Paucimonas lemoignei: NCTC10937_01673
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Entry
NCTC10937_01673 CDS
T05492
Name
(GenBank) LysM domain-containing protein
Organism
plg
Paucimonas lemoignei
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
LysM
TPR_4
SlyX
ATG16
Motif
Other DBs
NCBI-ProteinID:
SQF97560
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Position
1:1864976..1867153
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AA seq
725 aa
AA seq
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MRNSSRAATPAGFARTAIRRGLMIAAFSSASMFYSTFAQALGMGEITLHSALNQPLNAEI
ELVETAGLAAEDIVAKLASPEAFARAGVDRQFFFNDLRFTPVIKGNRGVIRVVSSKPVTE
PYLQFLVQLNRPNGDLQHEYTLLLDPATSPAGRAALSGRSRDSASQAAPQSRMPVAPPTA
SQGKRYVVASGDTLNAIARRVQGSGANGSVSKLADGIKALNPQAFANGDGSTLQIGQSLA
LPDAAVLPAASANPATSAPATAATPAVAASRNADQVTASAIENQALNQTVADLRLQLQSL
QEQMEGRDKQISTLQTALAEQQSGPAPLPVTPQPAAITAVAAAPVAATPVAPQPAAVEPE
GDSILTSPLLMGAVAILLLLIGLAFSVRRNRQKEQHPGPVSADPTLIKPAQTPVAPVYEV
PAAAVVSKPVSTPVASRPASRPAGGAPDALDGVSIYIAYGRYAEAMGILREALIKQPERA
DIRLKMLELLGEQNDSAGFAQQEHDALESGIPAQQIQDIRARYPKLSSASEAVADAPVAA
ALIPPVTVALASSVAEAEAAELDETAAAALNPEPADEFQLNLDNLALDADWDLVDPFDTP
APLRAKPAVEPEPEEDPDFASNLIEYPEIHEIPDDRFLSDFADDEVPIVESNSDALDDAF
LDGFMDDSSEFDLLDLDDAPLSKVNQAQVLIDEGDVDGARALLLEVIEESDEEHQQTARD
LLAGL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacagttctcgggcggcgacgccagcagggtttgccaggacggccattcgtcgt
ggtttgatgattgccgcgttttcttcggcatcgatgttctattcgaccttcgctcaggca
ttgggcatgggtgagatcaccctgcattcggcgctcaatcagccgctcaacgccgaaatc
gaactggtggaaaccgcaggtctcgcggctgaggatatcgtcgcgaaactggcgtctccg
gaagcgttcgcgcgagccggtgtggatcggcagttcttcttcaacgatctgcgctttacc
cctgtgatcaagggtaaccgtggcgtgatccgggtggtgtccagcaagccggtgaccgag
ccgtatctgcagtttctcgttcagttgaaccgaccgaacggcgacctgcagcacgaatac
accttgttgctcgacccggccacctcacctgccgggcgtgctgccctcagtggtcgcagc
cgcgattccgcctctcaggctgcaccgcagtcgcgcatgcctgttgctccaccgactgcc
tcccagggcaagcgctatgtcgtggccagtggcgatacgctcaacgctatcgcccggcgt
gtacagggctcgggtgccaatggctcggtgagcaagttggccgatggcatcaaggctctg
aacccacaggccttcgccaatggcgatggctctacgttgcaaatcggccaaagcctggca
ctgccggacgcagcggtcttgcccgctgcatccgcgaaccccgcgacttccgcaccagcc
accgctgcgacgcccgccgtcgcagcgtcgcgcaatgctgatcaggtgacagcgtcggcg
attgaaaatcaggcactgaaccagacggttgcggatctgcgcttgcagctacagagcctg
caggagcagatggaagggcgcgacaagcagatttccaccttgcagaccgcgctcgccgag
caacagtctgggcctgcgccgctgcccgttacgccacagcctgcggcgattacggctgtt
gccgctgcacctgtagccgccacgccggtcgcgccgcagcccgctgctgtcgagcccgaa
ggcgactcgatcctgacgtctccgttgttgatgggcgctgtggcgatcctgttgctgctg
atcggactggcattttcggtacgccgcaatcgtcagaaagagcagcatccgggcccggtt
tctgccgacccgaccctgatcaaacccgctcagacgccggtggctccggtttacgaagtg
cctgcggcggcggttgtcagcaagccggtcagcactccggttgcgtcgcgtcccgcttct
cgtccagccggtggcgctcccgacgcgctggatggcgtgagcatctacatcgcttatggg
cgctatgccgaagccatgggcattctgcgtgaagcgttgatcaaacagcctgagcgtgca
gatatccgcctcaagatgctggaattgctgggcgagcagaacgactccgccggttttgca
cagcaagagcacgatgcgctggagagtggtattccggcccagcagattcaagacattcgc
gcgcgttatcccaagctcagctctgcatccgaggctgtggctgacgctcctgttgctgcg
gcgctgatcccgcctgtgactgtggcgttggcctccagcgtggctgaggctgaagcggcc
gagctggatgaaaccgccgccgctgccttgaacccggagcctgccgacgagtttcagctt
aacctggacaacctcgcgctggatgccgactgggatctggttgatccgtttgacacgccc
gcacccttgcgcgcgaagcctgcggtggagccggaaccggaagaggatccggactttgct
tccaacctgatcgaatatccggaaatccatgaaatacccgacgacaggttcctcagcgat
ttcgccgatgacgaggtgccgattgtcgagtccaacagcgatgccctggacgatgcattc
cttgatggcttcatggacgattcgtccgaattcgatctgctggacctggacgatgcgcca
ttgagcaaggtcaatcaggcccaggtgttgatcgacgagggcgacgtcgacggcgcgcgc
gccttgttgcttgaagtgatcgaagagtccgacgaagagcatcagcaaaccgcacgggat
ctgttggcggggttgtaa
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