Perognathus longimembris pacificus (Pacific pocket mouse): 125341648
Help
Entry
125341648 CDS
T08928
Symbol
Spata5
Name
(RefSeq) ATPase family protein 2 homolog isoform X1
KO
K14575
AAA family ATPase
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125341648 (Spata5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125341648 (Spata5)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125341648 (Spata5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_28
Mg_chelatase
Parvo_NS1
AAA_25
nSTAND3
AAA_33
RNA_helicase
AAA_2
IstB_IS21
AAA_7
AAA_14
AAA_18
Rad17
AAA_3
ATPase
TsaE
AAA_17
Zeta_toxin
bpMoxR
Sigma54_activat
AAA_19
AAA_11
AAA_24
NACHT
CDC48_N
DUF5906
Bac_DnaA
T2SSE
AAA_6
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
125341648
NCBI-ProteinID:
XP_048189666
LinkDB
All DBs
Position
24:2187707..2329056
Genome browser
AA seq
898 aa
AA seq
DB search
MSSKRNRKRLNHSAEGRSPSAAAAAARPGGPASAPDPEKAPGTLLATNFLEKEVRVPKAF
QDFVVHLGVNTMKSANICIGRPVLLTSLNGKQEVCTAWPVAGFPGGKVGLSEMTQRNLGV
KAGDSTRVQPLVGALVQAEEVDLALSDEDQSVSGEDLASCILRKLDGKVVLPGNFLYCTF
YLRLCKLQVLQVKGADGMILERPQGSSAEDSQEVVSECPSMDSSSLDLSLQLGQLVLEEP
QSPASSSTPCKPVVDTVVSTASDILLDVAQSSGDGSGLGLEDITGLKCCFESAREGNKQL
INEERLLKSASMGSKCSTDTFYFISSTTRINFTKTCAKLKEQDNQFRVTYDMIGGLGSQL
EAIRKIIEMPLKQPELFKHYGIPAPRGVLLYGPPGTGKTMIARAIANEVGAYVSVINGPE
IISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMD
GIGSEGSEGQVLVLGATNRPEALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLQRLPH
LLTEAELIQLANDAHGYVGADLKALCIEAGFCALRSFLKKQPNLPDSKVASLVKITLNDF
LQGMKDIRPSAMREVAIDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFIRMGIQPPK
GVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPS
IIFFDELDALAVERGSSSGSGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKAL
MRPGRIDTIIYVPLPDGATRKEILTLQFRSMPVSNEVDLDELVLQMDKYSGAEIIAVCRE
AALLALEEDFKVKCIMKRHFTQALRTVTPRISESLRQFYEHYQEKSGLHSGKHAHSFY
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagagaaaccggaagcggctgaaccacagcgccgaggggcgttcgccctcg
gccgccgccgccgcggctcggcccgggggtcccgcttctgccccagaccccgagaaggcg
cccgggacgttgctggccactaactttctagagaaagaagtcagagtccctaaagcgttc
caggattttgttgttcatctgggagtcaacactatgaagtctgcgaatatatgtataggc
cgaccagtgttgcttaccagtttgaatggaaagcaagaggtctgcacagcctggcctgtg
gcaggatttcctggaggcaaggttggcctgagtgaaatgacccagaggaatctaggggtg
aaagctggcgatagcacccgggtgcagcctctcgtgggtgctcttgttcaggctgaggaa
gtggacctggccttgagtgatgaagatcagagtgttagtggagaagacctggctagttgt
attctgaggaaacttgatggcaaggttgttttaccaggcaactttctgtattgtaccttc
tatttacgactatgcaagctgcaagtattacaagtgaaaggtgcagatggcatgatactg
gaaaggcctcaaggcagctctgccgaagattcccaggaagtggtctctgaatgccccagc
atggactccagtagcctggatttatccctccagctaggccaattagttctggaagagccc
cagagtccagcctcaagcagtactccttgcaaacctgtggtggacacagttgtgagtaca
gccagtgacattttgttggatgttgcacagagctctggggatggcagtggccttggactg
gaagacattacaggtcttaaatgttgttttgagtcagccagagaaggaaataagcagctc
atcaatgaagaaagattgctgaaatctgccagcatgggctccaaatgcagtactgatact
ttttattttatttcctcaacaacaaggatcaattttacaaagacttgtgcaaaattaaaa
gagcaggataaccaattcagagtaacatacgacatgattggaggcttaggtagtcaactg
gaagccattagaaaaataattgaaatgcctctcaaacagcctgaacttttcaagcattat
ggaattcctgctcctagaggagtattactctatggtcctccaggtactggaaagactatg
attgccagagctattgctaatgaagttggagcttatgtttctgtaattaatggacctgaa
attataagcaaattctatggtgagactgaagcaagattacgtcagatatttgctgaagcc
actttacggcacccatcgattatttttattgatgagctggatgcactttgtcccaaaaga
gaaggagctcaaaatgaagtggaaaagagagtggtggcttcccttttaacactgatggat
ggcattgggtctgaaggaagtgaaggacaggtattagtccttggagccaccaatcgccct
gaagcactggatgctgccctccgtagacctggacgatttgataaggagattgagatcgga
gttcctaacgctcaggaccggctggatattctgcagaagcttcttcaaaggctcccccac
ttgctcactgaagctgaactgatacagctggcaaatgatgctcatggatacgttggagca
gacttgaaagccttgtgtattgaagcaggtttctgtgctttgcgtagttttctgaagaag
cagcctaaccttcccgacagcaaggtggccagcttggtgaagatcactctgaatgatttc
ttgcagggaatgaaggacatcaggcccagcgctatgagggaggtagcaattgacgtccca
aatgtatcctggtcagatataggaggactggagaatgtgaagctgaaattgaaacaagct
gtggaatggcctttgaaacacccagagtcattcattcgaatgggtattcagccacctaag
ggagttcttctgtatgggccccctgggtgctctaaaacaatgatagccaaggctttggcc
aatgagagtggcctgaattttctagctataaaggggcctgaattaatgaataaatacgtt
ggtgagtctgaaagagcagttcgagagatcttcaggaaagcaagagcagtggccccttcc
attattttctttgatgaacttgatgctttggcagttgaaaggggcagttcttcaggttct
ggaaatgtggctgaccgcgttttggcacagctcttaacagaaatggatggaattgaacag
ttaaaggatgtgaccatcttggcagctactaatcgtccagataggattgataaggcgttg
atgcggcctggaagaattgacacaatcatctatgtgcctctcccagatggagcaacaaga
aaggaaatactcaccctgcagttccgctcaatgcctgtcagtaatgaagtggacctggat
gaacttgtcctccaaatggataagtactcgggggcagagattattgctgtctgcagagag
gccgctcttctagctctggaagaagacttcaaggtcaagtgcattatgaagagacatttc
actcaggccttgaggactgtgacacccagaatctctgagtccttgagacagttctacgaa
cattaccaggagaagagtgggctgcactctggaaaacatgcgcattcgttctactaa
DBGET
integrated database retrieval system
