Planctomyces sp. SH-PL62: VT85_08955
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Entry
VT85_08955 CDS
T04401
Symbol
uvrA_2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VT85_08955 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_08955 (uvrA_2)
DNA repair and recombination proteins [BR:
plh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VT85_08955 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VT85_08955 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
UvrA_inter
nSTAND1
AAA_29
SMC_N
RsgA_GTPase
SbcC_Walker_B
Viral_helicase1
AAA_33
SLFN-g3_helicase
AAA_25
DnaJ_CXXCXGXG
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
AMV37552
UniProt:
A0A142YEU4
LinkDB
All DBs
Position
2321737..2324352
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AA seq
871 aa
AA seq
DB search
MPPPDARIQLRGARTHNLKGIDLDLPLGRLIVVTGVSGAGKSSLALDTLYAEGQRRYVET
FSAYARQFLEPLEKPDVDRIGGVPPAVALAAGARPSARATIGTLSEAHDPLALLFARRGE
VICRACGDRVLPANPRTVSEAVDALPEGARYEIAFPVEILPETDVPALGRTLLEQGMTRV
RVGDLVVDLAAGPLDAVGPIQIDVIVDRLIRGRDAPRRRLDSIETAFARGQGRCRIVSES
GVRTFVRGWRCSRCGTDHVEPQPNLFRWTSPLGACPGCEGVGSVADLDPERIERKAGREK
TPTRADPKLPRRRRPCPDCRGARLRPEALAVRIDGRNVAEFSALPVARARPVLASWAGPD
EPADAARLRSRIAARLDALDRIGLGHLTLDRPARDVAAGELRRTTMARTLGTGLVGTLYV
LDEPTTGLHPREVGQVIEVLQTLRDEGNTLVVVEHDAEVIRAADLVVDLGPGAGEAGGRV
VYSGPVAGLLTAEGSATGDFLSGRRGIERPAERRTPSRGLLTLRGASGRNLKAIDAAFPL
GVLCVVTGVSGAGKSTLVEQTLYPALRERLAGGGPPGLPFLALEGVGDLAEVVLLDHSPC
GRSGRSNPATFLKVLDEVRRTFAATHEAKLRNYGPAMFSFNVDGGRCSACKGEGFRRIDM
QYLPNVTVRCPDCKGTRYRPEILEVAYRGKSIAEVLDLTGREAFGFFRSRPRIQARLRPL
LEVGLDYLRLGQPAATLSGGEAQRLKLAAFLAGSTAALNRAGKIAHTLFLLDEPTAGLHP
ADMARLLDALSNLVDRGHSVVVVEHSTEVMLAADWIIDLGPGAGDDGGRIVAEGTPEEVA
RSGTATGEALARRLRASPGESGEPDDARRRP
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcccgacgcccgcatccagctccgaggcgcgcgaacccacaacctcaagggg
atcgacctcgacctccccctcggccgcctgatcgtggtgaccggcgtcagcggcgcgggg
aagagttcgctggccctggacaccctctacgccgagggccagaggcgctacgtcgagacc
ttctcggcctacgcccgacagttcctggagcccctggagaagcccgacgtcgaccggatc
ggcggcgtcccccccgccgtcgcgctcgccgccggggccaggccgtccgcccgcgccacg
atcggcacgctctccgaggcccacgaccccctcgcgctcctcttcgcccggcggggggag
gtcatctgccgggcctgcggcgatcgcgtcctcccggccaatccccgcaccgtctccgag
gccgtcgacgccctccccgaaggcgcccgctacgagatcgccttccccgtcgagatcctc
cccgagaccgacgtccccgcgctcggtcggacgctcctcgaacaggggatgacccgcgtc
cgggtcggcgacctcgtggtcgacctcgcggccggcccgctcgacgccgtcggcccgatc
cagatcgacgtgatcgtcgaccgcctgatccggggccgcgacgccccccgccgccggctg
gactcgatcgagaccgccttcgccaggggccagggccgctgccggatcgtctccgaatcc
ggcgtccgcacgttcgtccggggctggcgatgcagccggtgcgggaccgaccacgtcgag
ccccagcccaacctcttccgctggacgagtcccctgggcgcctgcccgggctgcgagggc
gtcggctcggtcgccgacctcgacccggaacggatcgagcgcaaggcgggtcgcgagaag
accccgacgcgggcggaccccaaactcccgcgacgtcggcggccgtgccccgactgccgg
ggcgcgaggctccgccccgaggcgctcgccgtgcggatcgacgggcggaacgtcgccgag
ttctcggccctccccgtcgcccgcgcccggccggtcctggcgtcgtgggccgggcccgac
gagccggccgacgccgcgaggctccgctcccggatcgccgcgaggctggacgcgctcgat
cggatcggcctgggccacctgacgctcgaccgcccggcgcgggacgtggccgccggagag
ctgcgacggacgacgatggcccgcaccctggggacgggcctggtggggacgctctacgtc
ctcgacgagccgacgaccggtctccaccctcgcgaagtcggccaggtgatcgaggtcctc
cagacgctccgcgacgaggggaacaccctggtcgtcgtcgagcacgacgccgaggtgatc
cgcgccgccgacctcgtcgtcgaccttgggccgggggcgggcgaggccggcggccgcgtg
gtctactccggtcccgtcgcgggcctgctcacggccgaaggctccgccaccggagatttc
ctgtccggccggcgtgggatcgagcggcccgccgagcgccgcacgccctcgcgcgggctc
ctgacgctccggggcgcctcgggccggaacctcaaggcgatcgacgccgcgttccccctg
ggcgtcctctgcgtcgtgaccggggtcagcggcgcagggaaatccacgctcgtcgaacag
acgctctatcccgccctgcgcgagcggctcgcgggaggggggccgccgggcttgccgttc
ctcgcgctggagggggtcggcgatctcgccgaagtcgtgctgctggaccactcgccgtgc
ggtcggtcgggccggtccaaccccgcgaccttcctgaaggtcctcgacgaggtccgccgc
acgttcgccgcgacccacgaggccaagctgcggaattacggccccgcgatgttcagcttc
aacgtcgacggcggccgatgctcggcctgcaagggggaggggttccgccggatcgacatg
cagtacctccccaacgtgactgtccgctgcccggactgcaaggggacccgctaccgcccg
gagatcctggaggtcgcctatcgcggcaagtcgatcgccgaggtgctcgacctgaccggc
cgggaggcgttcggattcttccgcagccgtcccaggattcaggcccggctccggccgctc
ctggaggtcggcctggattaccttcggctcggccagcccgccgcgaccctctccggcggc
gaggcccagcgcctcaagctggcggccttcctggccggctccacggccgcgctgaaccgc
gcggggaagatcgcccacaccctcttcctgctcgacgagccgaccgccggcctccacccg
gccgacatggcccgcctgctcgacgccctctccaacctcgtcgaccggggccattccgtc
gtcgtcgtcgagcacagcaccgaggtcatgctcgccgccgactggatcatcgacctcggc
cctggcgcgggggacgacggcggccggatcgtcgcggaggggacgcccgaggaggtggcg
cggtccgggaccgccaccggcgaggccctggcccgaagattgcgagcgtccccgggagag
tccggcgaacccgacgacgcccggcggcgtccttga
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