Perognathus longimembris pacificus (Pacific pocket mouse): 125353391
Help
Entry
125353391 CDS
T08928
Symbol
Itch
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy homolog isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
plop04144
Endocytosis
plop04330
Notch signaling pathway
plop04668
TNF signaling pathway
plop04932
Non-alcoholic fatty liver disease
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125353391 (Itch)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125353391 (Itch)
04668 TNF signaling pathway
125353391 (Itch)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125353391 (Itch)
09160 Human Diseases
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
125353391 (Itch)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125353391 (Itch)
04121 Ubiquitin system [BR:
plop04121
]
125353391 (Itch)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125353391 (Itch)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125353391 (Itch)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
HECT type E3
125353391 (Itch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
125353391
NCBI-ProteinID:
XP_048204989
LinkDB
All DBs
Position
6:68679807..68755285
Genome browser
AA seq
908 aa
AA seq
DB search
MFIMVIFIMLHSYHTKVTCISQWPSGDSALIQRSDLSREVQVCCPVGGMSDSGSQLGSMG
SLTMKSQLQITVISAKLKENKKNWFGPSPYVEVMVDGQSKKTEKCNNTNSPKWKQPLTVI
VTPVSKLHFRVWSHQTLKSDVLLGTAALDVYETLKSNNMKLEEVVVTLQLVGDKEPTETI
GDLSICLDGLQLDAEVVINGETTCSESTSQNDDGSRPKDETRVNTSGSDDPEDAESGENR
RINGNNSPSLSNGGFKPSRPPRPSRPPPPTPRRPASVNGSPSITSESDGSSTGSLPSTNT
NTSEGATSGLIIPLTISGGSGPRPLNPVTQAPLPPGWEQRVDQHGRVYYVDHVEKRTTWD
RPEPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFN
QRFIYGNQDLFATSQNKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQL
NEKPLPEGWEMRFTVDGIPYFVDHNRKTTTYIDPRTGKSALDNGPQIAYVRDFKAKVQYF
RFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVARE
WFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFI
DTGFSLPFYKRILNKPVGIKDLESIDPEFYNSLIWVKENNIEECGLEMYFSVDKEILGEI
KSHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDA
KELEVLLCGMQEIDLNDWQRHAIYRHYTRTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTC
RLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIE
ETEGFGQE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtttataatggtcatcttcattatgttacatagctatcataccaaggtaacatgcatt
tcacagtggccttctggagacagcgccttaatccaaagaagtgacttgagcagagaagtt
caggtttgctgtcctgttggtggtatgtctgacagcggatcacagcttggttcaatgggt
agcctgaccatgaaatcacaactgcagatcactgtcatctcagcaaaacttaaagaaaat
aaaaagaattggtttggaccaagtccttatgtagaagtcatggtagatggacagtcaaag
aagacagaaaagtgcaacaatacaaacagtcccaaatggaagcaacctcttacggttatt
gttacacctgtgagtaaattacattttcgtgtgtggagtcaccagacactgaaatctgac
gttttgttgggaactgctgcattagatgtttatgaaacattaaagtcaaacaatatgaaa
cttgaagaagtggttgtgactttgcagcttgtaggtgacaaagagccaacagagacaata
ggagacttgtcaatttgtcttgatgggctgcagttagatgctgaagttgttattaatggt
gaaactacgtgttcggaaagtacttcacagaatgatgatggctctagacccaaggatgaa
acaagagtgaacacaagtggatcagatgaccctgaagatgcagaatctggtgaaaatagg
agaatcaatgggaacaattctccatcactctccaatggtggttttaagccttctagacct
ccaagaccttcacgaccacctccacccacacctcgaagaccagcatctgtcaatggctca
ccatctatcacttctgaaagtgatggatctagtacaggttctctgccatcaacaaataca
aatacctctgaaggagcaacatctggattaataattcctctaactatatctggaggctca
ggccctaggccattaaatcctgtaactcaagctcctctaccacctgggtgggagcagaga
gtggaccagcatgggcgagtttattatgtggatcatgttgaaaaaagaacaacatgggat
agacctgaacctctacctcctggctgggagcggcgggttgacaatatgggacgcatttat
tatgttgaccattttacaagaacaacaacatggcagaggccgacactggaatctgtccgc
aactatgaacagtggcagctacaacgtagtcaacttcaaggagcaatgcagcagtttaat
cagagatttatttatgggaatcaagatttatttgctacttcacaaaataaagaatttgat
cctcttggtcctttgccacctggatgggagaagagaactgatagcaatggcagagtatat
tttgtcaaccataatactcgaattactcaatgggaagacccccggagtcaaggtcagtta
aatgaaaagcccctacctgaaggctgggaaatgagattcacagtggatgggattccatat
tttgtggaccacaacagaaaaacaacaacctacatagatccccgcacaggaaaatctgcc
ttagacaatggaccccagatagcctatgttcgagacttcaaagcaaaggttcagtacttt
cggttttggtgtcagcaactggccatgccacagcacataaagattactgtgacaagaaaa
acattgtttgaagattcctttcaacagataatgagcttcagtccccaagatctacgaaga
cgtttgtgggtgatttttccaggagaagaaggtttagattatggaggtgtagcaagagaa
tggttctttcttttgtcacatgaagtgttgaaccccatgtattgcctgtttgaatacgca
gggaaggataactactgcttgcagataaaccctgcgtcttacatcaatcccgatcatttg
aaatattttcgctttattggcaggtttattgccatggctctattccatggaaaatttata
gacacaggtttttccttaccattctataaacgtatcctgaacaaaccagttggaattaag
gatttagaatccattgatccagaattttacaattctctcatctgggttaaagagaacaat
attgaagaatgtggtttggaaatgtacttctctgtggataaagaaattttaggtgaaatt
aagagccatgatttgaaacccaatggtggcaatattcttgtgacagaagaaaacaaagag
gaatatatacgaatggtagctgagtggaggttgtctcgaggagttgaagaacagacacaa
gctttctttgagggctttaatgaaattcttccccagcagtatttgcagtacttcgatgca
aaggaattagaggtactcttatgtggaatgcaagagattgatttgaatgactggcaaaga
catgctatctaccgtcattacactaggacaagcaaacagattatgtggttttggcagttt
gttaaagaaattgataatgagaagagaatgagacttctgcaatttgttactggaacctgt
cgattgccagtaggaggatttgctgacctcatggggagcaatggaccacagaaattctgc
attgaaaaagttgggaaagaaaattggttacccagaagtcacacctgttttaatcgcctg
gaccttccaccctacaagagctatgagcaactgaaggagaagctgttgtttgccattgaa
gaaacagaaggatttggacaagaataa
DBGET
integrated database retrieval system
