Perognathus longimembris pacificus (Pacific pocket mouse): 125341613
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Entry
125341613 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquilin-1-like
KO
K04523
ubiquilin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04141
Protein processing in endoplasmic reticulum
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125341613
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125341613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125341613
03051 Proteasome [BR:
plop03051
]
125341613
Membrane trafficking [BR:
plop04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
125341613
Proteasome [BR:
plop03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125341613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Rad60-SLD_2
YukD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
HOIP-UBA
XPC-binding
Motif
Other DBs
NCBI-GeneID:
125341613
NCBI-ProteinID:
XP_048189626
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All DBs
Position
24:330068..332287
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AA seq
586 aa
AA seq
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MAQSGESGRPQGSPDSPAKGASAPVATAEPKIMKVKVKTPKEKEEFAMPENSSVQQFKEE
ISKRFKSHTEQLVLIFAGNILKDQDTLSQHGIHDGLTVHLVIKTQNRSQDYSAQQTNTTG
NNATNSPPISNPTSGYATSNSFGLGGLGGLACLSSLGLNTTNFSELQSQMQQQLLSNPEM
MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP
AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSSTSS
GEGSQPSRTENRDPLPNPWAPQASQSSSASSGSTNTVSGTTGNATSATTGQSTAGPNLAP
GVGGASMFNTPGMQSLLQQITKNPQLMQNMLSAPYMRIMMQSLRQNPDLASQMMLNNPLF
AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQVKQGLQTLATEAPGLIPGF
NPGLGALGSTGGPSGTNGANTAPSENANPTTGTTEQPGHQQFIQQMLQALAGVNPQLXNP
KVRFQQQLEQVSAMGFLNRETNLQALIATGGDINAAIEWLLGSQLS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagtggagaaagtggcagacctcagggctctccggacagcccggccaagggt
gccagcgcccctgtggccaccgccgaacccaagatcatgaaagtcaaggtgaagaccccg
aaggagaaggaggagttcgccatgcccgagaacagttccgtccagcagtttaaagaagaa
atttctaaacgttttaaatcacatactgaacaacttgtattgatatttgctggaaacatt
ttaaaagatcaggatactttgagccagcatggaattcatgatggacttactgttcacctt
gtcatcaaaactcaaaacaggtctcaagactattcagctcagcagacaaacactaccggg
aacaatgctaccaattcaccccctattagtaaccccacatctggttatgctaccagcaat
tcttttggtttaggtggacttggaggacttgcatgtttgagtagcttgggcttgaatact
accaacttctctgaactacagagccaaatgcaacaacaacttttatccaaccctgaaatg
atggtccagatcatggaaaatcccttcgttcagagcatgctctccaatcctgacctgatg
aggcagttaattatggccaacccacaaatgcagcagttgatacagagaaatccagaaatt
agtcatatgcttaataatccagatataatgagacaaacattggaacttgccaggaatcca
gcaatgatgcaggaaatgatgagaaaccaggaccgagctttgagcaacctggaaagtatc
cccggaggatacaatgctttgcgccgcatgtatacagatattcaggaaccaatgctgagt
gctgcccaagagcagtttggtggcaatccatttgcttccttagtgagcagtacatcctca
ggtgaaggtagtcaaccttctcgtacagaaaatagagatccattacccaatccatgggct
ccacaggcttcccagagttcatcagcttccagtggctccactaacactgtgagtggcact
actggcaatgctaccagtgccactactgggcagagtactgctgggccaaatttggcgcct
ggagtaggaggagctagtatgttcaacacaccaggaatgcagagcttgttgcagcaaata
actaaaaacccacaacttatgcaaaacatgttgtccgccccttacatgaggatcatgatg
cagtccctaagacagaatcctgaccttgcttcacagatgatgctgaataatcccctattt
gctggaaatcctcagcttcaagagcaaatgagacaacaactcccaacttttctccaacaa
atgcagaatcctgatacattatcagcaatgtcaaaccctagagcaatgcaggccttgcta
caggttaagcagggtttacagacattggcaacggaagcccccggcctcatcccagggttt
aatcctggcttgggggcattaggaagcactggaggcccttcaggaaccaatggtgctaac
accgcaccaagtgaaaatgcaaaccctacaacaggaactactgaacaacctggacaccag
cagttcattcaacaaatgctgcaggctctggctggagtaaacccacaactatagaatccc
aaagtcagatttcagcaacaactggagcaggtcagtgctatggggtttttgaaccgtgaa
acaaacttacaagcactaatagcaacaggaggagacatcaatgcagctattgaatggtta
ttgggctctcaactatcatag
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