Peromyscus leucopus (white-footed mouse): 114693659
Help
Entry
114693659 CDS
T07241
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pleu03016
]
114693659
Enzymes [BR:
pleu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
114693659
Transfer RNA biogenesis [BR:
pleu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114693659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Hydrolase
Motif
Other DBs
NCBI-GeneID:
114693659
NCBI-ProteinID:
XP_028725975
LinkDB
All DBs
Position
23:21538808..21625443
Genome browser
AA seq
724 aa
AA seq
DB search
MGPLDVWDFSSPLLLLWVNRFYIYLGCALGVTLWICVQVVIKKQVTRSQEKSVPGAPGNS
LSLQKKESHVSGVKIFYGSQTGTAKGFAVTLAKAVTSLDLPVAVINLKDYDPDDSLIGEI
TSKNVCAFLLATYTDGRPTESAEWFSKWLEEAANDFRFGKTYLKGLRYAVFGLGDSAYRS
HFNKVSTNVDKWLWMLGAQRVLTRGEGDRNAVQSKHGSIEADFTAWKTKFIARLQALQTG
EKKKTCSGDCKRGKCESTQPGAGETRPHLQGELHPRDAEEEEPCESSSEEESGTQDYQSL
SSVVDVEDLGNIVNPLKKEKREKAPQEERGGVKRNPERSEDSEGRAMITPALREALTKQG
YQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHT
NPVGTEWRWKMDQPELILKEAIENHQNMIKQFKGVPGLKAERFEEGLEVKHCALSLVGEP
IMYPEINRLLKLLHQRGISSFLVTNAQFPEEIRNLTPVTQLYVSVDASTKDSLKKIDRPL
FKDFWQRFLDSLKALAAKQQRTVYRLTLVKCWNVDELRAYAELVSLGNPDFIEVKGVTYC
GESAASSLTMANVPWHEEVVRFVQELVDLLPDYDIACEHEHSNCLLIGHKKFKVNGEWWT
WIDYSRFQELVLQYEQSGGSKAFSASDYMARTPPWALFGARERGFDPKDTRYQRKNKAKD
ISGC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctctggatgtgtgggacttttcttcacctttgctgttgctgtgggtgaacagg
ttctacatctatctgggctgtgctctgggagtcactctttggatctgtgtccaggttgtc
atcaagaagcaggtcactcgctcccaggagaaaagtgtccctggagctcccggcaactca
ctctcccttcagaagaaggagtcacacgtgtctggagtgaagattttctacggatcacag
accggcactgccaagggatttgcagtgactcttgccaaagcagtcacctctctggacctg
cctgtggccgttattaatttgaaggactatgatccagacgacagtctgataggagagatc
actagtaaaaatgtctgtgccttcctgcttgctacatacacggacggccgccctactgag
agtgcagagtggttctctaagtggctggaggaggcggctaatgatttccgcttcggcaaa
acttacctcaaaggtctgcgatatgcagtgtttggcttgggagactctgcctaccggagc
cacttcaacaaggtcagcaccaatgttgacaaatggctctggatgctcggcgcccagcgg
gtgctcacccgaggggagggagatcgcaatgcagttcagagcaaacacggcagcatcgag
gctgacttcacagcctggaagaccaagttcatcgcccggctgcaggccctgcagacgggg
gagaagaagaagacctgtagtggggactgcaagagggggaagtgcgagtccacccagcca
ggcgcaggagagacgcgccctcacctgcagggcgaattgcaccccagggatgcagaggag
gaagagccctgcgagagcagcagtgaggaggagtcggggacccaggattaccagagcctg
agttccgtggtggatgtcgaggacctgggcaacatcgtgaaccccttgaagaaggaaaag
agagaaaaggctccacaggaggagagaggtggcgtgaagaggaacccggagaggagcgaa
gacagcgaaggaagagctatgatcacgcctgctctccgagaggccctaactaagcaaggg
taccagttgattggcagccactccggtgtgaagctttgcagatggacaaagtcaatgctg
cgggggagaggaggttgctacaaacacacattctacggcatcgagagccatcgctgcatg
gaagccaccccgagcttggcgtgtgcaaataaatgtgtcttctgttggcggcaccacacc
aatcctgtgggcactgaatggcggtggaagatggaccagccagaactgatcttgaaggaa
gccattgagaaccaccagaacatgattaaacagttcaaaggcgtgccagggctcaaggca
gagcgattcgaagaggggctggaggtcaagcactgtgcactgtcgctcgtgggagagccc
ataatgtacccagagatcaaccggcttctgaagctgctccaccagcgtggcatctccagc
ttccttgttaccaacgcgcagttccccgaggaaatcaggaacctcacgccagttactcag
ctgtacgtgagcgtggatgccagcaccaaagacagcctcaagaagattgaccgcccactc
ttcaaagacttctggcagcggttcctagacagtttgaaagccttagccgcaaagcaacag
cgaaccgtctacagactgacacttgtgaagtgctggaacgtggatgaactccgggcctat
gctgagctggtgtccttggggaaccccgacttcatcgaggtcaagggcgtgacctactgt
ggcgagagcgcagccagcagcctcaccatggccaacgtgccttggcacgaggaagtggtc
cgctttgtccaggagctggtggatctgcttcccgactacgacattgcatgtgaacacgag
cactccaactgcctcctgatcggacacaaaaagtttaaggtcaatggagagtggtggacg
tggatcgattacagccgcttccaggagctcgtcctgcagtacgaacagagtggaggctca
aaggcgttcagtgcgagcgattacatggccagaaccccaccgtgggcactgttcggtgcc
agggagagaggctttgatcccaaggacacgaggtaccagaggaagaacaaagcgaaggac
atctcgggatgttga
DBGET
integrated database retrieval system
