggcccctgaataagtaccagggctttgtg
tttgacatcgtgaccaggcaagcttttgatatcgtcatcatggtccttatttgcctcaac
atgatcaccatgatggtggagactgatgagcagagtgaggagaagacaaagatcctgggc
agaatcaaccagttcttcgtggccgtcttcacgggcgagtgtgtaatgaagatgttcgcc
ctgcggcagtattacttcaccaatggctggaatgtgttcgacttcatcgtggtgatcctg
tccattgggagtctggtgttttctgcaatccttaagtcacttgaaagttacttctcccct
acactcttccgggtcatccgtctggccagaatcggccgcatcctcaggctgatccgagca
gccaagggantccgaacactgctctttgccctcatgatgtccctgcctgctctcttcaac
atcggcctcctgcttttccttgtcatgttcatctactccatctttngcatggccagcttt
gccaatgttgtggaagaggctggcatcgacgacatgttcaacttccagaccttcggcaac
agcatgctgtgccttttccagatcaccacatcagcaggctgggatggcctcctcagtccc
atcctcaacacaggtcccccatactgtgaccccaacctgagcaacaacagtacctccagg
gggaactgtgggagcccagcagtgggcatcgtcttcttcaccacctacatcatcatctcc
ttcctcatcgtggtcaacatgtacatcgcggtgattctggagaacttcaatgttgccaca
gaggagagcacagagcccctgagtgaggatgactttgacatgttctatgagacctgggag
aagttcgacccagaggccacccagttcattgccttttctgccctctcggattttgcagac
acactctctggccctcttagaatcccaaaacccaatcagaatatattaatccagatggac
ctgccattggtgcctggagataagatccactgtttggacatcctttttgccttcacaaag
aatgtcttgggagaatctggagagttggattctctgaagactaatatggaagagaaattt
atggcaactaacctttccaaagcatcctacgaaccgatagcaaccaccctccggtggaag
caggaagacatctcagccactgtcattcaaaaggcctatcggagctatgtgttacagcgc
tccttgacgctctccaaccccctgagagtgcccagggctgaggaggatgatgcgccactc
cctggtgaaggctacgtcacattcatggcaaataacagcggcgggctcccagacaaatca
gaaactgcttctgccacatcgtttccaccatcctatgacagtgtcaccaggggcctgagt
gacagctcaatgcacaatgaagatgaagtcaccagtaaggaggggggcagccctggacct
cagtga
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integrated database retrieval system
