Perognathus longimembris pacificus (Pacific pocket mouse): 125358737
Help
Entry
125358737 CDS
T08928
Symbol
Tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125358737 (Tmf1)
Membrane trafficking [BR:
plop04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125358737 (Tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Vps27_GAT-like
Motif
Other DBs
NCBI-GeneID:
125358737
NCBI-ProteinID:
XP_048212084
LinkDB
All DBs
Position
10:complement(57272169..57297053)
Genome browser
AA seq
1102 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQDEEPGAWADTIPYGEPGLSPPASGGWDTS
TWGLKSNTEPQSPPTASPKAITKPVRRTVVDESESFFSAFLSPTDVQTTQKTPVVSKPPA
KSQRPEEEVKSTLHESLFSGQSGAAETTESEVRDPVCVPGKTVVVESPSPQTEGKHEETV
DKESEMKVPAVCLKVSENVLNAKTPSESVSNMTAPSLTAETKDMALEAKEQKHEDRQSNT
PSPPASTFSSGTSTTSDIEVLDHESVISESSASSRQETTDAKSSLHLMQTSFQLLSASAC
PEYNRLDDFQKLNESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELSGKGYALVPIIVN
SSTPKTKIVDSVEGKTEEEVNDETLVIPTEEAEMEESGRSATPVNCEQPDTPVEQPDTLV
ASVPTSEGCDPGLEEGSEQCEVAESQPEALSEKEDVCKTIEFLNEKLEKREAQLLSLSKE
KALLEEAYDNLKDEMFRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAARKEIKNM
KEELATRLNSSETADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRIKDKESETTIV
KLNKKAKEQEEELQHLKQVLDGKEEVEKQHRENIKKLNSVVERQEKDLGRLQVNMDELEE
KNRSIQAALDSAYKELTDLHKANAAKDSEAQEAALSREMKAKEELSAALDKVQEEARQQQ
ETLAIQVGDLRLALQRAEQAAARKEDYLRHDISELQQRLQEAENRNQELSQSVSSTTRPL
LRQIENLQATLGSQTSSWEKVEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSAV
ESQNALLRQENSRFQAQLESEKSKLRKLEDENNRYQVELENLKDEYVRTLEETRREKTLL
NSQLEMEKLKVEQERKKAIFTQEAMKEKEQKLFSVSSTPTMSRSSSISGVDMAGLQTSFL
SQDESHDHSFGPMVTSASGSNLYDAVRMGAGSSIIESLQSQLKLREGEITHLQMEIGNLE
KTRSIMAEELVKLTNQNDELEEKVKEIPKLRTQLRDLDQRYNTILQMYGEKAEEAEELRL
DLEDVKNMYKTQIDELLRQRLS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctctccagcttcgccaagcaggcgctgtcccaggcc
cagaagtccatcgaccgggtcctggacatccaggacgaggagccgggcgcctgggccgac
accattccctacggagagccgggcttaagtccccctgccagtggaggatgggacacttca
acctggggattgaagtccaacactgaaccacagagtccaccaacggcctctcctaaagcc
attacaaagcctgtgagaaggactgtagtagatgaatctgaaagtttcttcagtgccttt
ctctctccaacggatgtccaaactactcagaagactccggtggtatcaaagcctccagcg
aaatcacaacgaccggaagaagaagtgaaaagcactttacatgaatccttgttctctgga
caatcaggagctgcagagacaactgagtcagaagtgagagacccagtgtgtgtaccaggg
aaaactgtggtggtagagtctccatcacctcaaactgaaggcaaacatgaagaaactgtt
gataaagagtctgagatgaaggtacctgctgtatgcttgaaggtgtctgagaacgtgctt
aatgcaaaaacaccttcagagagtgtatctaacatgactgcaccgtctctcacagcagaa
acaaaggacatggctttggaagcgaaggagcagaaacatgaagacagacagagcaacaca
ccctctcctcctgctagtactttctcctcaggtacttctaccactagtgatattgaagtt
ttagatcatgaaagtgtaataagtgagagctcggcaagttcaagacaggagactacagat
gccaaatcaagtcttcacctgatgcagacatcttttcagcttctctctgcatctgcttgt
cctgaatataatcgtttagatgatttccagaagctcaacgagagttgctgctcatcggat
gcttttgaaagaattgactcatttagtgtacagtcgttagatagccgaagtgtcagtgaa
atcaattcagatgatgagctgtcaggcaagggatatgctttagtgcccattatagttaac
tcttcaactccaaagactaaaatagttgactctgttgagggaaaaactgaagaagaagtt
aatgatgaaacattagttataccgactgaggaagcagaaatggaggaaagtggacgcagt
gccacacctgttaactgtgaacagccagatacaccggttgaacagccagatactctggtg
gcttctgtgcccacaagtgaaggatgtgatcctggcttagaagagggatctgagcagtgt
gaagtggcagaaagtcagccagaagctctttctgagaaggaggatgtttgcaagaccatt
gaatttctgaatgagaaactggaaaaaagggaggctcagttattatctcttagtaaagaa
aaagcacttttagaagaagcttatgataatttgaaagatgaaatgttcagagtcaaagaa
gagagcagcagcatttcttccttgaaagatgagtttactcagaggattgcagaagcagaa
aagaaagtgcaactagcctgcaaagagagagacgctgctagaaaggaaataaaaaatatg
aaagaagaacttgctactagattaaatagtagtgaaactgcagaccttttgaaagagaaa
gatgaacagattcaaggcttaatggaagaaggagaaaaactttcaaagcaacagctacat
aattctaatattattaagaaattaagaattaaagacaaagaaagtgaaactactattgta
aagctgaacaaaaaagctaaagagcaagaagaagaattgcagcatttaaaacaggtcctt
gatggcaaagaagaagttgagaaacaacatagagaaaacattaagaaactaaattctgtg
gtagaacgccaagagaaagatcttggccgccttcaagtaaacatggatgaacttgaagaa
aagaaccgcagtattcaggctgccctggatagtgcatacaaagaacttacagatcttcac
aaagccaatgctgcaaaggatagtgaggcacaggaagctgctctgagtcgtgaaatgaaa
gctaaagaagaactttctgcagccctagataaggttcaagaggaagcccgtcagcaacaa
gaaacattagcaattcaagtgggggacctgagactggcactgcaacgtgcagagcaagca
gctgctagaaaagaggattatttacgccatgacatcagtgagcttcagcagagactccag
gaagcagagaatcgaaaccaagaactgagtcaaagtgtttcatcaacaacaaggccactt
cttcgtcaaatagaaaatttgcaagctaccttagggtcccagacatcatcgtgggagaag
gtggagaagaatctttctgacaggcttggtgaatcccaaaccttgttggcggcagcagtt
gaaagagagcgtgcagctaccgaagaactccttgccaacaaaattcagatgtctgcagtg
gaatcacagaatgctctcttaagacaggaaaacagtagatttcaagcccaactggaatca
gagaaaagtaagctaagaaaactagaggatgaaaataatcggtaccaggttgaattagaa
aacctaaaagatgaatatgtaagaacactggaagagacaaggagagaaaagacgctgttg
aatagtcagttagaaatggaaaaactgaaagttgaacaagaaaggaagaaagccattttc
acccaggaagcaatgaaagagaaggaacaaaagctattttccgtttccagcactcccacc
atgtcacgctcaagttcaataagtggagttgatatggcagggctacagacatcttttctg
tctcaggatgagtctcatgatcattcatttggaccaatggttacatcagccagtggaagc
aacctttatgatgctgtgaggatgggagctggatcgagtattattgaaagtctgcagtct
cagctgaagctacgcgaaggagaaattacccatttacagatggaaattggcaatctagaa
aaaactcgatcaattatggcagaagagttagttaaattaacaaatcaaaatgatgaactt
gaggagaaagtaaaggagatacccaaacttcgtactcagttaagagatttggatcaaaga
tacaacactattctgcagatgtatggagagaaagcagaagaagcagaagaacttcgttta
gatcttgaagatgtaaaaaatatgtacaaaactcaaatagatgaacttttgagacaaaga
ctgagttaa
DBGET
integrated database retrieval system
