Planctopirus limnophila: Plim_0655
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Entry
Plim_0655 CDS
T01225
Name
(GenBank) Pericardin like protein
Organism
plm
Planctopirus limnophila
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pericardin_rpt
Cytadhesin_P30
Motif
Other DBs
NCBI-ProteinID:
ADG66502
UniProt:
D5SR34
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Position
848734..850788
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AA seq
684 aa
AA seq
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MYQKFSWTLAVSLSLASLSPVWAIGGRGGGGGGNRPNISRPSGGGGGGAAAARPSMPSRP
AAPTARPSAPAARPSAPAARPNLPTARPNTPAARPSLPANRPNSLPSGGISRPSGNNRPT
LPTTRPTAPTLPTTRPGAGGGAAQTRPTLPQTRPSLPENRPGVGTGIGNRPEVGGNRPSI
NRPGTSNPGTTLPGGIGNIGGNRPGVTRPSLPEGGINRPGTTRPDITRPEITRPGTGRPE
ISRPDISRPDISRPGISRPEIGGGAGRPGVGGVTRPTPGDLGDFLGMQRPIRPTEPPVRP
LPDRPGIGDRPGIGDRPGIGDRPGIGDRPGIGDRPGIGDRPGIGDRPGIGDRPGIGDRPG
IGDRPGIGERPGIGNGQRPDWSRPEDRPRPGRPGDININNRPSWVNINNNQINVIRNNWG
NAIRPLPGQPGMGNWLNDHPNRRDYWNSWGGSVRSSWRYNGFHRNWYGPNWWVSHPHGWG
GWHFHRWSVWQSPSFWWRVPVWTTFATWFTWRQPPPAVVWSQPVFFDYGTGGNVVINSDS
VLINGQVVATPAEFAESAAVLATVPAPANDEEAAAMEWMPLGTFAISTDRDDKSPSLSIQ
LAVTRTGIIGGTLFNAETDEATSVQGQVDSETQRVAFRIGTTDDLVIETGLYNLTQNEVP
VLAHFGVETTENWLMIRLDPPEDE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagaaattttcatggactttggcggtttcgctatcgctggcatcgctctcgccc
gtctgggcgattggtggtcgaggtggcggtggcggtggcaatcggccaaatatctcgcga
ccttctggcggtggtggggggggagcagcagcagcccggccatccatgccctccagacct
gctgcaccgacggcgaggcccagtgcgccagcggcccggcccagtgcaccagcagcgagg
cctaacctgccgaccgccagaccgaatacgccagcggcccgtccatcacttccggccaat
cggccgaattcgttgccatcgggtgggatctccagaccttcaggaaacaatcgccccacg
ttaccgacaacaaggccgacagcgccgacattgcccacgacgaggcctggggcaggtggt
ggtgcagcccagacacgcccgacgctgcctcaaacccgaccatcacttccggagaaccgt
ccgggcgttgggaccgggattggcaatcgccccgaagttggtggcaacaggccttccatc
aatcgccccgggacatcaaatccgggaaccacacttcccggcggcattggaaacattggt
ggaaatcgtcccggagtaactcgtccttcactgcctgaaggggggatcaatcgccccggt
acgacgcgacctgatatcaccagacctgagatcactcgtcctggaacagggcgtccggag
atctctcgcccagacatttctcgcccagacatttctcgaccgggcatttctcgtccagag
attgggggcggggcaggccgtccgggtgtgggtggggtcacacgcccgacgccgggggat
ctgggtgattttctgggcatgcaacggcctatccgaccaacggaacctcccgtacgccca
ttaccagatcgacccgggattggagatcggccaggtattggagatcgacccggtattgga
gatcgacccggtattggagatcggccaggtattggagatcgacccggtattggcgatcgc
cctggtattggagatcgccctgggattggagatcggcccggtattggagatcgcccaggt
attggagatcgccccgggattggagagcgacccgggattggaaacggtcaacggccagac
tggagtcgacctgaagacaggccacgtccgggacgtccaggtgatattaacatcaacaac
cgcccgagctgggtgaacatcaataacaatcagatcaatgtgatcagaaacaactggggg
aatgcgatcaggcccttgccaggtcagcccggcatggggaactggctcaatgatcaccct
aaccgccgagattattggaatagttggggcggtagtgttcgttcatcgtggagatacaac
ggttttcacagaaactggtatggccccaactggtgggtgagtcatcctcatggctggggt
ggttggcattttcatcgctggagtgtctggcaaagcccgagtttctggtggcgagtgcct
gtctggacgacctttgccacatggttcacctggaggcagcctcctcccgccgtcgtgtgg
tcacagccagtcttctttgattatgggacgggtggaaatgtggtgatcaactcggattcc
gtgttgatcaatggtcaggtggtggcgacaccggctgagtttgcagaaagtgctgcagtt
ctggcgacagtcccggcaccggccaatgacgaagaggcggcagcgatggaatggatgcca
ctggggacatttgccatttcgacagaccgcgatgacaagagcccttcactcagtattcaa
ctggctgtgacacgcacggggatcatcggtggaacgctctttaacgcagagaccgatgaa
gcaacatctgtgcagggtcaggttgattctgagacgcaaagagtggccttccgcattggc
accacggatgatctggtgatcgaaaccggactttacaacctcactcagaatgaagtcccc
gtgttggctcattttggagttgagacgaccgaaaactggctcatgattcggctcgatcca
ccagaagatgagtaa
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