Peromyscus leucopus (white-footed mouse): 114708090
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Entry
114708090 CDS
T07241
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114708090 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114708090 (Sf3b3)
03041 Spliceosome [BR:
pleu03041
]
114708090 (Sf3b3)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114708090 (Sf3b3)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114708090 (Sf3b3)
Spliceosome [BR:
pleu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114708090 (Sf3b3)
Complex B
114708090 (Sf3b3)
Complex C
U2 SnRNP specific factors
114708090 (Sf3b3)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
114708090 (Sf3b3)
TFTC complex
114708090 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
114708090
NCBI-ProteinID:
XP_028746931
LinkDB
All DBs
Position
5:complement(112793995..112834176)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtataacttgaccctacagcgggccactggcatcagctttgccatccatggc
aacttctccggaaccaaacaacaggaaattgttgtttctcgtgggaagatcttggaatta
cttcgcccagaccctaacactggcaaagtacataccctcctcactgtggaagtatttggt
gttatccggtcacttatggcctttaggctaacaggtggaaccaaagactacattgtagtt
ggtagtgactcgggccgaattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacttttggcaaaagtggatgtcgccgtattgttcctggccagttc
ttagctgtggatcccaaaggaagagctgttatgatcagtgcaattgagaagcaaaaattg
gtatatatcttgaacagagatgctgcagcccgacttaccatttcatctcccctggaggcc
cacaaagcgaacactctagtatatcatgtggttggagtagatgtgggatttgaaaatcct
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcagctaacacccagcagacgctcactttctatgaattagaccttggtttaaatcacgtg
gttcgaaaatacagtgaacccctggaggaacatggcaacttccttattacagttcctgga
gggtcagatggtccaagtggagtgctgatctgttctgaaaattatatcacctataagaac
tttggtgaccaaccagatatccgatgtccaattcctaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtttgttctgccacccataagaccaaatccatgttcttc
tttttggcccaaacggagcagggagatatctttaagatcactttggagacagatgaagat
atggtaactgagatccgcctgaagtattttgatactgtacctgttgctgcggctatgtgt
gtgcttaaaacaggcttcctttttgtggcatcggaatttggaaatcattacttatatcaa
attgcccatcttggagatgacgacgaagaacctgaattttcatctgccatgccactagaa
gaaggagatacattcttctttcagccaagaccactgaaaaacctggtgctggttgatgaa
ctggacagcctctctcccattcttttttgccagatagctgatctggccaatgaagacact
ccacagctgtatgtagcctgtggtaggggtccccggtcatctctgagagtcttaaggcat
ggacttgaggtatcggaaatggctgtttctgagctccctggtaaccccaatgctgtctgg
acagtacgtcggcatattgaagatgaatttgatgcctacatcattgtgtctttcgtgaat
gccacgcttgtgctgtctatcggagagactgtggaagaagtgactgactctgggttcttg
ggcaccactccaaccttgtcctgctccttattaggagatgatgcactggttcaggtgtat
ccagatggcattcgacacatacgagcagataagagagtcaatgagtggaagactcctggc
aagaaaacaattgtgaagtgcgcagtgaaccagcgacaagtggtgatcgccctgactgga
ggagaacttgtctatttcgagatggatccttcaggacagttgaatgagtacacagagcgg
aaagagatgtcagcagacgtggtgtgcatgagtctggccaacgtgcccccaggagaacag
cgatctcgattcctggctgtggggctggtggacaacactgtcagaatcatctcccttgac
ccatcagactgtttacagcctctgagtatgcaggctctcccagcccagcctgagtctctg
tgtattgtggaaatgggtgggactgagaaacaagatgagctgggtgagaggggctctatt
ggcttcctgtacttgaacattggactacagaatggtgtgctactgagaactgtcctagac
cctgtcactggtgacctgtctgacactcgaactagatatctggggtcccgtcctgtgaaa
ctcttccgagtccggatgcaaggccaggaggctgttttggccatgtccagtcgctcgtgg
ttgagctactcttaccagtcccgtttccatctcacccctctgtcttatgaaaccctggag
tttgcgtcaggcttcgcctctgagcagtgtcctgaaggcattgttgccatctccaccaac
accttgaggattctggcattggagaagctgggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcatccaccctgagagtaacaacctcatcatcatc
gagacagaccacaatgcctacactgaggctacaaaggctcagagaaagcagcagatggca
gaggaaatggtagaggcagcaggagaggatgagcgggaactggctgccgaaatggcagca
gcattcctcaatgaaaacctccctgaatctatttttggagctcccaaggctggcaacggg
cagtgggcctctgtgattagggtgatgaaccctatccaggggaatacactagaccttgtc
cagctggaacagaatgaggcagccttcagtgtggcagtgtgtaggttctccaacactggt
gaagactggtatgtgctggtgggtgtggccaaggatttaatattgagccctcgctctgtg
gcaggaggctttgtatatacctacaaacttgtgaacaatggggaaaagttggagttttta
cacaagactccagtggaagaggtccctgctgctattgccccattccaggggagggtattg
attggtgtggggaagcttttacgagtctatgatctggggaaaaagaagttacttcgaaag
tgtgagaataagcatattgccaattacatatctgggatccagactattgggcacagagta
attgtgtctgatgtccaagaaagtttcatctgggttcgttacaagcgtaatgagaaccag
ctcattatctttgctgatgacacctaccccagatgggtcactactgccagccttctcgac
tatgatactgtggctggagcagacaagtttggcaacatttgtgtggtgaggcttccacct
aataccaacgatgaggtcgatgaagatcccactggaaacaaagccctgtgggaccgcggc
ttgctcaatggggcctcacagaaggcagaggtcatcatgaactaccatgtgggtgagacg
gtgctgtcattgcagaagaccacactgatccctggaggctcagaatcacttgtctatacc
actttatctggaggaattggcatcctggtccctttcacatctcatgaggaccatgacttc
ttccagcatgttgagatgcacctgcgatctgagcatccccctctttgtggacgggaccac
ctcagctttcgttcttattatttccctgttaagaatgtgattgatggagacctttgtgag
cagttcaactccatggagcccaacaagcagaagaatgtgtctgaagagctggaccgaacc
ccacctgaagtgtccaagaagcttgaggatattcggacacgttatgctttctga
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