Planctomyces sp. SH-PL62: VT85_23535
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Entry
VT85_23535 CDS
T04401
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plh03009
]
VT85_23535 (rluB)
Enzymes [BR:
plh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VT85_23535 (rluB)
Ribosome biogenesis [BR:
plh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT85_23535 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMV40423
UniProt:
A0A142YMP9
LinkDB
All DBs
Position
complement(5932400..5934385)
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AA seq
661 aa
AA seq
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MAERRSFQGGGKGRPARKEGGGPKPPGGPQRSLSGSGPRRFNKGAKPFRPGQPQGSQSNY
GDRRPPRPGGPGQGPGSNYGDRKPSRGPAGGAPRQPRRFEAQGGPENEKGDRLQKVLAQS
GLGSRRACEEYILQGRVTVDGKTVKELGARVHPGSSVIAVDGERLKAERHVYFAVNKPKG
YVSTNEDPAGRPRVVDLLSEIPERVYTVGRLDEDSTGLMILTNDGQLANRLAHPRFGVEK
VYRAVVAGSPGPDILARLTEGVWLSEGKVRAKRSRIVGSQGEATILELVLAEGKKREIRR
MLAKFGHKVMILTRIAIGPITLKGISVGEHRQLTRTEVDMLRKVAAGVAISPTRFLPDNA
RPPGKGPRPNQGYGQNRPNQGYGQGRPNQGYGQGRPNQGYGQNRPNQGYGQGRPAAGPRA
AEGRGPGHEIDIEALGPPPSQRRARPEGRPNDDRQNQPVRSPSGVVPPRSHYSEGPQGGP
PSRPSGRGRPGAPGGRPQGYRPEGPSSRPQGYRPEGGPSRPQGGYRAEGGPPRPQGGYRA
EGGPPSRPQGGYRAEGGPPSQRPPRPEGGGRPEGPGPRPPGGPGRVPRPAGPPPSQRRST
EQGPPPGPAPKGRRVIGLDAKIYRETTEAVNEGQAPKRPMPKRRPLRKAMGIKRKRPGGK
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgacgatcattccagggaggcggaaaaggccgaccggcgcgaaaagaaggg
ggcggacccaaaccgcccggcggcccccagcggagcctttccgggtcaggacctcggcga
ttcaacaagggggccaagccgtttcgccccggccagcctcagggatcgcagtccaactac
ggcgatcgtcggccccctcggcccggcggaccggggcaggggccggggtcgaattacggc
gaccgcaagccctctcgcggccccgccggcggtgccccgcgccagccccgacggttcgag
gcccagggcggccccgagaatgagaagggcgaccgcctccagaaagtcctggcccagtcc
gggttggggtcgcgccgcgcctgcgaggaatacatcctccagggccgtgtcacggtcgac
ggcaagaccgtcaaggagcttggcgcgcgggtgcaccccggctcctccgtgatcgccgtc
gacggcgagaggctcaaggccgagcgccacgtctacttcgcggtcaacaagcccaagggg
tacgtctccactaacgaagaccccgccgggcgtcctcgggtcgtcgacctgctctccgag
atccccgagcgcgtctacaccgtcggccggctcgacgaggacagcaccgggctgatgatc
ctgaccaacgacggccagctcgccaaccgcctcgcccatcccaggttcggcgtcgagaag
gtctatcgcgccgtcgtcgccggcagccccgggcccgacatcctggcccggctgaccgag
ggagtctggctctccgaaggcaaggtgcgcgccaagcggagccgcatcgtcggctcccag
ggcgaggcgaccatcctggaactggtcctggccgaaggcaagaaacgcgagatccgccgg
atgctcgccaaattcggccacaaggtcatgatcctgacccggatcgcgatcggcccgatc
accctcaaggggatcagcgtcggtgagcaccggcagctcacgcggaccgaagtcgacatg
ctccgcaaggtcgccgccggcgtcgccatctcccccactcgcttcctcccggacaacgcc
cgcccccccggcaagggcccgcggccgaatcagggctacggccagaaccgccccaatcag
ggctatggccagggcaggccgaaccagggctacggccagggtcgcccgaatcagggttac
ggccagaaccgtcccaaccagggctacggccagggtcgcccggccgccggaccgcgagcg
gccgaaggccgaggtccgggacatgagatcgacatcgaggccctggggccgcccccctcc
cagcgccgggcacgccccgagggacggcccaatgacgaccgacagaatcagccggtccgg
tcgcccagcggcgtcgtcccgcctcgctcgcattacagcgaaggtccccagggaggcccg
ccgtcgcgtccctccggtcgaggccgcccgggagcgccgggaggccgtccccagggctat
cgtcccgaagggccgtcgtcgcgtccccagggctaccgccccgaaggaggtccgtcgcga
ccccagggcggctatcgcgccgaaggtggcccgccgcgtccccagggaggctatcgtgcc
gaagggggcccgccgtcgcgcccgcagggcggctatcgtgccgagggaggcccgccgtcg
cagcggcccccccgtcccgaaggtgggggtcgccccgaggggcctggcccgcgtccgccg
ggtggtccggggcgagtgcctcgtccggccgggccgccgccgtcgcagcgacggagcacg
gagcagggaccgccgccgggacccgcaccgaaggggcgtcgggtcatcggcctcgatgcc
aagatttatcgcgagacgaccgaggccgtgaacgaaggccaggcccccaagcggcccatg
ccgaagcgtcggcctttgcgtaaggcgatgggtatcaagaggaagcgaccgggcggcaaa
gcatga
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