Pantoea ananatis LMG 5342: PANA5342_1361
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Entry
PANA5342_1361 CDS
T01728
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex, subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00071
Fatty acid degradation
plf00280
Valine, leucine and isoleucine degradation
plf00310
Lysine degradation
plf00362
Benzoate degradation
plf00380
Tryptophan metabolism
plf00410
beta-Alanine metabolism
plf00640
Propanoate metabolism
plf00650
Butanoate metabolism
plf00907
Pinene, camphor and geraniol degradation
plf00930
Caprolactam degradation
plf01100
Metabolic pathways
plf01110
Biosynthesis of secondary metabolites
plf01120
Microbial metabolism in diverse environments
plf01200
Carbon metabolism
plf01212
Fatty acid metabolism
Module
plf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PANA5342_1361 (fadJ)
00650 Butanoate metabolism
PANA5342_1361 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
PANA5342_1361 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PANA5342_1361 (fadJ)
00310 Lysine degradation
PANA5342_1361 (fadJ)
00380 Tryptophan metabolism
PANA5342_1361 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PANA5342_1361 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PANA5342_1361 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PANA5342_1361 (fadJ)
00930 Caprolactam degradation
PANA5342_1361 (fadJ)
Enzymes [BR:
plf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PANA5342_1361 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PANA5342_1361 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PANA5342_1361 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
CCF08754
LinkDB
All DBs
Position
1409302..1411422
Genome browser
AA seq
706 aa
AA seq
DB search
MEQSAFTLQMRDDHVGVITIDVPNEKMNTLKAAFAAQIAVIIAEARKHPQLLGLVLISGK
PDNFIAGADISMIDRCQSAHEAEALARQGQDVMAAIAALPFPVVAAIHGACLGGGLELAL
ACNARICSLDDKTRIGLPEVQLGLLPGSGGTQRLPRLIGVQKALPLILTGKNLRARQAKK
LGIVDDAVPQAILLDAAVELVKKGKYRRAPLPLRDRLLQGPMARQALFALVRRETDRKTQ
GNYPAARRIIEVVRIGLEQSSQAGYAAEARAFGELAMTPESAALRSLFFASTAIKKENGT
QAEPRPLQRVGVLGGGLMGGGIASVSAVNAGLPVRIKDISLKGINHALQTSWDLLSKKVK
RRQISPAQRQQQMARISGSTDYQGFTQRDIVIEAVFEDLDLKRQMVADIEANCQPQTIFA
SNTSSIPIAEIAATARRPENIIGLHYFSPVEKMPLVEVIPHATTSPETIASTVMLARKQG
KTPIVVADKPGFYVNRILTPYINEAMRCVVEGEPIDHIDRALVKAGFPVGPVQLLDEVGI
DVGSKISPGLQQAYGERFAAPSALDAVIKDGRKGRKNGRGFYLYGSSRLARKKVDPAVYG
LVKTRPVAKQSGVQIAERCMMMMLNEAVRCLDEQVIRSPRDGDIGAVFGIGFPPFLGGPF
HYIDRLGAAEIVNRLTRLQQQYGDRFAPCNALLRAAEQQKKFYTSS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagcgcgttcacattacagatgcgggacgatcatgtaggcgtgatcaccatt
gatgtacccaatgaaaagatgaatacgcttaaagcggcattcgcggcacagattgcggta
attattgcggaagcacgcaagcatccgcaactgctggggctggtgctgatttcaggcaaa
cctgacaactttattgcaggggctgatatcagcatgatcgatcgctgccagagcgcccac
gaggcagaagcgctggccagacaagggcaggacgtgatggcggcgattgcggcattgcca
tttcctgtggtggcggcaatccatggtgcttgtctgggcggcgggcttgagctggcgctg
gcctgcaacgcgcgcatctgttcgctggacgataaaacccgtattggcctgcctgaagtg
cagttggggctgctgccggggtcgggcggcacgcagcgcctgcctcgcttaatcggcgta
cagaaagccttaccgcttatccttaccggtaagaacctgcgggccaggcaggcgaaaaag
ctgggcattgttgatgatgccgtgccgcaggccatcctgcttgacgccgccgttgaactg
gtgaagaaagggaaataccgcagagcgccgctgcccctgcgcgatcgtctgttgcagggc
ccgatggctcgtcaggcgctgttcgcactggtcagacgcgaaaccgatcgtaaaacccag
ggtaactacccagcggcacgacgcattatcgaggtggttcgcatcggcctggagcagagc
agccaggccggttacgccgcggaagcgcgggcgtttggcgaactggcgatgacgccagag
tcggccgcgctgcgcagcctgttttttgcttccaccgccatcaagaaagagaacggcacc
caggctgaaccacgaccactccaacgggtcggtgtgctgggcggcgggctgatgggcggc
gggatcgccagcgtcagcgccgttaatgcggggctaccggtacgcatcaaggatatcagt
cttaaaggcatcaaccatgccctgcaaaccagttgggatctgctgagtaaaaaagtgaaa
cgccggcaaatcagtccggcacagcgtcagcagcagatggcgcgcatcagcggcagtacc
gactatcagggattcacccagcgcgatatcgtgattgaggcggtctttgaggacctggat
ctgaaaagacagatggtggcggacatcgaggcgaactgtcagcctcagacgatctttgct
tccaatacctcatcgattcccattgccgagattgcggcgacggcacggcgcccggagaac
atcatcggcctgcactattttagcccggtggaaaaaatgccgctggtcgaggtgatcccg
catgccacgacatcgcctgaaacgattgccagtacggtaatgctggcacggaaacagggt
aaaacgccgatagtggtggccgataaacctggtttttacgtcaaccgtatcctcacacct
tacatcaacgaggccatgcgctgcgtggtggagggggaaccgatcgatcacattgatcgg
gcgctggtgaaggcgggattcccggtggggccggttcagctactggatgaagttggcatt
gatgtcggcagtaagatttcaccgggcctgcagcaggcttatggcgagcggtttgccgcg
ccttccgcgctggatgccgtgatcaaagacggtcgcaaaggacgcaaaaacggtagggga
ttctacctgtacggatcgtcgcgtctggcgcgtaaaaaggtcgatccggcggtgtacggc
ttagtgaagacccggccggtggcaaagcaaagcggcgtccagattgccgaacggtgcatg
atgatgatgttaaacgaagcggtgcgttgcctggatgagcaggttatccgctcgccgcgg
gacggcgatatcggtgcggtatttggcattggtttccccccctttttgggcggcccgttc
cattatatcgacaggctgggcgcggcagaaatcgtcaacagattaacgcggcttcagcaa
cagtacggggaccgttttgcgccctgtaacgcgttactgcgcgcagcggagcagcagaaa
aagttttacacttcttcataa
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