Perognathus longimembris pacificus (Pacific pocket mouse): 125342031
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Entry
125342031 CDS
T08928
Symbol
Adamts2
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 2
KO
K08618
a disintegrin and metalloproteinase with thrombospondin motifs 2 [EC:
3.4.24.14
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125342031 (Adamts2)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.14 procollagen N-endopeptidase
125342031 (Adamts2)
Peptidases and inhibitors [BR:
plop01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
125342031 (Adamts2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Pep_M12B_propep
Reprolysin_5
Reprolysin_3
ADAMTS_CR_3
Reprolysin_2
TSP1_spondin
Reprolysin_4
Peptidase_M10
PLAC
DUF4953
Motif
Other DBs
NCBI-GeneID:
125342031
NCBI-ProteinID:
XP_048190120
LinkDB
All DBs
Position
25:complement(16062860..16205291)
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AA seq
1217 aa
AA seq
DB search
MDPPAGAARRPLCPALLLLLLLLPPPPPLLLLLPPPAIARVAVAAGPPGGPPGRGAERIL
AVPVRTDAQGRWVSHVVSLAAAGAGVRARRAAPLQTSGFPGGSGEDPGRHLFYNVTVFGR
DLHLRLRPNARLVAPGATVEWQEESGATRVEPLLGTCFYVGDVAGVAEASSVALSNCDGL
AGLIRMEEEEFFIEPLEKGLAEQEVEQGRVHVVYRRPPTPKPPPLGGPQVPDTGASWGNL
DSLSRALGVLEDRVNSSRRRARRHVTDDDYNIEVLLGVDDSVVQFHGKEHVQKYLLTLMN
IVNEIYHDESLGAHINVVLVRIILLSHAKSMSLIEIGNPSQSLENVCRWAYLQQKPDTDH
DEYHDHAIFLTRQDFGPSGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGM
EHDGQGNRCGDEVRLGSIMAPLVQAAFHRFHWSRCSQQELGRYLHSYDCLRDDPFAHDWP
ALPQLPGLHYSMNEQCRFDFGLGYMMCTAFRTFDPCKQLWCSHPDNPYFCKTKKGPPLDG
TMCAPGKHCFKGHCIWLTPDILKRDGNWGAWTPFGSCSRTCGTGVKFRTRQCDNPHPANG
GRTCSGLAYDFQLCNPQDCPDTLADFREEQCRQWDLYFEHGDAQHHWLPHEHRDAKERCH
LYCESKETGEVVSMKRMVHDGTRCSYKDAFSICVRGDCRKVGCDGVIGSSKQEDKCGVCG
GDNTHCKVVKGTFTRSPKKHDYIKMFEIPSGARHLLIQEADSASHHLSVKSLETGKFILN
EENHVDPNSRSFIALGVEWEYRNEDDRETLQTMGPLHGTITVLVIPEGDTRISLTYKYMI
HEDSLNVDDNNVLEDDSVRHEWALKKWSPCSKPCGGGSQFTKYGCRRKLDHKMVHRAFCG
ALPKPKAIRRACNPQECSQPVWVTGEWESCSQSCGRTGMQVRAVRCIQPLHNNTTRSVHT
KHCNDHRPESRRACNRELCPGRWRAGPWSQCSVTCGNGTQERPVLCRTGDDSFGICLEER
PETARICRLGPCPRNTSDPSKKSYVVQWLSRPDSDAPMAKISSKDHCQGDKSMFCRMEVL
SRYCSIPSYNKLCCKFCNLQSNLTQLDDRAEPPPGKHNDIEVFMPTLPGPTGATQAQPSP
GAPLEVPLNASRVNTSSTEDHPETNALDVPYKVHGLHDEAQPPNLIPRRPSPYEKTRNQR
IQELIDAMRKKEARRKP
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggatccgccggcgggagccgctcgccgcccgctctgccccgcgctgctgctgctgctg
ctgctgctgccgccgccgccgccgctcctcctgctgctgccgccgcccgcgatcgcccgg
gtcgccgtcgccgcgggccccccaggcgggcccccggggcgcggagccgagcgcatcctg
gcggtgcccgtgcgcactgacgcccagggccgctgggtgtcccacgtggtgtcgctggcg
gcggctggtgcgggggttcgagcccgcagggctgccccactccagacctcgggcttcccg
gggggcagcggggaggaccccggcagacacctcttctacaatgtcacggtcttcggccga
gacctgcacctacggctgcgacccaatgcccgcctcgtggctccaggggccacggtggaa
tggcaggaggagagcggtgccacccgtgtggaacccctgcttgggacctgcttctatgtg
ggggacgtggcgggcgtagctgaagcctcctccgtggcactcagcaactgcgatgggctg
gctggtcttattcggatggaggaggaagagttcttcattgagcctctggagaagggactg
gcagagcaggaggttgagcagggccgtgtacatgtggtatatcgccggccacccactccc
aagcctcctcctctggggggaccacaggtgccagacacaggagcctcctggggaaacctg
gacagcctgagccgagccctgggtgtcctggaggaccgtgtcaatagctctaggcgaaga
gcacgcaggcatgtgacagatgacgactacaacatcgaggtcctgctgggcgtggatgac
tctgtggtccagttccatgggaaggagcacgtgcagaagtacctactgacactaatgaac
attgtgaatgaaatctatcatgatgaatctttgggtgcccacattaatgtcgttctggtg
cggattatcctgctgagccatgccaagtctatgagcctcattgagatcgggaacccctct
cagagcctggagaatgtctgccgctgggcctacctgcagcagaagccggacacagaccat
gatgaataccacgatcatgccatcttcctcacccggcaggactttgggccttcaggcatg
caaggctatgctcctgtcactggcatgtgccacccggtccgcagctgcaccctgaaccac
gaggatggcttctcttcggcatttgtggtggctcacgagactggccatgtgctgggcatg
gagcacgacgggcagggcaaccgctgtggcgacgaggtgcggctgggcagcatcatggcg
cccctggtgcaggccgccttccaccgcttccactggtcccgctgcagccagcaggagctg
ggccgctacctgcactcctatgactgcctgcgggatgaccccttcgcccacgactggcca
gcgctgccccagctcccgggcctgcactactccatgaacgagcagtgtcgcttcgacttc
ggcctgggctacatgatgtgcacggcgttccggacctttgacccctgcaaacagctatgg
tgcagccaccctgacaatccctacttttgcaagaccaagaagggcccccccttggacggg
actatgtgtgcacctggcaagcattgctttaagggacactgcatctggctgacgcctgac
atcctcaaacgggatggcaactggggtgcctggactccatttggctcctgctcccgcacc
tgcggcacaggtgtgaagttcaggacccgccagtgtgacaacccacacccagccaacgga
ggccgcacctgctcaggccttgcctacgacttccagctctgcaacccccaggactgcccc
gacaccctggcagacttccgggaagagcagtgccggcagtgggacctgtactttgagcat
ggggatgctcagcaccactggctgccccacgagcaccgggatgccaaggagcggtgtcat
ctctactgcgagtccaaggagaccggggaggtggtgtccatgaagcgcatggtgcatgac
gggacacgctgctcctacaaggacgccttcagcatctgtgtgcgtggggactgcaggaag
gtgggctgtgacggggtgatcggctccagcaagcaggaggacaagtgtggcgtgtgtggt
ggggacaacacccactgcaaagtggtcaagggcacgttcacgcgctcacccaagaagcat
gattacatcaagatgtttgagatcccctcaggagccagacacctgctcatccaggaggca
gacagtgccagccaccatctgtccgtcaagagcctggagacaggcaagttcatcttgaat
gaagagaaccacgtggaccccaattccagatcgttcattgccctgggtgtggagtgggag
tacaggaatgaggacgacagggagacgctgcagaccatgggtcccctgcacggcaccatc
actgtgctggttatcccagaaggagacacccggatctcgctgacctacaagtacatgatc
cacgaggattcgctcaatgtcgatgacaacaatgtcctggaagatgactctgtgcgccat
gagtgggccctgaagaagtggtctccttgctccaagccctgtggtggagggtcccaattc
accaagtatggctgccgccggaaactggaccacaagatggtgcaccgagccttctgtggc
gccctcccaaagcccaaggccatccgccgagcctgcaacccacaggagtgctcccagccc
gtatgggtgacgggcgaatgggagtcctgcagtcagagctgcgggcggaccggcatgcag
gtgcgcgccgtgcgctgtatccagccgctgcacaacaacaccacccgctctgtgcacacc
aaacactgcaacgaccaccggcccgagagtcgccgggcctgcaaccgcgagctctgccct
ggtcgctggcgggctgggccctggtcccagtgctcggtaacctgtggcaacggcactcag
gagcggccagtgctctgtcgcacgggggatgacagctttggcatctgcctggaggagcgg
ccagagacagcccggatctgcaggctcggtccctgcccccgaaacacctcggatccatcc
aagaagagctacgtggttcagtggctctcccggcccgactcagatgcacccatggcgaag
atctcgtcaaaggaccactgccaaggcgacaagtccatgttctgtagaatggaagtcttg
tctcgctattgctccatcccaagctacaacaaactctgctgcaaattctgcaatctgcaa
agcaacctcacccagctggacgacagggcagagccaccgccggggaaacacaatgacatc
gaggtgttcatgcccacgcttccgggacccactggggccacgcaggcgcagccttcgccc
ggtgcccccctggaggtccctctcaatgcctcccgcgtcaacacctccagcaccgaggac
cacccagaaaccaatgctctagatgtcccctacaaggtccacggcctgcacgacgaagcc
cagccgcccaacttaatcccccgacgaccgagcccgtatgaaaagaccaggaaccaaagg
atccaggagctcattgatgcgatgcggaagaaagaggcacgccggaagccctaa
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