Pseudomonas lijiangensis: KQP88_12475
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Entry
KQP88_12475 CDS
T08713
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
plij
Pseudomonas lijiangensis
Pathway
plij01501
beta-Lactam resistance
plij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQP88_12475
01503 Cationic antimicrobial peptide (CAMP) resistance
KQP88_12475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plij02000
]
KQP88_12475
01504 Antimicrobial resistance genes [BR:
plij01504
]
KQP88_12475
Transporters [BR:
plij02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KQP88_12475
Antimicrobial resistance genes [BR:
plij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KQP88_12475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QWU80908
LinkDB
All DBs
Position
complement(2958526..2961645)
Genome browser
AA seq
1039 aa
AA seq
DB search
MAQFFIDRPVFAWVIALFIVLAGLLAIPRLPVAQYPSVAPPQLELTATYPGASANSIDES
VVSLIEQELNGVNNLLYFSSSSSQGTATMTITFQPGTNPELAKVDVQNRLKVIEPRLPRA
VSQQGLQLEEISAGFLMIATLTSTDGRLDEIALSDYLTRNVINELKRLKGVGKAQLFGSE
RAMRIWIDPQKLVAFNLTPADVSQAIAEQNIQVAAGSIGDLPSSTDQELTATVMVKGQLS
TPQEFAAIVLKSNTNGSTVTIGDVARVEVGAQNYNFATRLDGKASVAVGVQLAPAANAMS
TATLVQQKLDELSRYFPAGVKYDIPYDTSPFVKVSITKVIHTLIEAMVLVFIVMFVFLQN
IRYTLIPALVVPVALMGTFAVMYVLGFSINVLTLFGMVLAIGILVDDAIVVVENVERLMA
QEGLSPREATCKAMEEISSAIIGITLVLTAVFIPMAFMSGSVGVIYQQFSISMAVAIVFS
AFLALSLTPALCATMLKPIPANSHHEKKGFFGWFNRRFEQASQGYENLVSKAVGRIGRYM
VIFLLLTGIMGLLFARLPSSFLPMEDQGYTITDIQLPPGASQQRTIEVARQIEAHNTREP
GITNTVMILGFSFSGSGQNAALAFTTLKDWSERAAQDSAQSIADRATAVFSGLKDAMVFS
LLPPPVEGLGTSGGFEVWLQDRSSQGYDAMRQARDEFLRRAGESTVLQNVREASLAETPQ
INIDVDRLQAHAMGVSFSDIASVLSTSLGSAYVNDFPNLGRMQQVIVQSEGDRRQQVEDL
LRLEVKNRQGRMVPVSAFATIKWTKGPAQLTRYNGYSAISLSGEPAQGHSTGDAMEEMER
LASGLPSGFALQWAGLSLQERISGGQVPLLLGLSMLVVFLCLAALYESWAIPAAVLMVVP
LGIIGAVLAVTLRGMPNDVFFKVGLITIIGLSAKNAILIIEFATSLHAQGMGRVEASIRA
ARLRLRPIVMTSLAFIFGVVPLAFASGASSAGQQAIGTGVMGGMLTATLAVLFVPVFFVL
IMGLRERAQRGSAGEEYVG
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagttctttatcgaccggccggtttttgcctgggtcatcgcattgttcatcgtg
ctggccggcctgttggcaatacccaggctgccagtggctcaataccccagcgttgcgccg
cctcaactcgaattgacggccacttaccctggcgcgtccgccaatagcatcgatgagagc
gtggtgagcctgatcgagcaggagctgaacggcgtcaacaatttgctgtatttcagttcc
agcagcagccagggcacggcgaccatgaccattacctttcagccgggcaccaaccccgag
ctggccaaggtcgatgtgcagaaccgtctgaaagtcatcgagccgcgtctgcctcgtgcg
gtcagtcagcagggccttcagctggaagaaatctccgccgggttcctgatgatcgcgacg
ctgacctccacggacggccgtctggacgagattgcgctgagcgactacctgacacgcaac
gtgatcaacgaactcaagcgcctgaaaggcgtgggcaaggcccagttgttcggctcggaa
cgtgccatgcgtatctggatcgatccgcagaaactggtggcgttcaatctgactccggcg
gatgtcagccaggctattgccgagcagaacatacaggttgcggcggggagcattggtgat
ttgccgtcttcgacggatcaggagctgaccgctaccgtcatggtcaaggggcagttgagc
acgcctcaggagtttgccgccattgtgctcaagtcgaacaccaacggttcaaccgtgacc
atcggcgatgtggcccgggttgaagtcggtgcccagaactacaatttcgccacccgcctg
gacgggaaggcatcggtggccgtcggtgtgcaactggcgccggcagccaatgccatgagc
accgcgacactggtgcagcaaaagctcgacgaactctcgcgctactttccggcgggtgtg
aaatacgacattccctatgacacgtcgccttttgtgaaagtctcgatcaccaaggtcatt
cacaccctgatcgaagccatggtgctggtgttcatcgtgatgttcgtgttcctgcagaac
atccgctacaccctgatcccggcccttgtggtgcctgtcgccctgatgggcacctttgcc
gtgatgtatgtgctcggcttctcgatcaacgtgctgacactgttcggcatggtgctggca
atcggcattctggtggacgatgccattgtggtggtggaaaacgtcgaaagactgatggcc
caggaagggctttcacccagagaagcgacctgcaaagccatggaggaaatcagcagcgcc
atcatcggtataaccctggtgctgacagcggtcttcattcccatggcattcatgtcgggt
tcggtgggggtgatttatcagcagttctcgatttccatggccgttgccatcgttttctcg
gcgtttctggccctgagcctgacaccggctctgtgcgccacgatgctcaagccgatacct
gcaaactcgcatcacgaaaagaaaggttttttcggctggttcaaccgccgtttcgagcaa
gccagtcagggttacgaaaatctggtgagcaaggcggtagggcgcattgggcgctacatg
gtcatctttctattgctgacaggcatcatggggctgctgtttgcccgtctgccgtcatcg
ttcctgccaatggaggatcagggttacaccatcaccgatattcaattaccgccaggtgcc
agccagcaacgcaccattgaagtggctaggcagatcgaagcacataacacccgggaaccc
ggtattaccaataccgtgatgattctcggcttcagcttttccggtagcgggcagaatgct
gcgcttgcctttaccacgctgaaagactggtccgagcgagccgctcaggattccgcgcaa
tccattgccgaccgggcaactgccgttttttcaggtctcaaggacgccatggtcttcagt
ctgttgccaccgcccgttgaaggtcttggcacatcgggcggtttcgaggtctggttgcag
gatcgcagttctcaagggtatgacgcgatgcgacaggctcgtgacgagtttttgcgtcga
gccggcgagagcacggttctgcaaaacgtgcgcgaagcctctctggcggaaaccccgcaa
atcaacatcgatgtggatcgcttgcaggcccacgccatgggtgtttcgttctcggatatc
gccagcgtgctgtcgacctcactgggttcagcttacgtcaatgacttcccgaaccttggc
cgcatgcagcaggtgatcgtgcaaagcgagggagaccgtcggcagcaggttgaagacctg
ttgcgcctggaagtcaaaaaccgtcaggggcgcatggtgcctgtttccgcattcgccact
atcaagtggacgaaagggccagcacagctgactcgctacaacggctactcggcgatcagt
ctgtccggcgagcctgcgcaggggcacagcaccggtgatgcaatggaggaaatggagcgt
ctggcttcggggctgccctcagggtttgccctacagtgggcgggactttccttgcaggag
cgcatatccggcggccaggtgccgctgctgctcgggctgtcgatgctggtggtctttctg
tgcctggcggcgctctatgaaagctgggcgattcctgcggcagtcttgatggtggtgccc
ctcgggattatcggcgcggtgctggccgttaccttgcgcggcatgcccaatgacgttttc
ttcaaggtcgggctgatcaccatcatcgggctctcggcgaagaatgccatcctgatcatt
gagttcgcgacgagtcttcatgctcaaggcatgggcagggtcgaggccagtatccgggcg
gctcgtctgcggctgcggcccatcgtgatgacatccctggcgttcatcttcggggttgtg
ccactggcgttcgcctcgggggccagttcggctggtcagcaggccatcgggaccggcgtc
atgggcgggatgctcactgcaacgctggccgtgcttttcgtgccggtgttttttgtcctg
atcatggggttgcgtgagagagcacagcgcggctcggcaggtgaagaatatgtcgggtag
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