Perognathus longimembris pacificus (Pacific pocket mouse): 125363040
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Entry
125363040 CDS
T08928
Symbol
Catsperb
Name
(RefSeq) LOW QUALITY PROTEIN: cation channel sperm-associated auxiliary subunit beta
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125363040 (Catsperb)
04040 Ion channels [BR:
plop04040
]
125363040 (Catsperb)
Cilium and associated proteins [BR:
plop03037
]
Motile cilia and associated proteins
Sperm associated proteins
125363040 (Catsperb)
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
125363040 (Catsperb)
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Gene cluster
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
125363040
NCBI-ProteinID:
XP_048217972
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Position
14:complement(53783568..53851912)
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AA seq
1121 aa
AA seq
DB search
MDSQLKYVIILFLNMLEYSSGIVYNKGNMKKSFACSSETYPKDNEIIKLFLSLDNLVINC
FFQTGDERTSKGLLSVFTSGGLAPSLEILNSTYQGIFHFNLTLFSDRIFWLIDIPRENIT
RNTDIAATEEWLVRISLHQGLNIYTTEGTLLDRVREPILQWTLGTVMTLDQVKELYPHVL
DIKVAKCPCANDVALITFVLNSTYNGVYVGVTFSGFWYYEDITWYNMTEIIYSKLQEEHS
KLTAIDMVLTNHYLVILTSLGLYVSKDLRQPTTKLIQLTRADFCGFERVDYIKGKLWYSE
RCFANREKFEVDYVTITFDRNRTLSEASACFFSEEPFLAWTPCISYNSRSVRSFPRVVTF
LVDPEQNTGIYLFHDLTTKRTMVTVNVLKNNQPSLQVKFPPFRFPALFTNPQGMVFHPRS
HFLYVYGNQVWLSLDGGNNFELLCDFYNTIIKSTSHSFYTSDIVLVSKNGRIYLTKAGMQ
IYTGIGKFDDPVFVIYYDHLGFIHKLTPDHFETGEKVGALGSSTSIFQSAPDLGFETALA
PQYISRNEMAFFAYVPLNQPQDVIRRKRFRNFHFSKLIHSGKAGIAYVKQVLHHEEPVGF
LSSVLTEVLEPFAVEEANESSCLYSSLSFEETSTSSYKLVLDPQNPNASFQAMDIEKTVV
IPGYSSFLILEIIDTKNALAFATMPRSVPKNITFLTGQWFLHDFGEKNGRKWKIFVRPCN
YLLQQLDEGQSINSVKYIDVGNTQKISVKVIPKTKGTRTLTIPLIRVVIGNPNLLDVTVN
GSFDSTDSYSMDISVTSRSLRQGSTSLALLMWGASTMCFVTTLVPTLKSSCSYLRSMRHV
PSTVIPPEDWISGEHPDSQGFNMIKTLPVNYRPPSNMGIAIPLTDNFYHADPSKPIPRNL
FRKSQITGKYKQCAFASNREDCNCTNDQKLSYSVAFSDCKEKVPRFKFPVTQYQVSLEIF
SEYGIIPVKPSYLVTVTEVNTRRNWELKHTIPESIKKMKNYLEPVLQASVYNPLGLNLSI
KGSELFHFRVSVVPGVTFCNLVEEFQIYVDEVPLPFPGHTLIAVATAVGLGGLIFMVFMF
QLRNIHPGKALKKWIQRNKVNVSNTSVTXLTHKQNIVHLSR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaacttaaatatgtcataattttatttttgaatatgcttgaatattcatca
ggaatagtatataataaaggtaatatgaagaaaagctttgcttgttccagtgaaacctac
cccaaagacaatgaaataatcaagctgtttctttccttggacaacttggtaattaactgt
tttttccaaactggagatgaacgtacttcaaagggattgctgagtgtgttcacatctgga
ggacttgctcccagcctggaaatcctaaatagtacttaccagggcatcttccacttcaat
ttgactttgttcagtgaccggattttctggttaattgatattcctagagaaaacatcaca
agaaacacagatattgcagctacagaagaatggctagttaggatctctttacatcaagga
ttaaatatttatactactgaaggaactctgttggacagagttcgagaacctattcttcag
tggactcttggaactgtaatgaccctagaccaggtcaaggaattatatccacatgtacta
gatatcaaagtggcaaagtgcccctgtgccaatgatgtagcattaatcacctttgttttg
aattccacatataatggtgtttatgtcggcgtcaccttctctggattctggtattacgag
gatattacgtggtataatatgacagaaatcatctattcgaaacttcaggaagaacattca
aagcttacagcaatagacatggtcttaacaaatcattatttagttatcctcacctctttg
ggtctttatgtaagtaaagatctgcgccagccaaccaccaagctcatacagctcacaagg
gcagacttttgtggctttgaaagggttgactatatcaaaggaaagttgtggtatagtgaa
agatgttttgctaacagagaaaaatttgaagttgactatgttactatcacctttgacagg
aataggaccctaagtgaggcaagcgcttgcttttttagtgaagaaccattccttgcctgg
acaccttgcataagttataattccagaagtgtaagatcttttccaagggtggtaacattt
cttgttgacccagagcaaaatactggcatttacctcttccatgatttgactaccaaacgt
accatggttactgtgaatgttctaaagaataaccaaccaagtctccaagtcaaatttcct
cctttcaggtttcctgcactattcactaaccctcaagggatggtatttcatccccgaagc
cactttctatatgtatatggcaaccaggtatggctttcattggatggcggcaacaatttc
gagctcctctgtgatttttacaatactatcataaagagcacttcccatagcttttatact
tcagatattgttctagtttccaaaaacgggaggatttacttgaccaaggcaggaatgcaa
atatacactggaattggaaaatttgatgacccagttttcgtaatatattatgatcatttg
ggattcatacataaactaactccagaccactttgaaactggtgaaaaagttggagccttg
ggaagttctacaagtatttttcaatcggctcctgatttgggctttgagactgcgcttgct
ccacagtatatctctcgtaatgagatggctttctttgcatacgtacctctgaatcaacct
caggacgtaatacgcaggaagaggtttcgaaattttcacttttcaaaactgatacattct
ggtaaagctggaatcgcttatgtgaagcaggtcctgcaccatgaagagcctgtaggattt
ttatcctcagtccttactgaagtgctagaacccttcgcagtagaagaagcaaatgagagc
tcttgtttgtatagctctctttcctttgaggagactagtacttcctcctataaacttgtt
cttgacccacaaaaccccaatgcctcatttcaagctatggatatagagaagacagtggtc
attcctggctacagcagtttcctgatcctagagattatagatacgaagaatgctttggct
tttgctactatgcctaggagtgtgcccaaaaatattacttttctaactggccagtggttc
ttacatgactttggagaaaagaatggacgaaaatggaaaatatttgtgagaccctgtaat
tatttgctacagcaacttgatgagggtcagtccatcaactctgtgaaatacattgacgtg
ggaaacactcagaagatctctgttaaggtcatacccaaaacaaaaggtactcggacactt
actatcccattgattagagtagtaattggaaacccaaatttgttggatgttacagtaaat
ggctcttttgacagtactgatagttattcaatggacatttctgtgactagcagaagttta
cgtcaaggttccacttcactggctttgcttatgtggggagcctcgaccatgtgcttcgtg
accacgctggtgcccacactcaaaagcagctgcagttacctgaggtctatgcgccatgtg
cccagcacagtcatcccgcctgaggactggattagtggagagcacccagacagtcagggg
ttcaacatgatcaaaacactgccagtaaattacaggcctccatccaatatgggaattgct
attccactcacagacaatttttatcatgcagatcctagcaaacccatacctagaaatctg
ttccgcaagtcacagataactgggaaatacaaacagtgtgctttcgcctccaaccgggag
gactgtaattgcacaaatgaccagaagctttcatactctgtggctttctccgattgcaaa
gaaaaagttccacgttttaagtttccggtcacacaatatcaagtttccttggaaattttc
agcgagtacggaattatcccggtgaaaccttcatacctggtcacggtgaccgaagtgaac
acgaggaggaactgggaactaaaacacactatacctgaaagtattaaaaaaatgaaaaac
tatttagaaccagttcttcaagcttcagtatataatcctttaggtctcaacctaagtata
aagggttctgagctgtttcactttagagtgtctgttgttcctggggtcactttctgtaac
ttagttgaagaatttcagatctatgttgacgaggtgccattgccatttccgggacatacc
cttattgctgtggcaacggctgtcggacttgggggattaatttttatggtatttatgttc
cagctgcgtaacatccacccagggaaggcacttaaaaagtggattcaaagaaacaaagtg
aatgtgtcaaataccagtgtcacatagctgactcataaacaaaacatagtgcatttgtcc
agatga
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