Pantoea ananatis LMG 5342: PANA5342_1499
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Entry
PANA5342_1499 CDS
T01728
Symbol
yejH
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plf03400
]
PANA5342_1499 (yejH)
DNA repair and recombination proteins [BR:
plf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PANA5342_1499 (yejH)
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
SLFN-g3_helicase
AAA_22
AAA_16
zinc_ribbon_2
zf-tcix
TniB
MciZ
UPF0547
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CCF08892
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Position
complement(1576845..1578599)
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AA seq
584 aa
AA seq
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MSFTLRPYQQEAVDATLAHFRRHPEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESQRKVVFGSVQSVARNLSLFDRAFSLVIVDECH
RISDDKASQYQQIFNHLRQHNPQLRLLGLTATPFRLGKGWIYRFHYHGMVRGDEQALFRD
CIYELPLRYMIKHQFLVPPERLDMPVVQYDFSRLTAQANGLFSEADLNRELKQQQRVTPH
IIQQIVEFAEDRHGVMIFAATVEHAREILGLLPENSALVSAETHAKDRDALIAAFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKKDCLILDYAGNPH
DLFTPEVGAPKGKSDNQPVQVFCPACGFANTFWGKATSDGMVIEHFGRRCQGVLEDDEGG
REQCDYRFRFKNCPACNAENDIAARRCRECDKILVDPDDMLKAALKLKDARVLRCGGMTL
EQGRDDKGEWLKATYFDEDGTSVSERFRLQTPAQRKAFEHLFMRPHQRAPGVPLGWQTAA
DVLALQPLLRHPDFVVARAKGQFWQIREKLFDYQGRFRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaccttacgcccttatcaacaggaagcggtcgatgccaccctcgcccacttc
cgtcgtcatcctgaacctgccgtgatcgttctgcccaccggggccggaaaaagcctggtg
atcgccgagctggcgcgcctggctcgaggtcgggtgctggtgctggcgcacgttaaagag
ctggtggcgcaaaatcacagcaagtatcaggcttacggacttgaggctgacatctttgcg
gcaggattgcagcgcaaagaaagccagcggaaagtcgtgttcggtagcgtccagtctgtt
gcacgtaatctcagcctgtttgaccgcgccttttcgctggtgattgtagatgagtgccac
cgcattagtgatgacaaagcgagccagtatcagcaaatttttaatcacctgcgccagcat
aatcctcagttgcgtctgctcggcctgaccgcaacaccgtttcgccttggcaaaggctgg
atctaccgttttcattatcacggtatggttcggggcgacgagcaggccctgtttcgcgac
tgcatctatgaactgcccctgcgctatatgatcaagcatcagtttctggtgccgccggaa
cggctggatatgccggtggttcagtatgacttcagccgcctcaccgctcaggcaaatggc
ctgttcagcgaagccgacctgaatcgggaactcaaacagcagcagcgggtgacgccccat
attatccagcagattgtggaatttgccgaggatcgccacggcgtgatgatttttgccgcc
accgtcgaacacgcgcgcgaaattttgggcctgctgcctgaaaacagcgcgctggtgtcg
gcagaaactcacgcgaaagatcgggatgcactaatcgcggcgtttaaagcccagcagctt
aagtttctggtcaacgttgcggtgctaaccaccggcttcgatgcgccgcatgtggatctg
atcgcgatcctgcgccctaccgagtcagtgagcctgtatcaacagattgtcgggcgcggt
ctgcgcctgtcgcccggcaaaaaagactgcctgattctggactatgccggtaatcctcac
gatctgtttacgcctgaagtgggcgcaccgaaagggaaaagtgacaatcagcccgtgcag
gtattttgcccggcctgcggcttcgccaataccttttggggcaaggccacgagcgatggc
atggtgattgagcactttggccgacgttgtcagggcgtactggaagacgacgaaggcggg
cgcgagcagtgtgactaccgctttcggtttaagaactgcccggcgtgcaacgcggaaaac
gacatcgccgcgcgccgctgccgcgaatgcgacaagattctggtcgatcctgacgatatg
cttaaagccgcgctgaagctgaaagatgcgcgcgttctgcgctgcggcggcatgacgctg
gaacagggccgcgacgacaaaggcgaatggttgaaagccacctatttcgatgaagatggc
accagcgtcagtgagcggtttcgtctgcaaacgcccgcacagcgcaaggcgtttgagcac
ctgtttatgcgcccgcatcagcgcgcgcccggcgttccgctgggctggcaaaccgccgcc
gacgtgctggccctgcagcctcttctgcgccatcccgattttgtggtggcccgtgccaaa
ggccagttctggcagattcgcgaaaagctgtttgactaccaggggcgctttcgccgcgct
aacgaactgcgctaa
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