Perognathus longimembris pacificus (Pacific pocket mouse): 125342425
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Entry
125342425 CDS
T08928
Symbol
Poc1a
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125342425 (Poc1a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125342425 (Poc1a)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125342425 (Poc1a)
Cilium and associated proteins [BR:
plop03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125342425 (Poc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
Cytochrom_D1
DUF4908
Motif
Other DBs
NCBI-GeneID:
125342425
NCBI-ProteinID:
XP_048190531
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All DBs
Position
26:7722334..7755030
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AA seq
408 aa
AA seq
DB search
MAAPAQEDPSLERHFKGHRDAVTCVDFSLNTKHLASSSMDSCLMVWHMKPQSRAYRFTGH
KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCGDGQSFVT
ASDDKTIKVWSTHRQRFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECI
YSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKLWDVRTHRLLQHYQLHSAAVNSLSFHPS
GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS
NFDAVDYGEILKGQPPPATLASSARSLPEVDLPAPPGRVKSAETVQNQPREPIMSMPQTL
TTTLEHIVSQLDVLTQTVSILEQRLTLTEDKLKQCLQNQQLIMQRETP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgctcaggaggacccctccctggagagacattttaagggccaccgcgat
gcagttacctgcgtggacttcagtctcaacacgaagcacctggccagcagttccatggac
tcgtgcctgatggtctggcacatgaagccccagtcccgcgcctaccgcttcaccggccac
aaggacgccgtcacctgtgtgaacttctctccctccggacacttgctcgcctcaggttcc
cgggacaagacggtccgcatctgggtacccaacgtcaagggcgagtcgactgtgtttcgt
gcacacacagccacagtgaggagtgtccacttctgcggcgatggccagtcctttgtgaca
gcatctgatgacaagacgatcaaggtgtggtctactcatcgccagaggttcctcttctcc
ctgagccagcacatcaactgggtccgctgtgcccggttctcccctgacgggcggctcatc
gtgtccgctagcgacgacaagaccgtcaagctgtgggacaagaccagccgggaatgcatc
tactcgtactgcgagcacggcgggttcgtcacttacgtggatttccacccgagcgggacg
tgcatcgccgccgccggcatggacaacacagtgaagctgtgggacgtgaggactcaccgg
ctgctgcagcattaccagctgcacagcgcagccgtgaactccctctccttccacccctcc
ggaaactacctgatcacagcctccagcgactccacgctgaagatcctggacctgatggag
ggccggctcctctacacgctccacggccaccagggacctgccaccacggtcgccttctca
agaaccggggagtattttgcctctggaggctccgatgaacaggtaatggtttggaagagt
aacttcgatgctgttgattacggagaaatcctaaaagggcagccgcccccagccacactg
gccagctcggcaaggagtctgccagaggtggatttgccagccccaccgggccgagtcaag
agtgcggagacggtacagaaccagccccgggagcccatcatgagcatgccccagacgctg
accaccacgctggagcacatcgtgagccagctggacgtcctcactcagacagtgtccatc
ctggagcagcggctgacgctgacggaagacaagctgaagcagtgtctgcagaaccagcag
ttaatcatgcaaagggaaacgccgtga
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