Peromyscus leucopus (white-footed mouse): 114686008
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Entry
114686008 CDS
T07241
Symbol
Pom121c
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear envelope pore membrane protein POM 121C
KO
K14316
nuclear pore complex protein Nup121
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114686008 (Pom121c)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
114686008 (Pom121c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114686008 (Pom121c)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114686008 (Pom121c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
114686008
NCBI-ProteinID:
XP_028716490
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All DBs
Position
23:complement(26805113..26823972)
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AA seq
1206 aa
AA seq
DB search
MSPAAAAAGGVERRRPPLGVREGRGRARGCGGPAGAAALGLALLGLALYLVPAAAALAWL
AVGASAAWWGLSREPRGPRGLSSFVRDSRRPPRPALTASPPPAKSAANGSLCEPRSPLGG
PDPAELLLMGSYLGKPGPPQPALAQDPRDRPGRRPPACSPPPASAAQRVHHVYPALPTPL
LRSSRRLPHRDCGSLSSRFVITPXRRYPIQQAQYSLLGALPTVCWNGGHKKAVLSARNSR
MVCSPVTVRIAPPDSKLLRSPMPEQMLNTALSSPSSNAPDPCAKETVLSALKEKKKRTVE
EEDQLPLDGQENKRRRHDSSGSAHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLN
KRSRTSSVSSLPGTCTGGIPSSSRNAITSSYSSTRGLSQLWKRSGPTSSPFSSPASSRSQ
TPERPAKKTREEEPCPHSSSSAPLVADKESPGEKVTDTATGKQQNSWASPPTPGNSGQRK
RKVQLLPSRRGDQLTLPPPPELGYSITAEDLDMERRASLQWFNKVLEDKMDDASTSASEP
PPAANPPFTFTPPAVAPAASAASLPAPSSNPLLESLKKMQESPAPPSSEPAAPAATAAPS
PPKTPSLLSPLVSPLTGPPSASASSDSKPAAAFLGLASSASATPLTDDTKSPGVPQAEQP
GSTPASSAPSPTPKPSMLFGMLSPPATSSAATPGPACASPMFKPIFLATPKSESEGPLPS
SSSSATTTTSSSTSLATTASTPAPTFKPIFDSVEPFPAMPLAAPFSLKQTAAAATTTATP
SPLFTGLGTAASTAASGTTASASKLVFGFGVTTVASSASSTVTSTSQTLLFGGAPPVTAA
SSAPALSSIFQFGKPPAAAAATAASAVGTSFSQPLASSAQTVAGGSGTSGFGGFGSTLTT
SSSAPATSSQPTLTFSSTATPTFNIPFSSGAKPAPPPAYPGAAPQPTFGAAGGASKPALA
PSFGSSFTFGNSVASAPSAAPAAATFGSAAQPAFGGLKAAASTFGTPASTQPAFGNTTSV
FSFGSATTSGFGATTQTTTSGSSSSLFGSSAPSPFTFGGSAAPSASGGFGLGATPGTSST
SGTFSFGSGPSGTTGTTTSFGGSLSQNTLGTPSQSSPFAFNAGSASESKPVFGGTATPTF
GQSAPAPGVGTAGSSLSFGASSTPAQGFVGVGAFGSAAPSFSIGAGSKTPGARQRLQARR
QHTRKK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggctgcggcggctggcggagtcgagcggcggcggcccccgctgggcgta
cgggagggccggggtcgggcccgcggctgcggaggaccggcgggtgccgcggcactcggt
ctcgcgctcctgggcctcgcgctctacctggtgcccgcggcggccgcgctggcctggctg
gccgtgggggcgagcgcggcctggtggggcctgagtcgcgaaccccgcggcccgcggggc
ctgtcgtcgttcgtgcgggactcgcgccgccccccgcggcccgcgctcaccgcttcgccg
cctccggccaagtcagcggccaacggcagcctctgtgagccccgcagccctctcggaggc
cccgaccccgccgagctcctgctcatgggcagctacctgggcaagcccggcccgccccag
cctgccctagcgcaggaccctcgggacaggccgggccgccgcccacccgcatgctccccg
ccgcccgcgtcggcggcccaacgagtccaccacgtctatcccgcgctccccaccccgctc
ttacgatcctcccggaggctgccccatcgagattgtgggtctttatccagtcgattcgtt
ataacacccngaagacgatatcccattcagcaggcccagtattccttgcttggggcactg
ccaacagtttgctggaatggtggccacaagaaggctgtgctgtctgcacggaactcaagg
atggtgtgtagcccagtgacagtgaggattgcccctccagacagcaagttacttcgctca
ccaatgccagagcagatgctcaacacagcactgtcttcaccatcgagtaatgccccagac
ccttgtgcgaaggagactgtgctgagcgccctcaaggagaagaagaaaaggacagtggag
gaggaagaccagctaccccttgatggccaggaaaacaagagaaggcgccatgatagcagt
gggagcgcgcattcggcattcgagccccttgtggccaacggagtccccgccgcgtttgtg
cctaagcctggctccctgaagagaagtctggcttcccagagctccgatgaccacttgaac
aaacggtctcgaacctcctctgtgagctccctgcctggtacctgcacaggcggcatcccc
agctccagccgcaatgccatcaccagctcctacagctccacccgtggcctctcccagctg
tggaagaggagtggtcccacctcctcccccttctccagcccagcttcctcccgctcccag
actccagagaggccagccaagaaaacaagagaggaggagccgtgcccccattccagttct
tcagctcccttggtagcagacaaggagtccccaggagaaaaggttacagatacagccacc
gggaagcagcagaactcttgggcttccccacccacgcctggcaactctgggcaacgcaaa
cgcaaggtgcagttgctgccctcccggcgaggggaccagctcaccctgcctccaccccct
gagctcggctattccatcactgccgaagacctggacatggagaggagagcctcgctgcag
tggtttaacaaggtcttggaggacaagatggacgatgcgtccacctcggccagtgaaccc
ccacctgctgccaatcctcctttcacatttaccccgcctgctgtggctcctgctgcctcc
gcagcctccctcccggctcctagctctaacccactgttggagagcttgaagaagatgcag
gagtctccagccccgccatcctcagaacctgctgcgccagcagctactgcagccccttcg
cccccgaagacccccagcctcctgagccctctggtctcaccactgacagggccgccgtcg
gccagcgcctcctcagactccaaacctgcagccgccttcctggggctggcctcttctgca
tctgcaacaccactcactgacgacaccaagtcccctggagtccctcaggctgagcagcct
ggcagcaccccagcctcctcggctccctcccccaccccaaagcccagcatgctgttcggg
atgctgagcccacccgccacttcctccgctgccacgcccggcccagcttgtgcttctccc
atgtttaagcccattttcctggccacccccaagagtgagagtgagggccccttgccatcc
agctcctcctcagccaccaccaccacttcgtccagcacctcgctcgccaccacagccagc
accccagctcccactttcaagcccatctttgacagtgtggagccctttccagccatgccc
ctggcagcccccttctccctgaagcagacagctgctgccgccaccacgacagccacccca
tcccctctcttcactggcctgggcactgccgcctccacagcggcctctggcaccacagcc
tctgcctccaagctcgtgtttggctttggagtgaccacggtggccagcagtgccagcagt
acggtgacgtccacctcgcagacacttcttttcgggggagcgccccctgtcactgctgcc
agttctgccccggccctgtcctccatcttccagttcggcaagccccctgccgctgccgcc
gccaccgcggcgtctgcagtgggcacctccttcagccagccccttgccagctctgcccag
accgtggccggcggcagcggcactagtggcttcggtggctttggcagcaccctcaccacc
tcctcctcggcccccgccaccagcagccagcccacactgaccttcagcagcaccgccacc
cccaccttcaacattccctttagctccggggccaagcctgcgccgccgccggcctaccct
ggagccgccccgcagcccacgtttggagccgctggcggggccagcaagccagccctggcc
ccgagtttcggcagctccttcactttcggcaactccgtggcctcggccccgtcggcagcc
ccggcagcggccacctttggcagcgctgcacagccggctttcggcggattgaaagccgca
gcctccacctttggcacccctgccagcacgcagccggctttcgggaacaccacgtcggtg
ttctcctttggttcagccaccacctccggctttggagccaccacgcagaccaccaccagt
gggagcagcagctctctatttggcagctctgcgccgtccccgttcactttcggtggctca
gccgctccgtctgccagtggaggctttgggctcggggctaccccaggcaccagctccacc
tctgggactttcagctttggatcgggaccgagcgggaccacgggcaccaccacctctttt
gggggaagcctgagtcagaacaccctgggcacacccagccagagctcacccttcgccttc
aatgcgggcagtgcatctgaaagcaagcctgtgtttggaggcacagccacacccaccttc
gggcagagtgcccctgcccctggagtgggcaccgcaggcagcagcctctcatttggggcc
tcctcaacacctgcccaaggctttgttggagttggagctttcgggtcagcggccccttcc
ttttccattggcgcgggatccaagaccccgggggcccgacagcgacttcaggcccggagg
cagcatacccgcaagaagtag
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