Peromyscus leucopus (white-footed mouse): 114699629
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Entry
114699629 CDS
T07241
Symbol
Ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pleu03009
]
114699629 (Ddx54)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114699629 (Ddx54)
Ribosome biogenesis [BR:
pleu03009
]
Eukaryotic type
Pre-60S particles
Helicases
114699629 (Ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
114699629
NCBI-ProteinID:
XP_028734606
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All DBs
Position
23:11871499..11886798
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AA seq
874 aa
AA seq
DB search
MAAGRRVGPGPRSRASMAPWKKKGLRKRRSGASQARDSDSEDGEFEIQAEDDARARKLGP
GRALPSFPTSECVSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTP
IQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQ
TMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQSV
EYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL
DVDTKLNEQLKTSFLLVREDTKAAVLLYLLRNVVRPQDQTVVFVATKHHAEYLSELLTAQ
GVTCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKL
FLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSITLARPHEEPSGAVGQDGVLG
RVPQSVVDDEDGGLQTALEASLELRGLHRVADNAQQQYVRSRPAPSPESIKRAKELDLAG
LGLHPLFSSRFEEGELQRLRLVDSIKNYRARTTIFEINASSRDPSSQMMRAKRQRDRKAI
ASFQQGRHVRQEGPADPVPQKEPPQKEEEDEDMADSVQDVFTEVVGQKRPKPGPNRGAKR
RREEACQRDQEFYVPYRPKDFDSERGLSVSGTGGAFEQQVASAVLDLMGDEAQNMSRGRQ
QLRWDRKKKRFVGQSGQEDKKKIKTESGRFISSSYKRDLYQKWKQKQKIDDRDSEEEGPS
NQRGPGPRRGGKRGRSQGASLPRAPGAPAGRPRSELKTKEQILKQRRQAQKQRFLQRGGL
KQLSARNRRRAQELRQGAFGRGAPSRKGKMRKRM
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcagacgcgtgggtcccggcccgcggtcgcgtgcctccatggcgccgtgg
aagaagaaggggctgcggaagcgccggagtggggcttcccaggcccgcgacagcgactcg
gaggatggcgagttcgagatccaggctgaggatgacgctagggcgcggaagctgggccct
ggccgagccttgccctcctttcctacctcagagtgcgtatcagacgtggagcccgacacc
cgggagatggtgcgagcccagaacaagaagaagaagaagtctggaggcttccagtccatg
ggcttgagctaccccgtgttcaaagggatcatgaaaaagggctacaaagtgccaacgccc
atccagaggaagaccatccccgtgatcttggacggcaaggacgtggtggccatggcccgg
acaggcagcggcaaaacagcctgcttcctcctcccgatgtttgagcggctgaaagcgcgc
agcgcacagacaggggcccgggccctcatcctctcgcccacccgggagctggccctgcag
accatgaagttcactaaagagctgggcaagttcaccggcctcaagacagccttgatcctg
ggcggggacaaaatggaagaccagttcgctgccctgcatgagaaccctgacataatcatt
gctacccctgggcggttgatgcacgtggctgtggagatgaacttgaagctacagagtgtg
gagtacgtggtttttgatgaagcagacaggctctttgaaatgggcttcgctgaacagctc
caggagatcataggccgccttcctgggggccaccagacagtgctgttctcggccacgttg
cccaaactgctggtggaatttgcccgggcaggtctcacagagcctgtgctcatccgtctg
gatgtggacaccaagctcaatgagcagctcaagacctccttcctccttgtacgagaggac
accaaggccgctgtgcttctctatctactgcgtaatgtcgttcggccccaggaccagacg
gtggtgtttgtagccacaaagcaccacgcagagtacctctcggagttgctgacggcccag
ggtgtgacctgcgcccacatctacagcgccctggaccagacggcccgcaagatcaacctg
gcgaagttcacacacaacaaatgttccaccctcatcgtgaccgacctggccgcccggggc
ctggacatccccctgctggacaacgtcatcaactatagcttccccgccaagggcaagctc
ttcctgcatcgtgtgggccgtgtggcacgagcaggccgaagtggcacagcgtattctttg
gtggccccagatgaggtcccctacctgcttgacctgcacctgttcctgggccgctccatc
accctcgcccggcctcatgaggagccctcaggtgcagttggccaggacggcgtgctgggt
cgggtgccacagagtgtggtggatgatgaggacggcggcctgcagactgccctggaggcc
tccctggaacttcggggcctgcaccgcgtggccgacaacgctcagcagcagtacgtgcgc
tcacgtccagcgccctcacccgagtccatcaagagagccaaggagctggacctggcgggg
ctgggcttgcacccactcttcagctcccgatttgaggagggggaactgcagcgccttagg
ctggtggacagtatcaagaactaccgcgcccgcacaaccatctttgagatcaatgcctcg
agccgggacccaagcagccagatgatgcgtgccaagcggcagagggaccggaaagctatc
gccagcttccagcagggacggcacgtgaggcaggagggcccagctgacccagtcccccag
aaggagccgcctcagaaggaagaggaagacgaggacatggctgacagtgtgcaggatgtc
ttcacagaggtggtgggccagaagcggccaaagccaggacccaaccgaggagccaagagg
cggagggaggaggcctgtcagcgagaccaggagttttacgtcccctaccggcccaaggat
ttcgacagtgagcgggggctgagcgtcagtgggactggaggggcctttgagcagcaggtg
gctagtgcggtccttgacctgatgggggatgaagcgcagaacatgagccgaggtcggcag
cagctcaggtgggatcggaagaagaagcggtttgtggggcagtcaggccaggaggacaag
aagaagatcaagacagagagtggccggtttatcagcagctcctacaagcgtgacctctac
cagaagtggaagcagaagcagaaaatcgatgaccgggactctgaggaagaagggccctcc
aaccagcgaggcccggggccccgcagaggtggaaagcgagggcggagtcaaggtgcatct
ctgccccgagcgcccggcgcccccgcaggccgcccgcgctcagaactcaagaccaaggaa
cagatcctgaagcagcggcgtcaagcccagaagcagcgcttcctacagcgcgggggcctg
aagcagctctcagcccgcaaccgccgccgagctcaagagctgcgccagggcgccttcggc
cggggtgccccttcgaggaagggcaagatgaggaagaggatgtaa
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