KEGG   Peromyscus leucopus (white-footed mouse): 114699701
Entry
114699701         CDS       T07241                                 
Symbol
Ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
  KO
K17985  activating molecule in BECN1-regulated autophagy protein 1
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu04137  Mitophagy - animal
pleu04140  Autophagy - animal
pleu05010  Alzheimer disease
pleu05014  Amyotrophic lateral sclerosis
pleu05016  Huntington disease
pleu05017  Spinocerebellar ataxia
pleu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    114699701 (Ambra1)
   04137 Mitophagy - animal
    114699701 (Ambra1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    114699701 (Ambra1)
   05014 Amyotrophic lateral sclerosis
    114699701 (Ambra1)
   05016 Huntington disease
    114699701 (Ambra1)
   05017 Spinocerebellar ataxia
    114699701 (Ambra1)
   05022 Pathways of neurodegeneration - multiple diseases
    114699701 (Ambra1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pleu04131]
    114699701 (Ambra1)
   03029 Mitochondrial biogenesis [BR:pleu03029]
    114699701 (Ambra1)
Membrane trafficking [BR:pleu04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    114699701 (Ambra1)
Mitochondrial biogenesis [BR:pleu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    114699701 (Ambra1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A Acyl_CoA_thio
Other DBs
NCBI-GeneID: 114699701
NCBI-ProteinID: XP_028734771
LinkDB
Position
4:67493647..67702532
AA seq 1300 aa
MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSMERPRTSAYIRLRQRVSYPTTV
ECCQHPGILCLCSRCAGTRVPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQ
QDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEW
TRTVLTLNSRSEVESMPPPRTSASSVSLLSVLRQQEGSSQASVYTSATEGRGFPPSGLAT
ESDGGNGSSQNNPGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIE
SERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSS
WHVSTTFEGMPPSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGHWER
IYTQPNRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPA
RLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSSSSSSSDNQGPSVEGADLEFEDF
EDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVL
AGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISA
DGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVG
LASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPE
PGLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTD
RDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEEPGTASSGPGEGEGSE
YGGSGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESG
AARTSSPQPSTSRGLLSEPGQLAERGLSPRTASWDQPSTSGREPPQSALLSSSPVPIPVP
LASNEGPTMHCNVTNNSHLPEDDGSSRGEAAGPSGEPRNR
NT seq 3903 nt   +upstreamnt  +downstreamnt
atgaaggttgtcccagagaagaatgctgtccggatcctctggggccgagaacggggcact
cgtgccatgggtgctcagcgacttctgcaggagctggtggaagataagactcgatggatg
aaatgggagggcaagagagtagaactgcctgatagtccacgctcaaccttcttactggcc
ttcagcccagacaggactctcttggcatccacacatgtgaaccataacatctatattaca
gaggttaagactggcaagtgtgttcactctctgattggacaccgccgtactccatggtgt
gtcacttttcatcccaccatctcaggccttattgcttctggctgcctagatggggaagtt
aggatttgggatttacatggtggcagtgaaagctggttcacagatagcaacaatgccata
gcgtccttggctttccatcctacggctcagcttctactgattgccactgccaatgagatc
cacttctgggattggagtcgacgggagccctttgctgtggtgaagacagctagtgagatg
gaacgcgtccgtctggtgagatttgatccacttggacactacttactgacagcaattgtt
aacccttctaatcagcagggtgatgacgaaccagagatccctatagatggaacagaatta
tctcactaccgccagcgtgccctcctgcaatcacagccagttcgccggacacctctcctt
cacaattttctgcatatgctgtcctcccgctcctctggcatccaggtgggagagcaaagc
acagtacaagattctgctaccccctcacccccaccgcctccccctcagccctccatggag
cgccccaggacttccgcttacatcaggctccgacagcgggtcagttaccccaccacagtt
gagtgctgccagcaccctgggatcctgtgcctttgcagccgctgtgctggcactcgagtt
ccttccctcttgccacaccaggacagtgtcccccctgcttctgccagagctactacccct
tccttttcttttgtacagaccgagcccttccatcccccggagcaggcttcatcaacgcag
caggaccagggcctcctgaaccggccgtctgccttcagtacagtccagagcagcactgcg
ggcaatacgctccgcaacctcagtctgggtcctacccgccgctctttggggggccctttg
tctagccacccttctaggtatcacagagaactagcccctgggctgacaggttctgagtgg
acccggacagtactcactctgaactcccgctccgaggtagaatctatgcccccgcccagg
accagcgcctcctcagtgagcctgctgtccgtgctgagacagcaggagggtagctctcag
gcgtctgtgtacacttcagccacggaaggaaggggttttccaccctcaggactggctact
gagtcagacggaggcaatggttctagccaaaacaacccgggcagcattcgccatgagctt
cagtgtgacctgagacgcttctttttggagtatgacaggctgcaggaactggatcagagc
ctgagtggggaagctccccagacccaacaggcccaggaaatgctcaacaataacattgaa
tctgagaggccaggtccttctcatcagcccaccccacacagcagtgagaacaactctaac
ctgtctcggggccatcttaatcgctgccgtgcttgccataatcttctgaccttcaacaat
gatactctgcgttgggaaagaaccacacctaactactcatctggcgaggctagctcttcc
tggcacgtctctaccacctttgagggcatgccaccaagtggcagccagttgccacctctt
gagcggactgagggccaaacacctagctccagcaggctggagttgagcagctcagctagt
ccacaagaggagaggactgtgggggtggcctttaaccaggaaacaggccactgggaacga
atttatacccagcccaacagatctggaactgtatcacaggaggccttacatcaagatatg
cctgaagaaagctctgaggaagactccctcaggaggaggctgctggagtcttccctcatt
tcattatcccgttatgatggagcaggatccagagagcacccaatttacccagacccagcg
agattatctcctgctgcatactacgcccagaggatgatccagtatctctcacggagagac
agtattcgccagcgctccatgcgctaccaacagaatcgccttcgttcttcctcctcctcc
tcttcctcagacaaccagggtccgtcagtagagggagccgacttggaatttgaggacttt
gaggacaatggtgacagatctaggcaccgagctccccgcaatgcccgaatgtctgcacct
tcacttggacgctttgtcccaaggcgttttttgctgcctgagtacttgccttatgctggc
atttttcatgaacgtggacagcctggcttggctactcactcttctgttaacagggtcctg
gcaggggccgtgattggagacggacagtctgctgtggccagtaacattgccaatactacc
taccggcttcagtggtgggacttcacaaagtttgaccttccagagatcagcaatgcctcc
gtgaatgtcctggtacagaactgcaagatctacaatgatgccagctgtgacatttctgca
gatggccagctcttggcagctttcattccgagcagccaaaggggctttcctgatgaaggc
atcctggcagtgtattccctggccccccataacttgggggaaatgctctacaccaagcga
tttggtcccaatgccatttctgtaagcctgtctccaatgggccgatacgtaatggtgggc
ttggcctcacgaaggattttgctgcacccctccacagagcacatggtagcccaggtcttc
aggctgcaacaggcccatggtggtgagacctccatgaggagagttttcaacgtcctttac
cccatgcctgctgaccagcggagacatgtcagcatcaactctgcccgttggctacctgag
ccagggcttggtttggcctatggcaccaacaaaggagacctggtgatctgccgaccagag
gccttaaactctggtgttgagtactactgggaccagctaaatgagacggtcttcactgtc
cactcaaacagcaggagcagcgagcggcctggaaccagtagagccacatggcggacagac
agagacatgggtttgatgaatgcaatcgggctgcaacctcggaaccctaccacctctgtg
acatctcagggcacccagactctagccctccagttgcagaatgctgaaacacagactgag
agggaggaagaggaaccagggacagcatcctcaggtcctggtgaaggcgagggctccgaa
tatggcggcagtggggaagacgccctcagccggatccagaggttaatggccgagggtggc
atgacagctgtggtacagcgagaacagagcaccaccatggcctccatgggtggcttcggc
aacaacatcatcgtcagtcaccgcattcaccgcagctcccagacaggcacagagtcaggc
gctgctcgtacctcctcaccccagccctccacctctcggggactgctctcagaacctgga
caactggcagagcgaggcctaagcccccggacagcttcctgggaccagcctagtacctct
gggagggaaccacctcagtcagctctactgtcttcctcccctgtccccattccagtcccc
cttgccagcaatgagggaccaaccatgcactgcaatgtgaccaataacagtcaccttcct
gaggatgatggcagcagcaggggggaagctgcaggccctagtggggagccacggaaccgg
tag

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