Pantoea ananatis LMG 5342: PANA5342_2692
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Entry
PANA5342_2692 CDS
T01728
Name
(GenBank) RND efflux system inner membrane transporter component
KO
K18138
multidrug efflux pump
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf01501
beta-Lactam resistance
plf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PANA5342_2692
01503 Cationic antimicrobial peptide (CAMP) resistance
PANA5342_2692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plf02000
]
PANA5342_2692
01504 Antimicrobial resistance genes [BR:
plf01504
]
PANA5342_2692
Transporters [BR:
plf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PANA5342_2692
Antimicrobial resistance genes [BR:
plf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PANA5342_2692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
CCF10085
LinkDB
All DBs
Position
2818678..2821839
Genome browser
AA seq
1053 aa
AA seq
DB search
MLAQFFIRRPVFAWVIALCIMLFGILSIRSLPVAQYPDVAPPQISIQATYTGASAETLES
SVTQVIEQQLTGLDGLLYFSSTSTASTGQVKINVTFKQGTDPDIAQVQVQNKVQQAESRL
PSAVTSQGVTVQKAQSDFLLILAVYDKSNKSSASDVADYMVSNMEDTLARVTGVGNVQVF
GAEYAMRIWLDPSKLASYSLMPSDVTTALESQNTQVSSGQLGAQPSSNTQQLVATVRSRS
RLQTPEQFRNIVLKSQADGSVVRLSDVARVEMGDEDYSANVMANGHPASGMAIQLASGAN
ALSTAEKVKSTIDEFRSSMPAGYEIAYPLDSTDFVKISIEEVVKTLVEAVILVVIVMFVF
LQNIRTTLIPTIAVPVVLLGTFGVLSFFGYSINTLTMFGMVLAIGLLVDDAIVVVENVER
VMREEGLPPREATEKSMREITGALVGIALVLSAVFLPMTFFSGSTGVIYRQFSITIVSSM
VLSVIVALTLTPALCATLLKPHNHDSGRNGFFGWFNQRYENVQARYQRGVGKVMHRSVRY
LLLYGVLLIGCAVLYMRLPTGFLPTEDQGYIMVQYQLAPGATENRTREVRRQVQQYFATQ
EKDNVNVSMLVDGFSFAGNGQNAGVGFISLKNWRDRKGSENSADAIAGRAMAALSRIRDA
QIFVLSPPAVSGLGQSNGFTFELQARGATARDQLLKMRDQLIAKANQDTDLSAVRANSLP
DLPQLDVSIDDAKAQSLGLTISDINNTLSAAIGGSYVNDFSDRGRVKKVYMQGDQSFRSK
PEDIDQWYVRGTDSSNNTTMVPFSSFASSKWSYGPDVLSRYNGLASYEIQGSAAEGKSSG
DAITAMEKLAATLPAGTTFAWSGLSYQEKLSGNQALSLYGISLIVVFLCLAALYESWAVP
LSVMLVVPLGVIGSLLAITLRGLENDVYFQVALLTIIGLSSKNAILIVEFAEEHYRKGES
LINAAVHAATMRLRPIIMTSLAFTAGVLPLAISTGAGANSRIAIGTGIIGGTLTATLLAI
FFVPLFFVLVRRVFPAQPHDTARPTDSAAKVKE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgcagttctttatccgtcggccggtctttgcctgggtgatcgccctttgcatc
atgctgttcggtatcctgagtattcgcagcctgcccgtggcgcagtatcccgatgtggca
ccgccacaaatcagtattcaggccacctatacgggcgcatcggcggaaacgctggaaagc
agcgtgacccaggttattgagcaacagctcaccggactggatggactgctctatttcagt
tcgaccagtaccgcatccaccggccaggtgaaaatcaatgtcacgtttaaacagggcacc
gatcccgatattgctcaggtccaggtgcagaataaggtgcagcaggccgagagccgcttg
ccgagcgccgtgacctcacagggcgtgaccgtgcagaaagcccagagcgactttctgctg
attttggcggtgtacgataaaagcaacaaaagcagcgcttccgatgtcgccgactatatg
gtcagcaacatggaagacacgctggcgcgcgtgacaggcgtcggtaacgtacaggttttt
ggcgccgagtacgcgatgcgtatctggctcgatcccagcaagctggcgtcgtattcgctg
atgccttctgatgtcaccaccgctctcgagagtcaaaatacccaggtgtcttccgggcag
ctgggcgcgcaaccgtccagcaacacacaacaactggtggcgacggtacgttcgcgttca
cgcctgcaaacccctgagcagttccgcaacattgtgctgaaaagccaggccgatggttct
gtggtccgtctgagcgatgtcgcacgcgtagaaatgggcgatgaagactacagtgccaat
gtcatggcgaacggccatccggcatccggtatggctatccaactggcatctggcgctaat
gcactctccaccgccgaaaaggtgaaatccaccattgacgaattccggagcagcatgccg
gcgggctatgaaatagcctatccgctcgacagcactgacttcgttaaaatctcgattgaa
gaagtggtgaaaacgctggtcgaagcggtcattttagtggtgattgtgatgtttgtgttc
ctgcaaaacatccgcaccacgctgattcccacgattgcagttccggtcgttctcctgggc
acctttggtgtgctgtctttctttggttattcgattaacacgcttaccatgttcggcatg
gtgctcgccattggtttgctcgtcgatgatgccatcgtcgtggttgaaaacgtcgaacgc
gtgatgcgcgaagagggattacccccgcgagaagcaaccgagaaatcgatgagggagatt
actggtgcgttggttggcatcgcgctggtgctctctgccgtgttcctgccgatgaccttc
tttagcggttcaacaggcgtgatttaccgtcagttctctatcaccatcgtctcttccatg
gtgctgtcggtgattgtggcgctgacgctgacgcccgccctctgtgccaccttgcttaaa
ccgcacaatcacgacagcggtcgcaacggtttctttggctggtttaaccagcgctatgaa
aacgtgcaggcacgctatcaacgtggcgtcgggaaggtcatgcaccgttccgtgcgctat
ctgctgctgtacggcgtgctgttgatcggctgtgccgtgctctatatgcgcctgccaacc
ggctttctgccgaccgaagatcagggttacatcatggtgcagtatcagttggcaccgggt
gcgacggaaaatcgcacccgtgaagtccgtcgtcaggtacagcagtatttcgccacccag
gagaaagataacgttaacgttagcatgctggtagacggcttcagttttgccggtaacgga
cagaatgcgggggtcggctttatctcgcttaagaactggcgtgaccgtaaaggcagtgag
aacagtgctgatgcgattgcaggccgcgccatggcggcgctgtcgcggattcgtgatgcc
cagatctttgtgctgtcgccgcccgccgtctccgggctgggtcaatccaacggcttcacg
tttgagctgcaagcgcgtggtgctaccgcacgcgatcaactgctgaaaatgcgcgatcag
ctgattgcaaaagcgaatcaggatacggatctcagcgctgtacgtgccaactcgctgccg
gacctgccgcaactggatgtcagtatcgatgatgcgaaagcacagtcactgggcctgacc
atcagcgacatcaataatacgctcagcgcagccattggcggcagttatgtcaatgacttc
tccgaccgcggccgcgtgaagaaagtctatatgcagggcgatcaatcgttccgcagcaag
ccagaggatattgatcaatggtatgtccgcggaacagacagcagcaataacaccaccatg
gtgcccttctcgtcctttgcctcgtcgaaatggtcctatggtccggatgtgctttcacgt
tacaacggcctggcatcctatgaaattcagggatcggccgccgaagggaaaagctccggg
gatgccatcaccgcaatggaaaaacttgctgcgaccttgcctgcgggcaccaccttcgcc
tggagtgggctctcttatcaggaaaaactttccggtaatcaggcgctgtcgctgtatggc
atttcactgattgtggtgttcctgtgcctggccgccctgtatgagagctgggcagtgccg
ctttcggtgatgttggtggtgccgttgggcgtcatcggctcactactggcgattacgctg
cgtggcctggaaaatgacgtttactttcaggttgcgctgctcacgatcattggactttcc
tcgaagaatgccattctgattgtggagttcgctgaagagcactaccgcaagggcgagagc
ctgataaacgcggcggttcatgcggcgacgatgcgcttacgtcccatcatcatgacctca
ctggcctttaccgcaggcgtactgccgctggcgatatccacgggcgcgggggccaacagc
cgtatcgccatcggtaccggtattattggcggcaccttaactgccaccctgctggctatt
ttctttgtaccgctgttttttgtgctggtccgccgggtctttccggcacagccgcatgac
acggcccggccaaccgactcagcagcgaaggtgaaggaataa
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