Perognathus longimembris pacificus (Pacific pocket mouse): 125339780
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Entry
125339780 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-B2-like
KO
K16496
protocadherin gamma subfamily B
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125339780
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Protocadherins
125339780
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
125339780
NCBI-ProteinID:
XP_048186997
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Position
22:complement(6806124..6810098)
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AA seq
792 aa
AA seq
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MENRARQWSRAPWRQVLFPFLLPLFCAGLSEQIRYSIPEEMPRGSVVGNLAADLGLHARD
LLTRNLRVSAEKQYFTVNTETGDVLVGDRIDRELLCPQTPRCVLPLEIVADNPLNVFHVN
VEISDINDNPPRFPQSSVVLQINEFATPGAHFGLESAVDADVGLHSLQSYQLSANEHFSV
TVKDKAEGKSAPELVLEKPLDREQQSGHLLVLTAADGGDPVLTGTTQIQIQVTDANDNPP
VFSQPVYRVRLRENMPPGTSVLKVTATDQDEGINAEITYAFKSLGEDIGNKFTLDHRNGE
ITSKDSVDFESRSSYTMSIEAKDGGGLATECEIILDILDENDNAPDLVFTSVSSAIAEDA
AVGSVVALFKTHDKDSGENGEVTCLIKEKVPFRIEPSASNYYKLVTDGTLDREETPEYNV
TIMATDRGKPPLSTETSITLQLSDVNDNAPAFQQASYVVHVAENNPPGASIAQVSACDPD
AGRNGQVSYSIVASDLEARALASYVSVSAHSGAVFAQRALDHEQLRSFRLTVQARDQGAP
PAAANASLRVLVGDRNDNAPRVLYPAPEPDGSAPLHTVPRAAEPGSLVTKVVAVDADSGH
NAWLSYHVLQASEPGLFSLGLRSGEVRTARALADRDAARQRLVVAVRDGGQPPLSATATL
HLVFADSLQEVPPDFTDHPLPPDPQAELQFYLVVALALISVLFLLALVLAIALRLRHSRS
PASWGCLQPGLCSKSRPGVSLNYNEGTLPYSYNVCVASDSQNTKFNFLTMTPEMVPAQDL
SKEPSLTVSVTE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgggcgagacaatggagccgagccccgtggcggcaagtactcttccccttc
ctgctgcctttgttctgtgcggggctctcggagcagatccgctattcgattccggaagaa
atgcccaggggctccgtggtggggaacctcgctgcggacctggggctgcacgctcgcgat
ttgctgactcgcaaccttcgagttagcgcggagaaacagtacttcactgtgaacaccgag
accggggacgtactcgtgggcgacagaatagaccgggagctgctctgcccgcaaacccct
cggtgtgtgctgcccttagagattgtagcagacaatcccctgaatgttttccatgtgaat
gtggagataagcgacataaacgacaatccacctcgtttcccccaaagtagcgtcgttctg
caaatcaacgagtttgcgactccaggcgctcactttggcctggaatccgctgtagatgca
gatgtagggcttcactcgctccagagttaccagctcagcgccaatgagcatttctctgtg
acggtgaaggacaaggcggaaggcaagagtgccccagaattagtgttggagaagcccctg
gacagggaacaacagagcggccatctcctggtcctcaccgcagcggatggaggagaccct
gttctgaccggcaccactcagattcaaattcaggtcacggatgccaatgataaccctcct
gttttcagccaacctgtgtacagagtccgcctccgggaaaacatgccaccgggcacctcg
gtgctaaaggtgacagccacggaccaggacgagggcatcaacgcagagatcacctatgcc
tttaaatccctgggagaggacattggaaataaatttacgctagatcatcgaaatggggaa
attacatctaaagactctgtagacttcgaatccaggagcagttataccatgagcatagag
gctaaagacggtggaggcctggccacggaatgtgaaattatactagacattctggatgag
aacgacaatgccccagaccttgttttcacctccgtgtccagtgccatagcagaggacgct
gcagttggaagcgtggttgcactgttcaaaacacatgacaaagactcgggggaaaatggg
gaggtcacgtgtctcataaaagaaaaagtcccttttaggattgaaccatccgctagtaat
tactacaagctcgtaaccgatgggactctggaccgggaagagaccccagagtacaatgtc
accatcatggccaccgacagggggaagccgcccctctccaccgagacatccatcaccctg
cagctatccgacgtgaacgacaacgcgccggctttccagcaggcctcctacgtggtgcac
gtggccgagaacaaccctcccggagcctccatcgcgcaagtcagcgcctgcgacccggac
gcggggcgcaacggccaagtgtcctactcgatcgtggccagcgacctggaggcgcgcgcg
ctggcgtcctacgtgtcggtgagcgcgcacagcggggcggtgttcgcgcagcgcgccctg
gaccacgagcagctgcgctccttccggctcacggtgcaggcgcgcgaccagggcgcgccc
cccgcggcggccaacgccagcctgcgcgtgctggtgggcgaccgcaacgacaacgcgccg
cgcgtgctctaccccgcgccggagcccgacggctcggcgcccctgcacacggtgccgcgc
gccgccgagcccggctccctggtcaccaaggtggtggcggtggacgccgactcgggacac
aacgcctggctgtcctaccacgtgctgcaggccagcgagcccggcctcttcagcctgggg
ctgcgctcgggcgaggtgcgcaccgcccgcgccctggccgacagggacgcggcccgccag
cgcctggtggtggccgtgcgcgacgggggccagccgcccctctcggccaccgccacgctg
cacctggtgtttgccgacagcctgcaggaggtgccgccggacttcaccgaccaccctttg
ccccccgacccccaggccgagctgcagttttacttggtcgtcgccttggccttgatctcc
gtgctcttcctgctcgccttggtcctggccatcgccctgcgcctgcgacactcccgcagt
ccagcttcctggggctgcttgcagcctggtctctgttctaagtctagaccaggggtttcg
ctcaactacaacgaagggactctaccttattcctacaatgtgtgcgtcgcctccgattct
caaaacaccaagtttaattttctcaccatgacgccagaaatggtcccggcacaagatctt
tctaaggaaccttctttgacagtaagtgtcaccgagtaa
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