Planctopirus limnophila: Plim_2887
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Entry
Plim_2887 CDS
T01225
Name
(GenBank) PBS lyase HEAT domain protein repeat-containing protein
Organism
plm
Planctopirus limnophila
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT
HEAT_PBS
HEAT_EZ
Arm
Cnd1
Adaptin_N
ANAPC4_WD40
PDS5
DUF5691
zf-ribbon_3
zinc_ribbon_2
Vitellogenin_N
DZR
Cytochrom_D1
WD40
zinc_ribbon_5
Frtz
NBCH_WD40
CTNNBL
HypA
Motif
Other DBs
NCBI-ProteinID:
ADG68709
UniProt:
D5SRY5
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Position
complement(3740309..3743854)
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AA seq
1181 aa
AA seq
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MSDAAPTCPKCNEPLQPGMLRCRACGERLTPATRQPVAAAAGIGSSVAGVTNAPVATQPL
NSASTARPSSAAGPKTGTVLNLNSLLKTGAVPAGTTGPVGSSGPLGSTSTTATNASPVAT
GGFDQGRTANGLPSGSSGSSLRLKKPAGNTPIQTSPAAATPQATVTKTSTPASTSSTPGS
TDTAKVASAASSKLPLPPTSASSQSGSMRLARPSGSSGRMETFGNDAIRVSCECGAKFRT
KSETAGRKVKCPKCGSAVVVPGGSSETTGPALVEKRKFADLAKEIASLPPLVTTENEPST
GVKNSAEMPAVESGTKIESGSKPGQTSSGSTTKRKKLSKSRLTKLLKAVEPKESASSEDA
EKRRQAVLELGMAENEGLWAELEKLKGDSWIVVREAVATALGDLGQPEATPALIEMLDDE
VPEVRRNAIASVGKLRDARACRAMIVMALQEPHFRFASLDSITKMGNAATASLQQILQEK
DPGYALEAAVVAGRTRDAKLIEPLLKLLGNSFAIVRGQAAESLGQIGDKKATGPLCKLLE
DPEQGVRVAAAGALARLSDPRSVPSLLKGLSQDDADVLERVITALGEIGDAQAAPHLLPL
IDHLQAEIRGAAAEALGKIGASESASPLTRLLHDTDEAVRLKAIAAFRKFKASIAVDPLL
NLLMDPNAQIRLRAVDTLGEIADESAVDNLIHTLHNDGTMEVRQMAAKALGAIGSADGIE
PLEQALEDEFPVRCRAITSLGQIGASASLPALLAMLKDSVPEVRYHTTQALADLGNANAL
KPLEELLSDEHPMVRRGAAKALVKLGDPRGESLLDEKKLASFKKQRPGFKFNFSSLEPTA
FIEAIKAAPPAVAIGAIAVPALLLIGFAAMSLGLLSGGGSSVVVRGRPASLNFTLDGKSV
VIGFNKGVVEVWPATGGSPSSKSVYGNYASNLLATGVEGTFLSVADKQISMLAGGKVTPM
AGLPSIAAYTIQSPDGKHAAAIGSDGSITFLDLENAKPMQAIQLNTKAVTCMGLSNGGRE
IVGGKKDGSITIWEAQSGKPVTELKLGTIVPAAIGFNSAGDKLVVANLRGGVGIYDIKTR
KRLNDLPFEGKTAPIFAGASFVGGNDDLVLLSAGSSLTTWKVSTNEVKASPAYDLVGGIG
GLAISPTGEHMAFMDTESADVVVVSLPSLEEAAVLSVPAGR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgctgcacccacctgcccgaaatgcaacgaacctcttcagcccgggatgctc
cgttgccgtgcctgtggcgaaaggctgacccctgcgacacggcaacccgtcgcagctgcc
gcgggaattggcagttcagtcgccggtgtgacaaacgcacccgtagcgacacaacctttg
aattctgcatcgacagctcgaccatcatcggctgctggtccgaagacagggaccgttctc
aacctaaacagcttgctcaagacaggggcagtccctgccggaacaactggccctgtcggt
tcaagtggccctctcggctcgactagcacaacggcaacaaatgcatctcctgtggccaca
ggaggctttgatcagggacgtaccgcgaatggacttccgtctggttcttcaggatcgagc
ctgcgtctgaagaagccggctggtaatacgcccattcaaacgtcacctgcggctgccacg
ccgcaggcaaccgtcacaaagacttctacgcccgcttcgacttcctcgaccccaggatcg
actgacaccgccaaggtcgcttcggccgcctccagcaagcttccattgcctcccaccagt
gccagttcccagtcgggcagcatgcgattggctcggcccagtggctccagcggtcgcatg
gaaacctttggtaatgacgccattcgagtctcctgcgaatgcggcgccaagttccgtacc
aagagtgaaacggctggcagaaaggtcaaatgccccaagtgtggttcagcagtggtcgta
cccggtggttcgtcggaaacgactgggccggcacttgttgaaaaacgaaagtttgccgat
ctggcgaaagaaattgccagtttgccacctctggtcacgaccgaaaatgagccctcgacc
ggcgtgaaaaactccgcagaaatgcccgctgtcgaatcgggaaccaaaattgaaagtggt
tccaagcccgggcaaacgtcatcgggtagcacgaccaaaaggaagaagttatcaaaatca
cgcctgacgaagttgttaaaagccgttgaacccaaagagagcgccagttcggaagatgcc
gaaaaacgccgacaagccgttttagaattgggcatggccgaaaatgaagggctgtgggcc
gaattggagaaacttaaaggcgatagctggattgtcgttcgtgaggctgtcgctaccgca
ttaggtgatctggggcaaccggaagcgacgcccgccctgattgaaatgctcgacgatgaa
gttcccgaggtcaggcgcaatgcgattgcctctgtgggaaaactgcgcgatgccagagcc
tgtcgagcgatgattgtgatggctttgcaggagcctcacttccgctttgcctcactcgac
tccatcaccaaaatggggaatgcggccactgcgtcgttgcaacagattctgcaggagaaa
gacccgggctatgctctcgaagccgccgttgtagctgggcggacacgcgatgcgaagctg
attgaaccattactgaaactgcttggaaattcgtttgcgattgttcgtggtcaggctgcg
gaaagccttggtcagattggcgataagaaggccacggggccactttgtaaacttctggaa
gatcctgaacagggtgtgcgagtcgcagcagccggtgccttggccaggctgtctgatcca
cgctcagttcccagtttgctcaagggattatcacaggatgatgccgatgttctggaacgc
gtgattaccgccctgggagagatcggtgatgcccaggcggctcctcatctattgccactg
attgatcatcttcaagcggaaatccgcggagctgccgccgaggcactgggcaaaatcggc
gcttctgaatccgcttcgcctttgacacgtctactgcacgataccgatgaagctgtccgt
ctgaaggcgattgctgctttccgtaagtttaaagcaagcatcgcggtcgatcctctgctg
aacttgctgatggatccgaacgctcagatccgcctccgtgctgtcgatacattaggtgag
attgctgacgaatcggccgtcgataacctgatccacactctgcacaatgatggcacgatg
gaagttcggcagatggccgccaaggctttgggggcgattggctctgccgatggaattgaa
cctctcgaacaggcattggaagatgagttccctgttcgttgccgcgcgatcacctcttta
ggtcagattggcgcatcggcttcgttgccggccctactggcgatgctcaaagattctgta
ccggaagtgcgctatcacacgacacaggcgttagccgatcttgggaatgcgaatgctctc
aaacccctcgaagagctcctttccgatgaacaccccatggttcgtcgcggggctgccaag
gctttggtcaagctgggagatcctcggggggaatcgctactcgatgagaagaaactcgcc
agcttcaagaaacaacgcccagggttcaaattcaatttctcatcactggagccgacggcg
ttcatcgaagcgatcaaagcggcaccaccagcagtggcgattggtgccattgcggttccg
gcactgctgctgattggctttgccgctatgagcctgggtctgctgagtggcggaggttcc
agcgtggtggtacgcggccgaccggcttcgctgaacttcactctcgacgggaaatctgtc
gttatcggattcaataaaggtgtggttgaggtctggccagcaacgggtggatcaccttca
tcgaaatcggtctacgggaattatgcctccaatctgctggcgactggcgtggaagggact
ttcttaagtgtggcggacaaacagatttcaatgctcgccggcggcaaagtgacccccatg
gccggtctgccttcgattgccgcctacacgattcagtcacccgacggaaagcatgcggct
gccattggctcagatggttcaatcacgtttcttgatctggaaaatgccaaaccaatgcag
gccattcaactcaatacaaaagctgtgacctgcatgggcctttcgaatggtggtcgtgaa
attgtcggtggaaagaaagacggcagcatcactatctgggaagctcaatctggtaagccc
gtgactgaactcaaactgggcaccattgtcccggctgccatcggattcaattccgcgggt
gacaaactcgtggtcgccaatctccgcggtggagtcggcatttatgatatcaagacccgc
aagcggctgaatgacttgccattcgaaggcaaaacagcaccaatctttgccggtgccagc
tttgtgggaggtaacgatgatctggtgctgctctcagcgggcagttctctcaccacctgg
aaggtatcaaccaatgaagtaaaggcttcccctgcttacgatcttgtgggcggcattgga
ggtcttgccatcagcccgacgggcgaacacatggcctttatggacacggaatcggccgat
gtcgtggttgtaagcctcccctcactcgaagaagcagccgtcctgagtgtcccggctggt
cgttaa
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