Peromyscus leucopus (white-footed mouse): 114705428
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Entry
114705428 CDS
T07241
Symbol
Upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114705428 (Upf3b)
03015 mRNA surveillance pathway
114705428 (Upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114705428 (Upf3b)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114705428 (Upf3b)
mRNA cycle factors
P-body specific factors
114705428 (Upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
114705428
NCBI-ProteinID:
XP_028743156
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All DBs
Position
X:complement(104159295..104182855)
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AA seq
486 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPQGATGSSLGATAEGAKGEDKQDRNREKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPDHDYFEFFSNDTSLYPHMYARAYINFKNQEDILLFRDRFDGYVFL
DNKGQEYHAIVEFAPFQKAAKKKIKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPET
LLEEIEAKNRELIAKRTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIERVPEREKIKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKRDK
AKKMDKENVNEERASGQSCTLPKRSDVVELRDEKPKRPEEESFRDYRDRERDYERDQERM
IRERERLKRQEEERRRQQQKERYEKEKAFKRKEEELKREKEALRDKGKKSENTESICTSE
KTERKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPSDDNIKPGDSPVDKKQESGISHR
KEGGEE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaagatcacaggcctaaggagaagcgagtgaccctgttaacgcctcag
ggtgccacaggcagtagccttggagctactgccgaaggcgccaaaggagaagataagcaa
gatcgcaacagggagaagaaagaagctttgagcaaggtggtaattcgaagattacctccc
actttgaccaaggagcagcttcaggagcatcttcagcctatgcctgatcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatatatcaac
tttaaaaaccaagaagacattcttttattcagggaccgatttgatggctatgtatttctt
gacaataaaggtcaggaatatcatgctatcgtagaatttgcaccttttcaaaaagctgca
aaaaagaagattaagaaaagagatacaaaagttgggactattgatgatgatccagaatac
aggaaatttttggagagttatgccacagacaatgaaaaaatgacatctactccagagaca
ttgctggaggaaatagaagccaagaatcgagaattaatagctaaaaggacaaccccactt
ttgagcttcctgaagaacaagcagagaatgagagaagaaaagagggaagaaagaaggaga
cgagaaatagaaaggaaaagacaaagagaagaagagagaagaaaatggaaagaagaggag
aaacgaaaaagaaaagatatagaaaagctaaagaagatagagagagttccagaaagggaa
aaaataaaggacgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaaaccagaaaagggagatgaaaaagaacttgataaaagagacaaa
gccaagaaaatggacaaagagaatgtgaatgaagaaagagccagtgggcaaagttgtact
ctgcccaagcgttctgatgtcgtggagctgagggatgaaaagccgaagaggcctgaggag
gagagtttcagagactacagagacagggagcgggattatgaaagagatcaggagcgcatg
atccgagaaagagagcggctgaagcggcaggaggaagaacggcggaggcagcagcagaag
gagcgctatgagaaagagaaggctttcaaacgaaaggaagaggagctgaagcgagagaaa
gaagcacttcgagataaaggaaagaagagtgagaatacagaatcaatatgcacctcagaa
aaaactgaaaggaaagaggaagtggttaagagagaccgcataaggaacaaggatcgtcca
gcaatgcagctttaccaaccaggagctcgaagccgaaatcgactctgtccctctgatgac
aacatcaagcctggagattcacctgtggacaaaaagcaggaaagtggtattagccataga
aaagaaggaggagaggagtga
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