Perognathus longimembris pacificus (Pacific pocket mouse): 125360245
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Entry
125360245 CDS
T08928
Symbol
Cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04010
MAPK signaling pathway
plop04020
Calcium signaling pathway
plop04930
Type II diabetes mellitus
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125360245 (Cacna1e)
04020 Calcium signaling pathway
125360245 (Cacna1e)
09160 Human Diseases
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
125360245 (Cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125360245 (Cacna1e)
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125360245 (Cacna1e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125360245
NCBI-ProteinID:
XP_048214226
LinkDB
All DBs
Position
11:complement(20686561..21000789)
Genome browser
AA seq
2315 aa
AA seq
DB search
MARFGEAVVGRPGSGDGDSDQSRNRQGTPVPASGPAAAYKQSKAQRARTMALYNPIPVRQ
NCFTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPM
SRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHF
NTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHRACFMNNSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVL
TVFQCITMEGWTTVLYNTNDALGAAWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERER
VENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNAGTSALEVLRRATIKRSRT
EAMTRDSSDEHCADISSVGTPLARASIKSTKVDGASYFRHKERLLRISIRHMVKSQVFYW
IVLSLVALNTACVAIVHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSF
NCFDFGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSM
KSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWN
EVMYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEE
EAFNQKHALQKAKEVSPMSAPNMPSMERDRRRRHHMSMWEPRSSHLRERRRRHHMSVWEQ
RTSQLRRHMQMSSQEALNKEEAPPMNPLNPLNPLSPLNPLNAHPSLYRRSRPIEGLTLGL
GLEKCEEERISRGGSLKGDGGDLTSALDNQRSPLSLGKREPPWLSRPCHGNCDPSQQEAG
GGETVVTFEDRARHRQSQRRSRHRRVRTEGKESSSASRSRSASQERSLDEVVSTEGEKEH
ESRGSHGGKEPTIHEEERTQDLRRTNSLMVPRGSGLAEALDEANTPLVMPQPELEVAKDA
VLTEQEPEGSSEQALLGNVQLDVGRGISQSEPDLSCITANTDKAATESTSVTVAIPDVGP
LVDSTVVHISNKTDGEASPLKEAEVKEEEEEEVEKKKKKKERRETGKAMVPHSSMFIFST
TNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFT
FEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDIKTIKSLR
VLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYC
TDSSKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVL
QHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECS
LEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMK
YYSAPCTYELALKYLNIAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITEII
LTDSKLVNTSGFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLF
FIYAIIGMQVFGNIKLDEESHINRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGC
EPDTTAPSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGP
HHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVA
EDMTVHFTSTLMALIRTALDIKIAKGGADRQQLDSELQKETLAIWPHLSQKMLDLLVPMP
KASDLTVGKIYAAMMIMDYYKQSKVKKQRQQLEEQKNAPMFQRMEPSSLPQEIIANAKSL
PYLQQDAVSGLSGRSGYPSMSPLSPQEIFQLACMDPADDGQFQEQQSLEPEVSELKSMQS
SNHGIYLPSDTQEHAGSGRASSMPRLTMDPQVVTDPSSMRRSFSTIRDKRSNSSWLEEFS
MERSSENTYKSRRRSYHSSLRLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVS
RCNSEERGNQGDWESPERRQSRSPSEGRSQTPNRQGTGSLSESSIPSISDTSTPRRSRRQ
LPPVPPKPRPLLSYSSLMRHAGSISPPADGSEGGSPLTSQVLESNNARLTESSNSPHSQQ
GQHSSPQHYISEPYLALHEDSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQM
PNGHYRRRRRGGPGPGMMCGAVSDLLSDTEEDDKC
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggggaggcggtggtcggcaggcctgggtccggcgatggagactcggac
caaagcaggaaccgtcaaggaaccccggtgccggcctcagggccagcggccgcctacaag
caatccaaagcgcagagggcgcggactatggctttgtacaaccccattcctgtccggcag
aactgtttcaccgtcaacagatccctgttcatttttggagaagataacattgtcaggaaa
tacgccaagaagctcatcgattggccgccctttgaatacatgatcctggccaccattatt
gccaattgtatcgtcttggccttggagcagcatctccctgaggatgacaagaccccgatg
tcccgaagactggagaaaacagaaccatatttcattgggattttctgctttgaagctggg
atcaaaattgtggccctggggttcatcttccataagggttcatatctccgcaatggctgg
aatgtcatggactttattgtggtcctcagtggcatcctggccactgcaggaacgcacttc
aacacgcatgtggacctgaggaccctccgggctgtgcgtgtcctgaggcccttgaagctt
gtgtcaggaatacctagcctgcagattgtgctcaagtccatcatgaaggccatggtgcct
ctcctacagattggccttctgctcttctttgccatcctgatgtttgccatcattggcttg
gaattctacagtgggaagttacaccgagcatgcttcatgaacaattcaggtattctagaa
ggatttgaccccccacatccatgtggtgtgcagggctgcccagctggttatgaatgcaag
gactggatcggccccaatgatggaatcacccagtttgataacatcctttttgctgtgctg
actgttttccagtgcatcaccatggaagggtggaccaccgtgctgtacaataccaatgat
gccttaggagccgcctggaattggctgtacttcatccctctcatcatcattggctctttc
tttgttctcaacctcgtcctgggtgtgctttccggagaatttgccaaagagagagaaaga
gtggagaaccggagagcattcatgaaactgcggcgtcagcaacagattgagcgtgagctg
aatggctaccgtgcctggatagacaaagcagaggaagtcatgcttgcagaagaaaataaa
aatgccggaacatcagccttagaagtgcttcgaagggcaaccatcaaaaggagccggacg
gaggccatgacccgagactccagcgatgagcactgcgctgatatctcttctgtgggcaca
cctcttgccagagccagtatcaagagtacgaaggttgatggggcctcctatttccggcac
aaagaaagacttctgcgcatctctattcgccacatggtcaaatcccaggtgttttattgg
attgtcttgagcctcgtggctctgaacactgcctgtgtggccatcgtccatcacaaccag
ccccagtggctcactcacctcctctactatgcagaatttttgtttctggggctcttcctc
ttggagatgtccctgaagatgtacggcatggggcctcgcctttattttcattcttcattc
aactgctttgattttggggtcacagtgggaagcatctttgaggtggtctgggcaatcttc
agaccgggtacatcttttggaatcagtgtcttgcgtgctctccgacttctaaggatattt
aaaataaccaagtattgggcatccctccggaacttagtagtctccttgatgagctccatg
aagtctatcatcagtttgctcttcctcctcttcctcttcattgttgtcttcgctctccta
gggatgcagttgtttggaggcaggtttaactttaatgatggaactccttcagcaaatttt
gatactttccctgctgccatcatgactgtgttccagatcctgacaggagaggactggaat
gaagtgatgtacaatgggatccgctctcagggtggggtcagctcagggatgtggtccgcc
atctacttcattgtgctcactttgtttggaaactacacactactaaatgtgttcttggcc
attgctgtggacaatttagccaatgcccaggagctaaccaaggatgagcaggaggaagag
gaggccttcaaccagaaacacgcactgcagaaggccaaggaggtcagcccgatgtctgca
cccaacatgccttctatggaaagagacagaaggagaagacaccacatgtcgatgtgggag
ccgcgcagcagccacctgagggagcggaggcgtcggcaccacatgtcggtgtgggaacag
cgcaccagccagctgaggaggcacatgcagatgtccagccaggaggccctcaacaaagag
gaggccccacccatgaaccctctcaatcctctcaaccccctgagtcccctcaacccactc
aatgcccaccccagtctctaccggaggtccaggcccattgaaggtctgaccttaggcctg
ggcctagaaaagtgtgaagaggagcgcatcagccgtgggggttccctcaagggagatgga
ggcgacctgaccagtgccctggacaatcagaggagccccttatccttgggcaaacgggag
ccaccatggctctccaggccttgtcatgggaattgtgacccaagccagcaggaggctggg
ggaggagagactgtggtaaccttcgaggacagggccaggcacaggcagagccagcggcga
agccggcatcgtcgagtcaggactgaagggaaggagtcctcctcagcctcacggagcagg
tctgccagccaggagcggagtctggatgaagtggtatctactgagggagagaaggaacat
gagtcccggggcagccatgggggcaaggaaccgacaatccatgaagaggaaagaacccag
gacttaaggaggaccaacagtctgatggttcccagaggctctgggctagcagaagccctt
gatgaagccaatacacctctagtcatgcctcagcctgagctggaggtagcaaaggatgca
gtgttgactgagcaggaaccagaaggcagtagtgagcaagcgctgctggggaatgtgcag
ctggatgtaggccggggaatcagccagagtgagcctgacctatcctgcatcacggccaac
acggacaaggcagccaccgagagcaccagtgtcaccgtggccatccctgacgtggggccc
ttagtggattcgacggtggtgcacattagtaacaaaactgatggggaggccagtcctttg
aaggaggcagaggtcaaagaggaagaagaggaagaagtagagaagaagaagaagaaaaag
gagaggcgtgagacaggcaaagccatggtgccacacagctccatgttcatcttcagcacc
acgaatccgattcgcagggcctgccactacattgtgaacctgcgctactttgagatgtgt
atccttctggtgattgcagccagcagcattgccctggcagctgaggaccctgttctgacc
aactctgagcgcaacaaagtcctgaggtattttgactacgttttcacaggcgtgttcacc
tttgagatggttataaagatgatagaccagggcttgattctgcaggatggatcctacttt
cgagacctctggaacatcttggactttgtggtggtggttggtgcattggtggcctttgct
ctggcgaacgctttgggaaccaacaaggggagagacatcaagaccatcaagtctctgagg
gtgctcagagtgttgaggcccctgaaaaccatcaagcgcttgcccaaactcaaggctgta
ttcgactgtgtggtgacttctttgaagaatgtcttcaatatactcattgtctacaagctc
ttcatgttcatctttgctgtcatcgcagttcagcttttcaagggaaagttcttttactgc
acagacagctccaaggacacagagaaggaatgcataggcaactatgtagaccatgagaaa
aacaagatggaggtgaagggccgagaatggaagcgccatgaattccattatgacaacatc
atctgggctctgctcaccctctttacagtctctacaggagaaggatggcctcaggttctg
cagcattctgtagatgtgacagaagaagaccggggtccaagccgcagcaaccgcatggag
atgtctatcttttatgtggtctactttgtggtcttccctttcttctttgtcaatatcttc
gtggctctcatcatcatcactttccaggaacaaggggataagatgatggaggagtgcagc
ctggagaagaatgagcgggcgtgcattgactttgccatcagtgccaaacctctcacacgc
tacatgccacagaacaggcacactttccagtaccgcgtgtggcacttcgtggtttctcca
tcctttgagtacaccatcatggccatgatcgctttgaacactgtcgtgctgatgatgaag
tattattctgctccatgtacctatgaactggcactgaagtacctgaatattgcctttacc
atggtgttttccctggaatgtgtcctaaaggtcatcgcatttggcttcttgaactacttc
cgagatacgtggaatatctttgatttcatcacagtgattggcagtatcacagaaattatc
ctgacagacagcaagctggtgaacaccagtggcttcaatatgagctttctgaagctcttc
cgagctgcccgcctcataaagcttctgcgtcagggctacaccattcgtattttactttgg
acctttgtacagtccttcaaggccctcccctatgtctgccttctgattgccatgctcttc
ttcatttatgccatcattggaatgcaggtatttggaaacatcaaattagatgaggagagt
cacatcaaccggcacaacaatttccggagtttctttgggtccctcatgctactcttcagg
agtgctacaggtgaggcctggcaagagattatgctgtcatgccttggggagaaaggctgt
gagcctgacaccacagcaccttcggggcaaaatgagaatgagcgctgcggcaccgatctg
gcctatgtttactttgtctccttcatcttcttctgttccttcctgatgctcaacctgttt
gtggccgtcatcatggacaactttgagtacttgactcgagattcctccatcctggggcct
caccacttggatgaatttgtccgagtatgggcagaatatgatagagcagcatgtggccgc
atccattacactgagatgtatgaaatgctgactctcatgtcaccaccgctaggcctcggc
aagagatgtccctccaaagtggcatataagaggttggtcctgatgaatatgcctgtagct
gaggacatgactgtccattttacttctacacttatggccctgatccggacagctttggac
attaagattgccaaaggtggtgcagacaggcagcagctagactcagagctacaaaaggag
accctggctatctggcctcacctgtcccagaagatgttggatctactggtgcccatgccc
aaagcctctgacctgactgtgggcaaaatctatgcagctatgatgatcatggactactat
aagcaaagtaaggtgaagaagcagaggcagcagctggaagaacagaaaaatgcgcccatg
ttccagcgtatggaaccctcatcactaccccaggagatcattgctaatgctaaatctctg
ccttatctgcagcaggatgctgtttcaggcttgagtggccggagtggatacccttcaatg
agtccactctccccccaagaaatattccagttggcttgtatggacccagccgatgatgga
caattccaggaacaacaatcactggagccagaggttagtgaattaaaaagcatgcagtcc
tctaaccatggcatctaccttccttcggacacccaggagcatgcgggatctgggagggcg
tcctctatgccacgtctgactatggatccccaggtggtgacagaccctagctccatgaga
cgttcattttccaccattcgggataaacgttcaaattcttcctggttggaggaattctcc
atggagcgaagtagtgaaaatacctacaaatcacgccgccggagttaccactcttccctg
aggctgtcagcccatcgcttgaactctgactcaggccacaagtctgacacccaccgctca
gggggcagggagcgaggacgatcaaaagaacgaaagcatcttctatctcctgatgtgtcc
cgctgcaattctgaagagcgagggaaccagggtgactgggagtccccagagcgcaggcag
tccaggtcacccagtgagggcaggtcacaaacccccaacagacagggcacaggttccctg
agcgaaagctccatcccctctatctctgacaccagcaccccaagacgaagtcgtcggcag
ctcccaccagtcccaccaaagcctcggcccctcctctcctatagctctctgatgcgtcat
gctggcagcatctctccaccagctgatggaagtgagggcggatcgcccctgacctctcaa
gtcctagagagcaacaacgctcgtctgacggagtcttccaactctccacactcccagcag
ggccagcactcttcccctcaacactacatctccgagccctacctggccctgcacgaagac
tcccatgcctcagactgtggcgaggaggagacactcacctttgaagcagcggtggctacg
agcctgggccgttccaacaccatcggctcagccccgcccctgcggcacagctggcagatg
cccaatgggcactatcggcgacggaggcgtggggggcctgggcccggcatgatgtgtgga
gctgtcagtgacctcctgagtgacacggaagaagatgacaaatgctag
DBGET
integrated database retrieval system
