Planctopirus limnophila: Plim_2361
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Entry
Plim_2361 CDS
T01225
Name
(GenBank) ATP-dependent nuclease subunit B-like protein
Organism
plm
Planctopirus limnophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ADG68187
UniProt:
D5SP43
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All DBs
Position
3068559..3071900
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AA seq
1113 aa
AA seq
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MLEILTGTGAARHQEALARYASHLGQGLADGQLGTGLWLTPSARTHSKTYQALLELLKGK
IAAPNLHTFESFSEIILSHGSAAATPITPSTQFLLLSHAIQTVYQRGDCEEFSAVIETRG
LTKIVSDWIAELKRDETWPEEFLKSCQQQKGGATGKDLALAAIYHEYQALLNARGWYDQE
GRSWLARAAVSQGARAPFDQVRLVVCDGFVDFTWIQYELLEQFARWNADIVITLPDEFAS
QRNTSFDRSELFAIPRRTLEILKSRIKPLQEIRVHSISTNPDHGAVPTGIEQLARNLFGN
PRIVSRCSTAAGFDAIAAGGPHRELEAVSHQIKKWRSSGFLAEEIVVVVRGLASEASRWL
DHFELAGIPAYAPQASSLESCPVVRWMAQLVKLELNDWTSHDLRLVVSSTFFRPAQFPSK
AKRALLAWLAKSPASSRKILSLKARERAADPSALTTEKEINHTLVSQGLETLLRVTEKLS
TSHSFEGWIDLWAAIISQWTPFLPDSSNDRADRADWELLQRILRRVSRCRGTWQEPSERL
SLQAWWSEVEACLSVERSLPPAPSPGMISLIDPAQARFLDSARCVVIVGATEQAYPAADH
TNCLYSHAERQSLIAAGLRLVREEDHSSEETLLFWQLVSMATENLLITYPAINAKGQELF
PSPFVLAACDLFTKDVQLPRHVGSIHVMPEREEIHTRRDLRIVAFEQAMTGHAGWWKTGL
LDTTEGQAYRNMARGLPMLQARYRTEGFTEYEGMLNEPALREEFARQYGPEHQFSVTRLE
LYANCPFRFWIEEVLGLAPRETKQLSTNYLMRGTALHSALASLLGSGRLALADEAELSRI
FAEHVAVEMQRRAKGSPLAEAMARLDSQIVSAWSEQFAASQREYLETMVSAWGGMPETTL
PEVAFGQVYDDHGELIHGPYPALEISRGGHLVRLGGKIDRIDAHKLPTGEQFFSIIDYKS
GGASQYRFDEKAVQQGLSLQLVVYLLAVKRLRMAGDDAEAWQAGFWGLRKEGLVAGLKAG
RKSKEWNRLDEDSVHRLEEAVQQSVIDLAISIRNGEFMVDGATKLKPSPCSSQCPTATVC
RVKQQVGLAKQLHKIRPALDAPRATSPVESPAS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagattttgactggcactggtgccgcacgtcatcaggaggcactggcgcgctat
gccagtcatcttggtcagggtctcgcagacggtcaattggggactggcctgtggctcaca
ccctcggcacgcacgcactcgaagacttatcaggctttgctggaattactgaagggcaag
attgccgcccccaacctgcatacgtttgagtcgttctctgagatcattctgagtcatggg
tctgcggcagcgactcccattacgccatccacgcagtttctgctgctgtcacacgcgatc
cagaccgtctatcagcggggcgactgcgaggagttcagcgctgtcatcgagactcggggt
ttgacaaaaatcgtcagtgactggattgccgagcttaagcgggatgaaacgtggcctgag
gaatttctcaaaagctgccagcagcaaaaagggggcgcgacaggcaaggatctggcactg
gcggcgatttatcacgaataccaggcattgctcaatgcacgcggctggtacgatcaggaa
ggtcgatcgtggttagctcgggcagccgtctcccagggagccagggcacctttcgatcag
gtgcggcttgtggtctgcgatggtttcgtcgacttcacgtggattcagtacgagttactc
gagcaatttgcgagatggaacgccgacattgtcatcaccttgcccgatgaattcgccagc
cagcggaatacgtcttttgatcgaagcgaactgtttgcgattcctcgccgaacacttgag
attctgaagtcgcgaatcaaacccctgcaagagattcgagtccactcgatatcgacaaat
ccagatcatggagctgttcctacgggaatcgaacaacttgcacggaatctttttggtaac
ccgcgaattgtcagccgatgttcaacggctgccgggtttgatgcgattgctgcgggtggg
ccgcatcgcgagctggaggcggtcagtcatcagatcaagaagtggcgttcgagtggtttt
ttggccgaagagatcgtggttgtggttcgaggcctggcgagtgaagcctcgcgctggctg
gatcatttcgaattggcggggataccggcttatgctcctcaggcctcatcgctggaaagc
tgtcccgtcgtgcgctggatggctcaactggtcaaactggaattgaatgactggacgagc
cacgacctgcgtctggtcgtctcatcgacattttttcgccctgcccagtttccctccaaa
gccaagcgggccttattggcgtggctggcgaaatcacccgcttcgagccgcaaaattctt
agcttgaaagcccgcgaacgggcggcagatcccagcgcattgacaactgagaaagagatc
aatcacacgctggtcagtcaggggttggaaacactgctgcgtgtgaccgagaaactcagt
acatcgcacagctttgaagggtggattgatctgtgggcggcgatcatcagtcaatggaca
cccttcttgccggattcatcaaacgatagggcagatcgtgcggattgggaacttctgcaa
aggattctccgccgggtttctcgctgccgggggacatggcaagagccttccgaacgactc
agtctgcaggcgtggtggagcgaagtcgaagcctgcctgagtgtggaacgcagtttgcct
ccggctccatccccaggaatgatttcgctgattgatccggcccaggcacgatttctcgat
tcagcgcggtgcgtcgtgattgtgggtgcgaccgaacaggcttacccggcggcagatcat
accaattgcctttacagtcatgccgagcgtcaaagcctgattgcagcgggtcttcggctg
gtacgggaagaggatcattcttccgaagagacgctgcttttctggcaactggtctccatg
gccacggagaatctgctgatcacctatcccgcgatcaatgccaaaggacaggagcttttt
cccagcccatttgtgctggcggcctgcgacctattcacaaaagacgtgcagttgccccgg
catgtgggatcgatccatgtcatgccggagcgggaagagattcatacccgccgggacttg
cgcattgtggcgtttgagcaggcgatgacaggccatgcgggctggtggaagacgggtttg
ctggacacgaccgagggtcaggcctatcggaatatggctcgcggtctccccatgctgcag
gctcgatatcgaacagaaggctttactgagtacgagggaatgctcaacgaacctgctctt
cgcgaggagtttgcgcgccaatatgggccagagcatcaattcagcgtgacgagattagaa
ctttatgccaattgtccgtttcgattctggatcgaagaggtgctgggactcgcgccacgt
gagacaaagcaactctcgacgaattacctcatgagagggactgctcttcatagtgcctta
gcgtccctattgggaagtggccggctggcattggctgatgaagcggaattgagccggatt
tttgccgaacatgtggctgtcgaaatgcagcgccgggcgaaaggttctccgctggcagaa
gccatggcccggctggattcccagattgtcagtgcgtggagcgaacaatttgctgcgtca
caaagagagtatctggaaacgatggtcagtgcctggggaggcatgcccgaaaccacattg
ccggaagttgcctttggacaggtttacgatgatcacggggagttgattcacgggccgtac
cctgccctggagatttcgcgaggcgggcatctggtacggctgggtggcaagatcgaccgg
attgatgctcacaaacttcctactggtgagcagttcttttcgattatcgattacaaatcg
ggcggggcgagccaataccggttcgacgaaaaggctgtgcagcagggattgagcctgcag
ctggtggtctatctgctggctgtaaaacgattgagaatggcgggagatgatgctgaagca
tggcaggcgggcttctggggattgcgaaaagaaggcctcgtggcaggtttgaaagccggg
aggaagtccaaagaatggaatcgcctcgatgaagattctgtccaccggcttgaagaggct
gtccagcaaagtgtgattgatctggccatcagtattcgcaatggtgaattcatggtcgat
ggagcgaccaaattgaaacccagcccttgcagcagtcaatgtccgaccgcgacagtgtgc
cgggtgaaacagcaggtcggcctcgcgaaacagctccataaaattcggccagcactggat
gcgccgcgggcgaccagccctgtcgaaagtccagcctcctga
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