Pantoea ananatis LMG 5342: PANA5342_0081
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Entry
PANA5342_0081 CDS
T01728
Symbol
ygiY
Name
(GenBank) sensor protein
KO
K07645
two-component system, OmpR family, sensor histidine kinase QseC [EC:
2.7.13.3
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf02020
Two-component system
plf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PANA5342_0081 (ygiY)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PANA5342_0081 (ygiY)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plf01001
]
PANA5342_0081 (ygiY)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plf02022
]
PANA5342_0081 (ygiY)
Enzymes [BR:
plf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PANA5342_0081 (ygiY)
Protein kinases [BR:
plf01001
]
Histidine kinases
OmpR family
PANA5342_0081 (ygiY)
Two-component system [BR:
plf02022
]
OmpR family
QseC-QseB (quorum sensing)
PANA5342_0081 (ygiY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
2CSK_N
DoxA
Motif
Other DBs
NCBI-ProteinID:
CCF07474
LinkDB
All DBs
Position
complement(86305..87645)
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AA seq
446 aa
AA seq
DB search
MRSMSLFLRLGIGLVLILGICWGTATLSAWYKTRDTVNELFDTQQMLLAKRLLTLDFTTL
NGTSLPKTKKLLDHNRGEQDDDALAFAVFDREGKQVLNDGDNGKDLPFNADHQGFQDGQL
NGDDDLWRFVWLTTPDQRYRVVVGQEWEYRDDMAKDLVDASMLPWLISLPFMLLMLTGLV
WYELRPLKKLSHQLAGRAPDDDAPLQADRVPKEVRPLIDALNGLFSRIHTMMQRERRFTS
DAAHELRSPLAALRVQSEVIQLAADDEAMRTHALQQLDAGITRATRLVDQLLTLSRIEAE
DVRNTFQPVMLKKVAQDTLASQLPLADKADITLRLNAEADPVISGHALLLSLLIRNLLDN
AIRYTPPGSRVDIVISPNTLRVEDNGNSLSAAELQRLGERFWRPPGQEKSGSGLGLSIVR
NIAQLHGMSLHFSQHPGGGLCVTLHW
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgatgagtttgtttttacgccttggcattggcctggtgctgatactgggcatt
tgttggggaacggccacgctcagcgcctggtataaaacacgtgacaccgttaacgagctg
tttgatacgcaacagatgctgcttgctaagcgcctgctgaccctggacttcacgacgctg
aacggcacgtcgctgcccaaaacgaaaaagctgctggaccataaccgtggcgaacaggac
gatgacgcgctggctttcgcggtatttgaccgggagggaaaacaggtcctcaacgacggc
gataatggcaaagatctgccctttaatgcggatcatcaaggtttccaggatggccagctt
aacggggatgacgatctctggcgctttgtctggctgactacgcccgatcaacgttaccgc
gtcgtggtaggtcaggaatgggaataccgtgacgatatggcaaaagatctggtcgatgcc
agcatgttgccctggctgatctcattaccttttatgctgctgatgttaacgggcctggtg
tggtatgaacttcgtccgctgaagaaactcagccaccagcttgccgggcgggcacctgac
gatgatgcgcccttgcaggccgatcgcgttcccaaagaggtacgaccgttaattgacgcc
ctgaacggcctgttcagccgtattcataccatgatgcagcgggaacgccgttttacgtcg
gatgccgcacacgaattacgcagcccgctcgccgcactgcgagtgcaaagcgaggtcatt
caactggccgccgatgacgaggcgatgcgcactcacgcgctgcaacagctggatgcgggt
attacccgcgccactcgtctggttgatcagctgcttaccctttcccgcattgaagccgag
gatgttcgcaatacgttccagcccgtcatgttaaaaaaggtggcacaggacacgctggct
tcacagctgccactggcagataaggctgacattacgttgcgccttaacgctgaagccgat
ccggttatttcgggacacgcgttgctgctgtcgctgctgatcagaaacctgttggataac
gctatccgctatacaccgccgggcagccgcgttgacatcgtgatcagcccgaatacgttg
cgggtggaggataacggaaacagtctatcggcagccgagttgcagcgtttaggcgaacgt
ttctggcgtccgccggggcaggagaaaagcggcagtgggctgggtttatcgatcgtacgc
aatattgcccagttgcacggtatgtcgctgcacttcagtcaacatcccggcggcggattg
tgcgtcacgctgcactggtga
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