Candidatus Planktophila limnetica: PHILAsVB114_06635
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Entry
PHILAsVB114_06635 CDS
T05067
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim00521
Streptomycin biosynthesis
plim00541
O-Antigen nucleotide sugar biosynthesis
plim01100
Metabolic pathways
plim01110
Biosynthesis of secondary metabolites
plim01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PHILAsVB114_06635
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PHILAsVB114_06635
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PHILAsVB114_06635
Enzymes [BR:
plim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PHILAsVB114_06635
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ASY28270
UniProt:
A0A249LGL0
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All DBs
Position
complement(1273375..1273902)
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AA seq
175 aa
AA seq
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MILSSIQDVSFFMHKKKLDDRGYFQRISDQNEIEKICSANFIQSSVSFNSSKGTIRGLHF
QAAPSKEWKYVTCLRGAIFDCVVDLRKNSETYGQHIEFELTEDNGLSVLIPPGVAHGFQT
LENETLISYQMTDVFNESLARTLNWKDFSLDIKWPLDVTQISKSDTEGLPWPVIY
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgtcatcaatacaagacgtaagtttttttatgcataagaaaaaattagatgac
cggggatattttcaaagaatatctgatcaaaatgaaattgaaaaaatctgttctgcaaac
tttattcaatcatctgtatcctttaattcaagtaaaggaactattcgtggacttcatttt
caggcagctccgtcaaaagagtggaaatatgtgacatgcttgaggggtgcaatctttgat
tgcgtcgtcgatttacgcaaaaatagtgaaacttatggacaacacatagaattcgaatta
acggaagataatggcttgagcgtattaattccacctggagtggctcacggatttcaaaca
ctagaaaatgaaactttgataagttatcaaatgacagatgtttttaatgaatccctagct
agaaccttaaactggaaagatttttcacttgacattaaatggccacttgacgttacgcaa
atatccaaatccgataccgaaggtttaccatggccagtcatatattaa
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