Planctopirus limnophila: Plim_1527
Help
Entry
Plim_1527 CDS
T01225
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
plm
Planctopirus limnophila
Pathway
plm00521
Streptomycin biosynthesis
plm00523
Polyketide sugar unit biosynthesis
plm00541
O-Antigen nucleotide sugar biosynthesis
plm01100
Metabolic pathways
plm01110
Biosynthesis of secondary metabolites
plm01250
Biosynthesis of nucleotide sugars
Module
plm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
plm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Plim_1527
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Plim_1527
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Plim_1527
Enzymes [BR:
plm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Plim_1527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADG67360
UniProt:
D5SW75
LinkDB
All DBs
Position
complement(1970313..1970858)
Genome browser
AA seq
181 aa
AA seq
DB search
MIVTPDDKLPDVLKIEPRVFGDSRGFFFEVFQQERYSSSGLSQAFVQDNVSRSSRGTLRG
LHFQLVRPQAKLIQVIRGEIFDVAVDVRKSSPTFGQWTGYRLSDVNHHQLYIPAGFAHGF
CVISETADVLYKCTDYYFPQHERCLLWNDPAVGIAWPLEDFPILSAKDQQGQTLANLESF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgacaccggatgacaaacttcccgatgtcctgaagattgagccgcgagttttt
ggtgattcccgaggattcttcttcgaagtcttccaacaggaacgctattcaagcagtggc
ttatcacaggcttttgttcaggataatgtgtcccgttcgtcgcgagggacgctgcgggga
ttgcattttcaactcgtacgaccacaggccaaacttatccaggtgattcgtggtgagatt
tttgacgtcgccgtcgatgtccgcaagagttcacccacattcggccaatggacaggctat
cgactgagtgacgtcaaccatcaccaactctatatccctgccggtttcgcccacggcttt
tgcgtgatttctgaaactgccgatgtgctttacaagtgcaccgattattactttccacag
cacgaacgctgtctcctgtggaatgatccggctgtgggcattgcctggccactggaagac
tttcccattctctcggccaaagaccagcaaggccaaaccctcgccaatctggaatccttc
gactga
DBGET
integrated database retrieval system