Peromyscus leucopus (white-footed mouse): 114702439
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Entry
114702439 CDS
T07241
Symbol
Btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114702439 (Btaf1)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114702439 (Btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
Vac14_Fab1_bd
HEAT_2
Cnd1
UTP20_C
Motif
Other DBs
NCBI-GeneID:
114702439
NCBI-ProteinID:
XP_028738712
LinkDB
All DBs
Position
1:44043506..44135628
Genome browser
AA seq
1848 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQEPTESSMEDSSTTDRLNFDRFDICRLLQHGASLLGS
AGAEFEVQDEKPGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTSA
ALVNKQSTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDGE
PEEKRRKVANVVVNQTANDSKVLIDNVPESSSLIEETNEWPLESFCEELCNDLFNPSWEV
RHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSD
EVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQ
DVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPSIINTLWDSLL
ELDDLTASTNSIMTLLSSMLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALETL
FTLLSTQDQNSSSWLIPILSDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVVA
AACPWMGAWLCLMMQPSHLPIDLNMLLEVKAKAKEKTGGKVRQGQIQNKEVLQEYIAGAD
TVMEDPATRDFVVMRARMTAAKLLGALCCCICDPGVNMVNQEIRPAESLGQLLLFHLNSK
SALQRISVALVICEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQF
LSSLADAHIEVGNRINNNVLTIDQANDLVTTVFNEVTSTFDLNPQVLQQLESKRHQVQMT
VAETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQCI
AKLLQQCTTRSPCPNSKVIKNLCSSLCVDPYLTPCVTCPVPTQSGQENSKGSNSEKDGMH
HTVTKHRGIITLYRHQKAAFAITSRRGPIPKAIKAQIADLPAGSSGNVLVELDEGQKPYL
VQRRGAEFALTTIVKHFGAEMVVKLPHLWDAMVGPLKTMIDLNNFDGKSLLERGDGPAQE
LVNSLQVFEIAAASMDSALHPLLVQHLPHLYMCLQYPSTAVRHMAARCIGVMSKIATMET
MNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDS
VRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQMKAKERHFLEQLLDGKKLENYKIPVP
INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQEYARSKL
AECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKRHNLIVA
SYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVL
ELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLL
RRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKPK
LKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQ
LLLDCGLGNGSTSDSGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSI
PPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAH
RIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLD
KDGKAEKADSSTSGKASMKSVLDNLSDLWDAEQYDSEYNLETFMRSLE
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccagacttgatcgtctttttatcttattggatactggtactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtagtgaagcttcatcctcatgaacta
aataatttgttatctaaggtattaatatacttaaggagtgcaaattgggatacccgaatt
gctgcaggacaagctgttgaagctatagtgaaaaatgtgcccgagtggaatccagtgcca
agaaccaaacaagaacctacagaaagttctatggaagattcatctactacagatcgatta
aattttgacagatttgatatatgcagattgttacagcatggtgcatcacttttggggtct
gctggtgcagaatttgaagtccaagatgaaaaaccaggtgaagtggatcctaaagagaga
atagcacgtcaacggaaattattacagaagaaacttggacttaatatgggagaagcaatt
ggaatgagtactgaagagctcttcaacgatgaagatttggattataccccaacttcagca
gcccttgtaaacaaacaatctactctccaggctgctgaattgatagattcagaattccga
gcaggaatgagtaatagacagaagaacaaagctaaaagaatggccaagttatttgcaaaa
cagagatccagggatgcagtggaaacaaatgagaagagcaatgatagcactgatggagag
ccagaagaaaagagacggaaagtagcaaatgttgttgttaaccagactgcaaatgattcc
aaagtcttgattgataatgttccagaaagttcttctttaattgaggagacaaacgaatgg
cctttggaaagcttctgtgaagaactttgcaatgacctttttaatccctcctgggaggtt
cgacatggggcaggtactggacttagagaaattcttaaagctcatgggaaaagtggtggt
aaaatgggagacagcactttagaagagatgattcagcagcatcaagagtggttggaggat
ttagtcattcgactcctttgtgtttttgccttggacagatttggagactttgtttctgat
gaagttgtagcaccagtccgtgaaacttgtgctcaaacattaggtgtggttttaaagcac
atgaatgaaacaggagttcataagacagtggatgtgctgctgaagttactgacccaagaa
cagtgggaagttagacacggcggtctgctggggataaagtatgctctggcggtccgtcag
gatgtaattaatactttattgcctaaagttttaactcgaataattgaaggactccaggac
cttgatgacgacgtcagagctgttgctgcagcatccttagtgcctgtagtagaaagcctt
gtctaccttcagacacaaaaggtaccctccattataaataccttatgggattctctcctg
gaattagatgatctaacagcttcaacaaatagtattatgactcttctttcatccatgtta
acttaccctcaggtccagcaatgcagtattcagcagtcacttacagttttagttccccgt
gtctggccatttttgcatcacactatatcttcagttcgaagagcagcattggaaactctc
tttacattgttatcaacacaggaccagaactcttcatcttggcttatacccatcctgtct
gatatgctgcgacacatttttcagttttgtgttttagaaagcagccaggaaattctggat
cttattcacaaggtttggatggaactgttgagcaaggcttcagttcagtatgtggtagca
gctgcttgcccatggatgggtgcttggctttgcttaatgatgcagccttctcatttacct
attgacttaaatatgttgctagaagtaaaagctaaagccaaggaaaaaacaggtggtaag
gtacggcaaggccaaatccagaataaagaagtgcttcaggagtatattgcaggtgcagac
acagtcatggaagacccagctaccagggattttgtagttatgagggccaggatgacggca
gctaagttgttaggagcactttgttgctgtatttgtgatccaggtgtaaatatggtaaac
caagaaattagaccagcagaatctcttggccagttacttctgttccatctgaactccaaa
tctgctttacagagaattagtgttgcattagtaatctgcgaatgggctgctttacaaaag
gagtgtaaagctgttaccctagctgtgcagccacgtttgcttgatatcctttcagaacat
ttgtattatgatgaaattgctgttccattcacacgaatgcagaatgaatgtaaacagttt
ctctcatcattagctgatgcacatattgaagttggtaatagaataaacaacaatgtttta
acaatagatcaagctaatgacctggtaactactgtttttaatgaagtcacatcaactttt
gatttaaatcctcaagtgttacagcagttagagagtaaacgacatcaggtccaaatgaca
gttgcagagaccaaccaagagtggcaagtgttgcagttgagagtgcatacttttgctgca
tgtgcagttgtgagcttgcagcagcttccagagaaattaaatcctatcataaaaccacta
atggaaacaattaaaaaagaagagaatacgctagtccagaactatgccgctcagtgcata
gctaagcttcttcagcagtgtacaacaagatcaccatgtccaaattcaaaagttattaaa
aacctctgtagctctctgtgtgtggatccatacctcactccctgtgtaacatgtccagtg
ccaacacaaagtggccaggaaaattctaaaggatccaactcagaaaaagatggaatgcac
catactgtcactaagcacagaggtatcattacactgtataggcatcagaaagcagctttt
gctattacaagcaggcgaggtcctatccccaaagcaatcaaagctcagatagcagatctg
cctgcaggaagtagtgggaatgtcctggttgaacttgatgagggtcagaagccttacctg
gtacagcggagaggagctgaatttgccctaacaactatagtaaaacattttggtgctgaa
atggtggtgaagttgccacatctttgggatgctatggttggcccattgaagactatgatt
gacctaaataattttgatggaaagtccctcctggaaagaggtgatggtcctgctcaagaa
ttggtgaattctctgcaagtttttgaaatagcagcagcttcaatggattctgcacttcat
cccttgctggtacagcatttgccacatctgtacatgtgccttcagtatcccagcaccgca
gtgaggcacatggcagctcgctgcataggggtcatgagcaaaatagctaccatggaaacg
atgaacatttttttagagaaggtgcttccgtggctgggagcgattgatgacaatgtcaaa
caagaaggtgcaattgaagcacttgcctgtgttatggaacagttggatgttggtattgtt
ccatatattgtccttctagttgttcctgtattgggaagaatgagtgatcagacagacagt
gtgagattcatggctactcaatgctttgcaacactaattagactgatgccacttgaggca
ggcattccagaccctccaaacatgtcagaagaattaattcagatgaaggcaaaagagcga
cactttttagagcaattattagatgggaagaagttagaaaattacaaaatcccagtacca
atcaatgctgaactaagaaagtatcaacaggatggtgtcaactggttagcgtttcttaat
aaatataagcttcatggaattctgtgtgatgacatgggcttaggaaaaacattacagtcc
atctgcattctagcaggagatcattgtcagagggcccaggaatatgcaagatcgaaattg
gcagaatgcatgccccttccttccttggtggtttgtccaccaacgttaacaggccattgg
gtagatgaagtaggtaaattttgctccaaagaatatctcaatccactgcattatactggc
cctcccactgaaaggataaggttacagcatcaagtaaaaaggcataatctgatagtagct
tcatatgatgttgtgaggaatgacatagacttttttagaaatattaaatttaactactgt
attcttgatgaaggccatgtcataaaaaatggaaaaaccaaattgtccaaagcagtaaaa
caactgactgctaactataggatcattctttccggaacaccaatccagaacaacgttttg
gagttgtggtcattatttgatttccttatgcctggatttttgggtactgaacgccagttt
gctgctcgatatggtaaacctatactagcaagtagggatgcacggagctccagtcgagaa
caagaagccggtgttctcgcaatggatgcactgcaccgccaagtcctgccgttcctcttg
agaagaatgaaagaagatgtcttgcaggatcttccacctaaaattattcaagactattac
tgtactcttagccctctccaggttcagctttatgaagattttgcaaagtctcgtgccaag
tgtgatgttgatgagaccgtgtcttcagctgccctttcagaagaaactgaaaaaccaaag
cttaaagctacaggtcatgtattccaggcattacaatatttacgtaaactgtgcaaccat
ccagcattggtcttaacccctcagcatccagaattcaagagtactactgaaaaactggca
gttcagaattcttcccttcatgatattcaacatgcccctaaactctcagctttgaaacag
ttgctgttggactgtggtttgggaaatggcagcacttcggacagtggcacagagtctgtg
gtggcccagcacagaatactgatcttctgccagcttaaaagcatgcttgatatagtggaa
catgacctgctaaagcctcacctgccctctgtcacctacctgaggctagatggcagcata
cctcctggacagaggcattccatcgtttccaggtttaacaatgacccatccattgatgtt
cttttacttacaactcatgttggtggcctagggcttaacctgactggtgctgacactgtg
gtgtttgtggagcatgactggaaccctatgcgagatctacaggccatggaccgggcccat
cgtatcgggcagaaacgtgtggttaatgtctaccggctgataaccagagggacactggaa
gagaagataatgggcttgcagaaattcaagatgaacatcgcaaataccgttatcagccaa
gagaattctagtctacagagcatggggactgaccagcttcttgacttgtttactctggat
aaggatggcaaggcggaaaaggccgacagctccacttctggaaaagcgagcatgaaatca
gttcttgacaacctgagtgacctctgggatgccgagcagtatgattctgagtacaacctg
gagaccttcatgcgttctctcgagtaa
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integrated database retrieval system
