Peromyscus leucopus (white-footed mouse): 114695830
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Entry
114695830 CDS
T07241
Symbol
Frem1
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114695830 (Frem1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
114695830
NCBI-ProteinID:
XP_028729125
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All DBs
Position
2:complement(89977824..90128580)
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AA seq
2173 aa
AA seq
DB search
MNSPGCIGPKALLFLLFPLLLDLANSTFISINRGLRVMKGSSAFLSEDHLKFAIPKEKDA
CRVEVVMNEPITQRVGKLTPQVFDCHFLPNEVQYVHNGCPILDEDSVRLRLYRFTETDTF
METFLFRVHLVEPDCNIIRLSRNMLEVTEFYGLSQAIDKNLLQFDYDRTANLDCTIRLDP
VVTQLPAHGKLVVLNRKPEGPRGDQPHSFFPETQLGAGLKCPGGSCALGLEKVGSLKVSC
EEFLLMGLHYQHTQPPSPNVDYIAIQLDLTDRRSKATYKSERVWLPVSIRVGIPNQAPRA
AFMAMFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLLDHTRPISS
FTWKDLSHMQVAYQPPNSSYPERRHYKVELEVYDFFFERSAPITVHISIRTADTNAPRVS
WNTGLNLLEGQSRVITWEQFQIVDNDDIGAVQLVTIGGLQHGRLTVREGKGFLFTVADLQ
AGVVRYHHDDSDSTKDFVALRIFDGQHSSQHKFPINILPKDDSPPFLITNVVIELEEGQT
VLIQGSMLRASDMDSSDDYIFFNVTKSPQAGEIMKKPGPGLIGYAVPGFLQRDLFNGIIY
YRHFGGEIFEDSFEFVLLDSCDPPNLSVPQMVTIHISPVDDQLPKEAPGISRHLVVKETE
VAYITKKHLHFLDTETHNGELVYTITRPPCFSFSHRHLDAGKLFMVDSIPKLIKNPTALG
LRSFTQHAVNHMKVAYMPPMQDIGPSLRHVQFTVSVSNQHGGTVHGICFNITILPVDNQV
PEVFTNTLRVVEGGQCTISPDSILVSDVDTPLDSISLSLQEMPLHGRVELDGFPLNPRGT
FSWRDLNTLKVRYHHDGSEVFQDEIFLEVTDGTNSAEFVLHIEVFPVNDEPPVLKADLIP
MMHCSEGGEVTITPEYIFATDADSDDLKLLFLITREPQHGVVRKAGNHVDRFSQGDVISG
AVTYKHTGGEVGPAPCFDTVILVVSDDEAGPSVNGCCYNGPDPSVPRHESFPMYELNITV
HPVDNQPPSIIIGRTFVVDEGFQAALTTHHLTATDPDTAPDDLEFVLVSPPQFGYLENTL
PSAGFEKSNMGISIASFQWRDMKALHINYVQSRHLRVEPTADQFTVYATDGKRRSLETTF
HVNINPTNDEAPDFVVQNITVCEGQMVELDSSVITAADRDVPKDLLLFSITHKPQHGLLI
NVAISKESPQIKQLKHEVYNXFSMDVLKTGMKLAYVHDDSESLADNFVIQLSDGKHKILK
TVSVNITPVNDEKPTLSKKAEISMAVGETRVLSSAVLSAIDKDSPRETIHYLFERLPQNG
QLQLKIGRDWVPLSAGMQCTQEHVDLNLLRYTHTARMESQDGDSFTFYLWDGDNRSPAFD
CHIIIEDTGKGDIVIYAKPLVVAKGDRGFLTTATLLAVDGADKPEELLYLITSPPQYGQV
EYVHYPGVPITSFSQMDIAGQTVCYVHKSKAAIPSDSFRFTISNGLQTQRGAFEITLETV
DRALPVVTRNKGLKLAEGAEGFLSADHLQLTDPDTPPENLTFLLAQLPRHGYLYLRGKVL
HHNFTQQDVDSRGVAYQHSGGGSRADCFTFLATDRKNQGFVVNGKVQKEPVLFTIQVDQL
DKAAPRITRLHSPSQVGFLKNGCYGIYITSHVLKASDPDTEDDQIIFKILRGPLHGHLEN
TTTGEFIHEQFSQKDLSRKTILYVINPSLQVNSDILEFQIMDPAGNTATPQSLELKWSYI
EWFQTEYEVCENVGLLPLEVTRRGYSMDSAFVGIEVNQVSAVVGKDFTVTPSKLIQFDPG
MSTKMWNIAITYDGLEEDDEVFEVILKSPVNAVLGTKTKAAVKILDSKGGRCHPSNSFNR
SKHSTWGKGIWRLPPPGSSSLTTAGSPHLERGPPPSSTKGDALGGFDHTDLSQRKMRTRG
NGQSVHPSSVCRNGTDTIYNYHGIVSLKLDSDSASAHQQKARMSVISRPQKTIKEAELPP
ADKVESTTDSHFPRQGQLPLFPKNCSVELKGLFHLEESIHRLYLCDGIAWKAWSPQTKGL
EDKSCPAGWHLHSGYCHTLVTQRKGTWTSATQACREQHQGNLVTVLSRRHMQWLWEISGR
KPFWIGLKNQAHTGLWEWIGGEPVAFTNWRRGXPQHPKPGKNCVLVHKRGQWQSKNCSKG
KTHNFVCSRKLRI
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgaactctccgggttgtattgggcccaaggccctgctgttcttgctcttcccactgctt
ctggacctggccaattccaccttcatcagcatcaaccggggcctgagggtgatgaagggc
agttctgccttcctgtctgaagatcatctgaagtttgccatccccaaagagaaggatgcc
tgtcgagtggaggtggtgatgaatgagccgataacccagagggttgggaaactcactcca
caggtcttcgattgccatttccttccgaacgaagtacagtatgttcacaacggatgccca
attctcgatgaagactccgtgaggcttagactttacagatttactgaaactgacaccttc
atggaaacctttctctttcgagtccatcttgtggagccagactgtaacatcatccgtcta
agcaggaatatgctggaagtgactgaattctatggcttatcccaagccattgataagaac
ctgctccagtttgattatgataggacagccaacctggactgcaccatcagactggaccca
gtggtcactcagctgccagcccatggcaagctggttgtgctgaatcgtaagccagaggga
cctcgtggagatcagccccacagctttttccctgagacccagctgggggcaggactgaag
tgtccaggtggaagctgtgccctgggcctggagaaagtgggaagtctgaaagtgagctgt
gaggagttcctgctgatggggcttcactaccaacacacacaacccccttcgcccaacgtt
gattacattgccatccagctggatctcacggaccgaaggagtaaagccacgtacaagtca
gagcgcgtgtggttgcccgtctctattagagtcggcattcctaaccaggccccgagggct
gcattcatggccatgtttgtcctggaggtggaccaattcatcctgacccccctgacaacc
tcagttctggactgtgaggaagatgagacccccaaacccttgttggtgttcaacatcacc
aaagccccgctccagggctatgtgacccacctgctggatcacaccagacccatctcttca
ttcacctggaaggatctaagtcacatgcaagttgcctaccagccaccaaacagcagctat
ccggagaggagacattacaaggtggagctggaggtgtacgacttcttctttgagaggagt
gcccccatcactgtgcacatctccatcagaacagcagacacaaacgcgccccgggtgtcc
tggaatacaggtctgaatctcctggaagggcagtctcgggtcatcacctgggaacagttt
cagatcgttgacaatgacgacattggtgctgtgcagttggtcaccattggtggcctgcag
catggacgtcttacagtaagagaggggaaaggatttctcttcaccgtggctgacctgcag
gctggagttgttcgctatcatcatgacgacagtgactctactaaagactttgtggctctc
aggatattcgatggccagcacagcagccagcacaagttccccatcaacatcttgcctaaa
gatgatagcccccccttcctcataaccaatgttgttattgagctagaagagggccaaacc
gtcttgatccaagggtccatgctgagagcttcagacatggactccagtgatgactacatc
ttctttaatgtcaccaagtccccacaggctggggagatcatgaagaagccagggccagga
ctgatagggtatgcggtccctggcttccttcagagagacctgttcaatggaatcatttac
tatcgtcacttcggtggagaaatctttgaagactcttttgaatttgtcctattggacagt
tgtgaccctccaaatctctcagtgccacagatggtgacgatccatatctctccagtagat
gaccagcttccaaaagaagctcctggcatttcccggcatttggttgtcaaggaaacagag
gtggcctacatcactaaaaagcacctacatttcctagatacagaaacacacaacggggag
ctcgtctacacaataacacgtcctccgtgtttctccttcagccacagacacttggatgct
gggaagttatttatggtggacagcataccaaagctgatcaaaaatcctacagccctgggg
ctgagatcatttacccagcatgctgtgaaccatatgaaagtggcctacatgccacccatg
caagatataggtcccagtcttcgacacgtgcagttcacggtgtctgtcagtaaccagcat
ggaggcactgtgcatggaatctgcttcaacataaccattctcccagtggacaatcaggtt
cctgaggtattcaccaacaccctgagagtggtcgagggtggtcagtgcaccatcagtcca
gactccattttggtttctgacgtggacaccccactggacagcatcagcctctctcttcag
gagatgcccctccatggcagggtagagctggatggatttcctctaaacccaagaggcaca
ttttcatggagagacctcaataccttaaaagttaggtatcaccatgacggatctgaggtt
tttcaagatgagatattcttggaggtcacagatggcacaaattcagcagaatttgttcta
cacattgaggtattccctgtgaatgatgagccacctgttctgaaggctgacctgatcccc
atgatgcattgctcagagggtggagaggtgaccatcacccctgaatacatttttgctact
gatgcagacagtgatgacttgaaactgctgtttctgattacccgagagccgcagcatggg
gtggtgagaaaggctggaaaccatgtggacaggttctctcagggagatgtcatctcagga
gctgtgacatacaaacacacaggtggtgaggttggcccagcgccttgttttgacaccgtt
atattggtggtttcggatgatgaagccggcccttcggtgaatggctgttgctacaatgga
cctgatccatctgttcctcgtcatgagtcctttcccatgtatgagctcaacatcacagtg
catccagttgacaaccagccaccttcaattataataggtaggacgttcgtggtggatgaa
ggcttccaggcagcccttaccactcatcatttgactgccactgacccagacaccgcaccg
gatgacttagaatttgttttggtttctcctccccagttcggctatcttgaaaacacactc
ccttctgcaggttttgagaaaagtaacatgggcataagcatagcttcgttccagtggaga
gacatgaaggctttgcacattaactacgtgcagtccaggcacctgagggtggaaccaact
gccgaccagttcacggtgtatgccacagatgggaagcgacgctccttagagacgacattt
catgttaacatcaaccccacaaatgatgaagctcccgactttgtggtacagaatatcact
gtgtgtgagggtcagatggtagagctggattcttccgtcatcactgctgctgacagggat
gttcccaaggacctcctgctcttcagcatcactcacaagccccagcatggcctcctcatc
aatgtggcgatcagcaaagagtctcctcagatcaagcagctgaaacatgaagtttacaat
nncttctccatggacgttctcaagactggaatgaaactggcctacgtccatgacgactcg
gagagccttgctgataactttgtgatccagttgtccgatgggaaacataaaatacttaaa
accgtttcagtaaatatcaccccagtgaatgatgagaaaccaacgctgagcaagaaggct
gaaatctcaatggccgtaggcgaaactcgtgttctatctagtgctgttctgtcagccata
gataaagactcacccagggagacgatccactatttatttgaaagacttccccaaaatggg
caacttcagcttaagataggaagagactgggtccctctctcggctggcatgcagtgcacc
caggagcatgtggacctgaacttgctgagatacacacacaccgccaggatggagtcccag
gatggagacagttttaccttctacctctgggacggggacaacagatcacccgcgtttgac
tgtcacatcatcattgaagacactgggaaaggtgatattgtcatttatgcaaaaccgctc
gtggtggccaaaggtgacagaggtttcctgacgactgccactctcctggctgtggatgga
gcagacaagcctgaggaactactctacctcatcacttccccaccacagtacggccaggtg
gagtacgtccactatcccggagtccccattaccagctttagccaaatggacatagcagga
cagacagtctgctatgtacacaagagcaaggcagccatccccagtgacagcttcagattt
accattagcaacggactgcagacccagcgtggggcgtttgagatcacactggagactgtg
gacagagctttgcctgtggtgaccaggaacaaagggctgaagctggccgaaggggcggag
ggcttcctgtccgctgatcaccttcagctgaccgaccctgacacacctccagagaaccta
accttccttctggcccagctcccacgccatgggtacctctacctgaggggaaaagtgctt
caccataattttacccagcaagatgtggacagcaggggtgtggcctatcagcactccgga
ggcggctcccgggcggactgctttactttcctggccacagacaggaagaaccaaggcttt
gttgtgaatgggaaagttcagaaagagcctgttctcttcactatccaggtggaccagttg
gacaaagcggcaccccggatcacacgcttgcactccccttctcaagtggggttcttgaaa
aatggctgttacgggatttacatcacttcccatgtgctgaaggcatcggaccccgacaca
gaggatgaccagatcatctttaagattttacgaggcccattgcatggacatctggagaat
acaaccacaggtgaatttatccatgagcaatttagccagaaggacttaagcaggaagacc
attctttacgtcataaacccatctttgcaagtgaattccgatatcctggaatttcagatc
atggaccccgcagggaacactgccactcctcaaagcttggagctgaagtggtcttatatt
gaatggttccagactgaatatgaggtctgtgagaatgtgggcttattgcccttggaagtt
accagaaggggatattccatggactcagcctttgtgggcatagaggtcaaccaagtgtca
gctgtagttgggaaagattttacagtcacgccatccaaactgatccagtttgacccagga
atgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagatgatgag
gtctttgaagtaattctgaagtcccctgtgaatgcggttcttggcacaaagacaaaagct
gcagtgaaaattttggactcaaaaggaggacggtgccatccttcaaattccttcaaccga
agcaagcacagcacatgggggaagggcatttggcgtctgccgcccccagggtcatcctca
ctcaccactgccggttctcctcatctggaaagagggcctcctccatcttccaccaaagga
gatgcccttgggggctttgatcacacagacctctctcaaaggaagatgaggacccgtggg
aatggccaatcagttcatccatcttccgtttgtagaaatggaacagacaccatctacaat
tatcacggcatagtctccttgaaactagacagtgacagtgcctcagctcaccaacagaag
gccagaatgtccgtcattagtaggccacaaaagacaatcaaggaggcagaactacctccg
gctgataaggtggaatccacaactgactcacacttccccagacagggtcagctgcccttg
tttccaaagaactgttctgtggaattgaagggactgtttcatttggaagaaagcatccac
agattgtatctatgtgatgggattgcctggaaagcctggagcccccaaaccaaggggctg
gaggacaaatcctgcccagctggatggcatctgcactcaggctactgtcacaccctggtc
acacagcggaaaggcacctggacctcagcgacccaggcttgcagagaacagcaccagggc
aaccttgtgaccgtactctccaggaggcacatgcagtggctatgggaaatcagtggaaga
aagcccttctggataggcttgaagaatcaagcacacactggcctctgggagtggattgga
ggtgaacctgttgctttcaccaactggaggagagggnaccctcagcacccaaagcctggg
aagaactgtgttttggttcacaaaagaggacaatggcagtctaagaactgtagtaaaggc
aagactcacaattttgtgtgctcaaggaaactccgaatataa
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