Pseudomonas lijiangensis: KQP88_19440
Help
Entry
KQP88_19440 CDS
T08713
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
plij
Pseudomonas lijiangensis
Pathway
plij01501
beta-Lactam resistance
plij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQP88_19440
01503 Cationic antimicrobial peptide (CAMP) resistance
KQP88_19440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plij02000
]
KQP88_19440
01504 Antimicrobial resistance genes [BR:
plij01504
]
KQP88_19440
Transporters [BR:
plij02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KQP88_19440
Antimicrobial resistance genes [BR:
plij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KQP88_19440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QWU82189
LinkDB
All DBs
Position
4643736..4646870
Genome browser
AA seq
1044 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLIGTLSILSLPINQYPSIAPPAIAIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFNQGTNPDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLMVIGLVSEDGSMGKEDLANYIVSNMQDPISRTSGVGDFQVFGA
QYAMRIWLDPAKLNNFQLTPVDVSNAITAQNVQVSSGQLGGLPAIGGQQLNATIIGKTRL
QTAEQFGNILLKVNSDGSQVRVKDVGTVGLGAENYSVDSQYNGKPASGLAIKLAPGANAL
DTAKAIRSTISSLEPFFPPGMKVVYPYDTTPVVSESISGVVHTLGEAIVLVFLVMYLFLQ
NFRATVITTLTVPVVLLGTFGILAAFGFTINTLTMFGMILAIGLLVDDAIVVVENVERVM
AEEKLSPRQATIKSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL
SVVVALIFTPALCATMLKPIDHEKHGQPKRGFFGWFNRNFDRSVVSYERGVGNMLKHKAP
AYLGYILICAGMIWMFTRIPAAFLPEEDQGVIFAQIQTPAGSSSERTQQVIDKMRDYLLT
KESGAVRSVFSVNGFNFAGRGQSSAIAFVMLKPWDERSAENSVFELAKRAQAHFFSFRDA
MVFAVVPPSVLELGNATGFDVYLQDQGGVGHEKLMEARNQFLGMASQSKVLAGVRPNGLN
DEPQYQLLIDDERASALGITLSDINNTLSIALGGRYVNDFIDRGRVKKVYLQGDSGARMT
PEDLNKWYVRNSAGEMVPFSAFASGKWVYGSPKLSRYNGVAAEEVLGTPAPGYSTGEAMA
EVEALAKKLPPGIGISWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPIAVM
LVVPLGVIGALIATSMRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKTLTDA
AIEACRMRLRPIIMTSMAFILGVVPLTISTGAGSGSQHSIGTGVIGGMITAVVLAIFWVP
LFFVSISALFKSKQKPISHDEAGQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattctttatcgatcgcccgattttcgcctgggtaatcgctctggtgatcatg
ctgatcggcaccctgtcgatcctcagcctgccgatcaaccagtacccaagcatcgcgccg
ccagccatcgcgatccaggtaacctacccgggtgcctctgcacagaccgtgcaggacact
gtggtgcaggtcatcgagcaacagctcaacggtatcgacaacctgcgttatgtcagctcg
gaaagtaactccgacggcagcatgaccatcactgcgacgttcaaccagggtaccaacccg
gatacagcgcaggtccaggtccagaacaaactgaacctggccacaccgctgttacctcag
gaagtgcagcagcagggtattcgtgtcaccaaggcagtgaaaaacttcctgatggtgatc
ggtctggtgtccgaagatggcagcatgggcaaggaagacctggccaactacatcgtgtcg
aacatgcaggacccgatctcccggacctccggtgtgggtgacttccaagtgttcggtgcc
cagtacgccatgcgtatctggctcgatccggccaaactgaacaacttccagctcacgccg
gttgatgtcagcaacgcaatcaccgcccagaacgttcaggtgtcttccggtcaactgggc
ggcctgcccgccattggcggccagcaactgaacgccaccatcatcggcaagacccgcctg
cagaccgccgagcagttcggcaatattctgctgaaggtcaacagcgacggttcccaggta
cgggtcaaggatgtcggcaccgtaggtctgggcgcggagaactacagcgtcgactcccag
tacaacggcaaaccggcttccggtctggcgatcaaactggctccaggtgccaacgccctg
gatactgccaaggcaatccgctcgacgatttcctcgcttgagccgttcttcccgccaggc
atgaaagtcgtttacccgtatgacaccactccagtggtcagcgagtcgatttccggggtt
gttcacactctgggcgaagcgattgtcctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccacggtcatcaccacactgaccgtcccggtggtattgctgggtactttc
ggcatcctggcggccttcggcttcaccatcaacaccctgaccatgttcggcatgatcctg
gccatcggcctgttggtggacgacgccattgtcgtggtggaaaacgtcgaacgggtcatg
gcagaagaaaaactgtcgccaaggcaagccaccatcaagtccatggagcagatccagggc
gcattggtgggtattgcactggttctgtcggcggttctgctgccaatggcgttcttcggt
ggctccaccggggtgatctacaaacagttctcgatcaccatcgtttcggcgatggcgctc
tcggtggtggtagccctgatcttcacccctgccctttgcgccacgatgctcaagcctatc
gaccacgagaagcatggccaacccaagcgtggcttcttcggctggttcaaccgcaacttc
gaccgcagcgtcgtgagctacgagcgcggtgtgggcaatatgctcaagcataaagccccc
gcctacctgggctatatcctgatctgcgcaggcatgatctggatgttcacccgcattccg
gccgcgttcctgcctgaagaagaccagggcgtcatcttcgcccagatccagacgcctgcc
ggttcgtcgtcggagcgtacgcagcaagtcatcgacaagatgcgcgactacctgctgacc
aaggaaagcggggccgtcaggtcggtgttctcggtcaacggtttcaacttcgccggtcgc
ggccagagctcggccatcgccttcgtgatgctcaagccatgggatgagcgttcggctgaa
aacagcgtcttcgaactggccaagcgtgcccaggcacacttcttcagcttccgcgatgcg
atggtgttcgccgtagtacctccgtcggttctggagctgggtaacgccaccggtttcgac
gtttacctgcaggatcagggtggcgtaggccatgaaaaactcatggaagcccgcaaccag
ttcctgggcatggcgtcccagagcaaggtgctcgcaggcgtacgccccaacggcctgaac
gatgaaccgcaataccagttgctgatcgacgacgaacgcgccagtgccctcggcattacg
ctgtcggacatcaacaacaccctgtccatcgctctgggtggtcgctacgtcaacgacttc
atcgaccgtggtcgtgtgaagaaggtgtacctgcaaggcgactcgggcgcccgcatgaca
ccggaagacctgaacaaatggtatgtgcgcaacagcgctggcgagatggtgccgttctcg
gcattcgccagcggcaagtgggtctacggttcgcctaaattgtcgcgctacaacggcgtg
gcggcagaggaagtcctcggtacaccggctccgggctacagtaccggcgaggccatggcc
gaagtagaagcactggcgaagaaactgccaccaggcatcggcatctcctggacaggtctg
tcctacgaggaacgtctgtccgggtcgcaggcacctgcgctgtatgctctttccctgctg
gtggtcttcctctgtctggcagccctgtatgaaagctggtcgatcccgatcgcggtcatg
ctagtggttccactgggcgtcatcggtgcgttgatcgcaaccagcatgcgcggcctgtcg
aacgacgtgttcttccaggtaggtttgctggtgaccgtcggtctggcggcgaaaaacgcc
atcctcatcgtggagttcgccaaggaactccacgagcaggggaaaaccctgactgacgct
gcaattgaggcttgccggatgcgcctgcgtccgatcatcatgacctccatggccttcatc
ctgggtgttgtcccactgacaatctccacgggcgcaggctcgggcagccaacactcgatt
ggtacaggcgtcattggcggtatgatcaccgctgtcgtcctggccatcttctgggtgcca
ctgtttttcgtatcgatatcggcgctcttcaagagcaagcagaaacctatctctcacgat
gaggctggccaatga
DBGET
integrated database retrieval system
