Perognathus longimembris pacificus (Pacific pocket mouse): 125342041
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Entry
125342041 CDS
T08928
Symbol
Pitx1
Name
(RefSeq) pituitary homeobox 1
KO
K09356
paired-like homeodomain transcription factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125342041 (Pitx1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125342041 (Pitx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125342041
NCBI-ProteinID:
XP_048190133
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All DBs
Position
25:complement(4989095..4994358)
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AA seq
315 aa
AA seq
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MDAFKGGMSLERLPEGLRPPPPPPPHDMGPAFHLARAADPREPLENSASESSDTELPDKE
RGGEPKGPEDGGAGGAGCGGPEDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMR
EEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGGYVPQFSGLVPPYEDVYAAGY
SYNNWAAKSLAPAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGAVPGMPN
SGLNNINNLTGSSLNSAMSPGACPYGAPASPYSVYRDTCNSSLASLRLKSKQHSSFGYGG
LQGPASGLNACQYNS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaaggggggcatgagcctggagaggctgccggaggggctgcggccgccg
ccgccgccgccgccgcacgacatggggcccgccttccacctggcccgcgccgccgacccc
cgcgagccgctggagaactcggccagcgagtcctcagacaccgagctgccagacaaggag
cgcggtggggagcccaaaggcccggaggacggcggcgcgggcggcgcgggctgcggaggc
cccgaggaccccgccaagaagaagaagcagcggcggcagcgcacgcacttcaccagccag
cagctgcaggagctggaggccacgttccagaggaaccgctaccccgacatgagcatgcgg
gaggagatcgccgtgtggaccaacctcaccgagccgcgcgtgcgggtctggttcaagaac
cggcgggccaagtggaggaagcgcgagcgcaaccagcagctggacctgtgcaagggcggc
tacgtgccgcagttcagcggcctggtgccgccctacgaggacgtgtacgccgccggctac
tcctacaacaactgggccgccaagagcctggcgcccgcgccgctctccaccaagagcttc
accttcttcaactccatgagcccgttgtcctcgcagtccatgttctccgcccccagctcc
atctcctccatgaccatgccgtccagcatgggcccgggcgccgtgcccggcatgcccaac
tcgggcctcaacaacatcaacaacctcaccggctcctcgctcaactcggccatgtccccc
ggcgcctgcccctacggggcgcccgcctcgccctacagcgtctaccgggacacgtgcaac
tccagcctggccagcctgcggctcaagtccaagcagcactcgtccttcggctacggcggc
ctgcagggcccggcctcgggcctcaacgcgtgccagtacaacagctga
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