Perognathus longimembris pacificus (Pacific pocket mouse): 125354596
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Entry
125354596 CDS
T08928
Symbol
Prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00310
Lysine degradation
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125354596 (Prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125354596 (Prdm2)
03036 Chromosome and associated proteins [BR:
plop03036
]
125354596 (Prdm2)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
125354596 (Prdm2)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125354596 (Prdm2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125354596 (Prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-H2C2_2
zf-C2H2_11
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
125354596
NCBI-ProteinID:
XP_048206229
LinkDB
All DBs
Position
7:8422773..8516742
Genome browser
AA seq
1733 aa
AA seq
DB search
MLFWYEPLSLGLQNPTEPAAATETLDEVPEHVLRGLPEEVRLLPSAVDKARIGVWATKPI
LKGKKFGPFVGEKKKRSQVKNNVYMWEVYYPNLGWMCVDATDPEKGNWLRYVNWACSGQE
QNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKCRK
GKKKSQENKNKGNKAHNIQLKASDPDSTCANMRDSEEGPEEEEERPLASVPEKPALVPEV
VSQDLPPELVAPLPACEPQPEPAGKQATGCEVNDVEEVEEEEEEEEEEEEMDGEEDELEE
DGEEEADMPNESSVIEPEIRCDEKLEDLLEEPKTISKEIPEDSGEVPPLTKAPRTKEEAN
GDVLDTFMFPCQHCERKFTTKQGLERHMHIHMSTVNHAFKCKYCGKAFGTQINRRRHERR
HEAGLKRKPSLALQPPEDLADGKASGEKAPPKDESNPPPLGQDCLTLNSEKASQETVNSS
AVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLVEEPQPPAEQ
AQPTQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNSSTSNCDVIEMES
NSADLYGINCLLTPVTVEITQNIKTTQVPVTDDLPKEPPSSTNCESKKRRTASPPVLPKI
KMEMDPEPVAPPCSLTLPLSVATTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPPAGVSAT
EIPKLGPVCVSAPASMLPGTSSRFKRRTSSPPSSPQHSPALRDFGKPSDPKVVWTDAVLT
SKKPRLESHGDSPAWTLSGRDERETGSPPCFEEYKMSKEWAASSTFSSVCNQQPLDLSSG
MKQKTEGTGKTPVQWEAVLDLSVHKKPCLDLEGKEFKENHLAPPACSAGKKKKPTTCMLQ
KVLLNEYNGIDVPGEAAPDVARSPSPCKPVDAQADPDLGPDSGFSAPAVESPPEACPSSP
TLQTASLSSSQLPPLLVPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSCNASPHPCPS
PLSNATAQSPLPILSPTVSPAPSPIPPVEPLVSAASPGPPKLSSSSSSASSAAAASSSSS
SFSSSPASSSPSPPPLSAVSSVASSGDNLEASLPSITFKQEELETEGVKPREEPQPTVEQ
DVIQETFSKNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKAKTDLSEHRFM
LHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHME
HMQDLPEDPLEPSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPF
QYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKR
YTPKKNPVPLKQTVQPKNGVVVSEGPGKNAFRRMGQPKRLNFSVELSKMSPNKLKLNALK
KKNQLVQKAILQKNKSAKQKADLRNASESSSHICPYCNREFTYIGSLNKHAAFSCPKKPL
SPSKRKASHSKKGGHPSSASGEKNHSSNHRRRTADAEIKMQSTQAPLGKTRARSSGPGQV
ALPSSSFRSKQNVKFAASVKAKKPNSSSLRNSSPVRMAKMTHMEGRKSKAVAKNHAASLS
SKSSRTLHVRVQKSKAVLQSKSALASKKRTDRFNVKSRERSGGPITRSLQLAAAADLSEN
RSEDSSARHELKDFSYSLRLASRSAPAAAYITRQCRKVKAAAAAQFQAPFLKE
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgctcttttggtatgagcctctgtctcttggtttacagaatcctactgagcctgcggca
gccactgagaccctggatgaggtacctgagcatgtgttgcgaggacttccggaggaagta
aggcttttaccctctgctgtggacaaggcccggattggtgtctgggccactaaaccaatt
ttaaaagggaagaagtttgggccattcgttggtgaaaagaagaaaagatctcaggtgaag
aacaatgtatacatgtgggaggtgtactacccgaacctggggtggatgtgcgtcgatgcc
acggatccagagaagggaaactggctgcgctatgtgaactgggcttgctcgggacaagag
cagaatttgtttccactggagatcaacagagcaatctactataaaactttgaagccaatc
gcgccgggcgaggagctgctggtctggtacaatggggaagacaaccccgagatagcagct
gcgattgaggaagagcgagccagcgcccggagcaagcggagctccccgaagtgccggaaa
gggaagaaaaaatcccaggaaaataaaaacaaaggaaataaagcccacaatatacagctg
aaagccagtgatccagattccacctgtgcaaatatgagagactctgaagaaggtcctgaa
gaagaggaagagaggcctttggcttcagtgcctgaaaagccagctcttgtcccagaggtg
gtgagtcaggacctgcctccagagctggttgctcctctccctgcctgtgagccacagcca
gagccagccgggaaacaagccacaggctgtgaggtcaatgatgtggaagaagtggaagag
gaggaggaggaagaggaggaggaagaggagatggatggtgaggaggatgagctggaagaa
gatggggaggaagaagctgacatgccgaacgaaagctctgtaatagaaccagaaatacgg
tgtgatgagaagctagaggatttgttagaagaaccaaaaaccatttcaaaagaaatcccc
gaagactctggggaagtgccacctcttaccaaagcccccagaactaaggaggaagccaat
ggggatgtgcttgacacgttcatgtttccttgtcagcattgtgaaaggaagtttacaacc
aagcaggggctcgaacgccacatgcatatccacatgtctacggtcaatcatgctttcaag
tgcaagtactgtgggaaggcatttggcacacagatcaacaggaggcggcatgagcgtcgc
cacgaagcagggttaaaacgaaaacccagcctggctctacaaccaccagaagacctggct
gatggcaaagcttccggagaaaaggctcctcctaaagatgaatcaaatccccctccactt
gggcaagactgtttgaccttgaactcagagaaagcctcccaggaaacagtgaattcttct
gctgtagaggagaacggggaagtgaaagaacttcatccatgcaaatactgtaagaaggtt
ttcgggacgcataccaatatgagacggcatcagcgcagagttcacgaacgccacctgatt
cccaaaggcgtccggcggaaaggaggccttgtggaagagccgcagcccccggcagaacaa
gcccagcccacccagaatgtctacgttccaagcaccgagccagaggaggaaggagaggca
gatgatgtgtacatcatggacatttctagcaatatctctgaaaacttaaattactacatt
gacggtaagattcagaccaacagcagcactagtaattgtgacgtaattgagatggagtct
aattcggcagacttgtatggcataaattgtcttctcactccagttacggtggagattact
caaaatataaagactacccaggtcccggtgaccgatgatcttccaaaggagccccccagc
agcacaaactgtgagtccaagaaacggaggactgccagtccacccgtgctccccaagatt
aaaatggaaatggatcctgagcctgtggccccaccgtgctccttaactctaccacttagt
gtagcaacgaccgaggcagtgtctttccataaagagaagagtgtgtatttgtcatcaaag
ctcaagcagcttctccaaacccaggacaagctgactcctcctgcaggggtgtcagctact
gagatccctaagttaggtcctgtgtgtgtgtctgcaccggcttccatgttacctgggacc
tccagtcgatttaagaggcggaccagctccccacccagctctcctcagcacagccctgcc
cttcgggactttgggaagccaagtgatccgaaagtggtgtggacagatgcagttctgact
tccaagaagcccaggttagaaagccatggcgactcgcctgcctggactttgtctggaaga
gatgagagagaaactgggagccctccttgctttgaagaatacaaaatgtcaaaagagtgg
gcagcctcctctactttcagcagtgtgtgcaaccagcagcccctggatttgtccagcggc
atgaaacagaagacggaaggcacaggcaagaccccagtccagtgggaggctgtcttagat
ctcagtgtgcataaaaagccttgtctggaccttgagggcaaggaattcaaagaaaaccat
ttggcaccgccagcatgtagtgctggaaagaaaaagaaaccaaccacgtgcatgctgcag
aaggtcctgctcaacgaatacaacggcatcgacgtgcctggggaagccgctcccgacgtg
gccaggagcccgagtccttgtaaacccgttgatgcccaggcggaccctgacctgggtccc
gactctggcttctctgcccctgctgtggagtccccacctgaagcctgtccttcatcaccc
accctccagaccgcttccctgtcttctagtcagctgcctcctctcttggtccccacagac
ccgtcttctcctccaccctgccctcctgtgttaactgttgccaccccgccccctccgctg
ctgcctactgtccctcttcctgccccctcgtgcaatgcctctcctcacccatgcccctct
ccactctcaaatgccaccgcccagtctccccttccgattctgtccccaacggtgtctcct
gccccctctcccattcctcccgtggagccacttgtgtctgctgcttctcctgggcctcca
aagctttcttcctcctcctcctctgcctcctccgccgccgctgcctcctcctcctcctcc
tcattctcgtcttcccctgcctcctcctccccttcaccaccccctctgtcagcagtgtct
tcggtcgcttcctctggggacaatctggaggcttctctcccttcaataactttcaaacag
gaggagttggagactgaaggtgtaaagcccagggaagagccccaacctacagttgaacag
gatgtcattcaggaaacatttagcaaaaactttgtttgcaatgtctgtgaatcacctttt
ctttccattaaagatctaaccaagcatttatctattcatgctgaagaatggcccttcaaa
tgtgaattctgtgtccagctttttaaggctaaaactgatttatcagagcatcgctttatg
cttcatggagttgggaatatctttgtgtgttccgtatgtaaaaaagaatttgcttttttg
tgcaatttacagcaacaccagcgagatcttcacccagacaaggtgtgcacacaccacgag
ttcgaaagcgggaccttacgaccccagaactttacagaccccagcaaggcccacatggag
catatgcaggacttgccagaagatcctctggaaccttctaaagaagaggaggaattaaat
gattcctctgaggagctttataccaccataaaaataatggcttctggaataaagacgaaa
gatccagatgttcgattgggtctgaatcagcattacccaagctttaagccacccccattt
cagtaccatcaccgaaatcccatgggtattggggtgacagccacaaacttcactacccac
aatatcccacagactttcaccacagccatccgctgcacaaaatgtgggaaaggtgttgac
aacatgcctgagttgcacaaacacatcctggcatgtgcctctgccagcgacaagaagaga
tacacccccaagaaaaaccccgtacctttgaaacaaactgtgcagcccaaaaacggagtg
gttgtgtcagagggtcctgggaaaaatgccttcagaagaatggggcagcccaaaagactg
aacttcagtgtggagctcagcaaaatgtcaccaaacaagctgaaattaaatgccttgaag
aagaaaaatcagcttgtccagaaagcaatccttcaaaaaaacaaatctgccaagcagaag
gctgacttgagaaacgcttccgagtcgtcctcacacatctgcccctactgcaacagggag
ttcacgtacattggcagcctgaacaagcacgccgctttcagctgtcccaaaaagcccctt
tctccttccaaaagaaaagcttctcactccaagaaaggtggccacccctcttctgccagt
ggagagaagaatcacagcagcaaccaccgccggcggaccgcagatgccgagatcaagatg
cagagcacgcaggcgcctctgggcaagaccagagctcgcagctcaggccctggacaagtc
gcgctgccctcctcatccttcaggtccaagcagaacgtcaagtttgcagcttcggtcaag
gccaaaaaaccaaactcctcctctttaagaaactccagcccagtaagaatggccaaaatg
acccacatggagggcaggaaatccaaagctgtggccaagaaccatgctgcttcactctca
agcaaatcgtcccggaccctgcacgtgagggtacagaaaagcaaagctgttttgcaaagt
aagtctgctctggcgagtaagaagagaacagaccggttcaatgtaaaatctagagaacgg
agtgggggcccgattacccgaagccttcagctggcagctgctgcggatctgagtgagaac
aggagcgaggacagcagtgccaggcacgagctgaaggacttcagctacagcctccgcctg
gcatcccggagcgccccggcggccgcctacatcaccaggcagtgccggaaggtcaaggcc
gcggccgcggcccagttccaggcgcctttcctcaaggagtag
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