Perognathus longimembris pacificus (Pacific pocket mouse): 125341565
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Entry
125341565 CDS
T08928
Symbol
Pdlim5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125341565 (Pdlim5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125341565 (Pdlim5)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125341565 (Pdlim5)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125341565
NCBI-ProteinID:
XP_048189569
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Position
24:complement(21522609..21665804)
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AA seq
591 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAQG
MTHLEAQNKIKACTGSLNMTLQRASATSKPEPVTVQKGEPKEVVKPVPITSPAVSKVTST
TNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPPFSASGLH
VNANPSADQPSALSTGQTAVNVPRQPTVTSVCSEPAQELAEGQRRGSQGDSKQQNGPPRK
HIVERNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESETD
NAKKANPAEHPSLAGASPRMAAEGMDSAGVGRPGTASLTTAAAFKPVASTGVIKSPSWQR
PSQAAPSTGRISNNVTSPGARAPASSAAGQPQPTDQDTLVQRAEHIPAGKRTPMCAHCNQ
VIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECGRCQRK
ILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICRGCEFPI
EAGDMFLEALGFTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtccttggttggtccagctccgtgggggttccggcttcaaggt
ggcaaggatttcaacatgcctctgacaatctctagtctgaaagatgggggcaaggcgtcc
caggccaacgtgagaataggcgacgttgtcctcagcattgatgggatcagtgcgcaagga
atgactcatcttgaagcacagaacaagattaaggcttgtacaggctctttgaacatgact
ctgcaaagagcatctgctacatccaagcctgagccagttactgttcagaagggagaacct
aaagaagtagttaagcctgtgcccattacatctcctgctgtgtccaaagtcacttccaca
accaacatggcctacaataaggcacctcggccctttggttctgtgtcttcaccaaaagtc
acgtccattccatcaccatcgtctgccttcaccccagcccatgccaccacctcatcacat
gcttccccttcacctgtggctgctgtcactcctcccccattctctgcatctggactgcat
gttaatgccaaccctagtgctgaccagccttctgcactgagcactggtcaaactgcagtt
aatgtcccacggcagcccacagtcaccagcgtgtgttccgagcctgctcaagagctagca
gagggacagagaagaggatcccagggtgacagtaaacaacaaaatggcccaccaagaaag
cacattgtggagcgcaatacagagttttaccacatacccacccacagcgatgccagcaag
aagagactgatcgaggacacagaggactggcgcccaaggacgggaaccactcagtctcgc
tctttccgaatcctcgcccagatcaccgggactgaacatctgaaagaatctgaaactgac
aatgcaaagaaggcaaaccctgctgagcaccccagtttggcaggagcctcaccccgcatg
gcggctgaaggcatggacagcgcaggcgtgggcagaccgggtacagccagcctcaccaca
gccgctgccttcaaacctgtagcatccaccggtgtcatcaagtcacccagctggcagcgg
ccgagccaagcagcaccttctactggaaggatttcaaacaatgtgacttctccaggagcc
cgggcaccagccagctcagctgcggggcagcctcagcccactgaccaggacacattagtg
caaagggcggagcacattcctgcagggaagcgaactccgatgtgtgcccactgcaaccag
gtcatcaggggacccttcctggtggcactggggaaatcttggcacccagaagaattcaac
tgtgctcactgcaaaaataccatggcctacattggatttgtagaggagaagggagctctg
tattgtgagctgtgctatgagaaattctttgctcctgaatgtggtcgatgccaaaggaag
atccttggagaagtcatcaatgctttgaaacaaacttggcatgtttcctgttttgtatgt
gtggcctgtggaaagcccattcgtaataatgtttttcacctggaggatggtgaaccctac
tgtgagactgattattatgccctttttggtactatatgccgtggatgtgaatttcccata
gaagctggggacatgtttctggaagccctgggctttacctggcatgatacttgctttgta
tgctcagtgtgctgtgagagtttggaaggtcagacgtttttctccaagaaggacaagcct
ctttgcaaaaagcatgctcattctgtgaatttttga
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