Perognathus longimembris pacificus (Pacific pocket mouse): 125363784
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Entry
125363784 CDS
T08928
Symbol
Trappc8
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125363784 (Trappc8)
Membrane trafficking [BR:
plop04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125363784 (Trappc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
125363784
NCBI-ProteinID:
XP_048219000
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All DBs
Position
15:complement(27484148..27566103)
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AA seq
1433 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSELHMRDPNN
QLHIIKNLKIAVSNIITQPPQPGAIRKLLNDVVSGSQPAEGLVANVITAGDYDLNISATT
PWFESYRETFLQSMPASDHEFLNHYLACMLVASSNEADPMEQFSKLSQEQHRIQHNNDYS
YPKWFIPNTLKYYVLLHDVSAGDEQRAESIYEEMKQKYGTQGCYLLKINSRTSNRASDEQ
IPDPWSQYLQKNSIQNQESYEDGPCTITSDKSSDSNLLSLDGLDNEVKDGLPNNFRAHPL
QLDQSSDPSNSMDGPDHVKSVSALHETKKANTGVIHGACLTLTDHDRIRQFIQEFTFRGL
LPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAPE
LQIRKMADLCFLVQHYDLAYNCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPY
PAHYMDTAIQTYRDICKNMILAERCVLLSAEILKSQSKYSEAAALLIRLTSEDSDLRSAL
LLEQAAHCFINMKSPMVXKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAE
DHINFTIGRQSYTLRHLENAVSAFRHILINESKQSATQQGAFLREYLYVYKNVSQLSPDG
PLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDSESSQQWRELEEHVVAV
VNKGIIPSNFHPTQYCLNSYSDNSRFPLAVVEEPITVEVAFRNPLKVPLLLTDLSLVWKF
QPEDISGKDNEEVKELVSSQSEMIGTEVISEFLINSEESKVARLKLFPHHIGELHILGVV
YNLGTIQGSMTVDGIGALPGCHTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKTSIKYGPD
RRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTF
GGNTAVLTPLSPSASENCSAYKTVVTDSTSVCTALISSASSVDFGIGIGSQPEVIPVPLP
DTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKIQHRILRHTAVICTSRSLN
VRATVCRSNSLEGEEGRGGNMLVFVDVENTNTSEAGVKEFHIAQVSSSSQHWSLQKSVNL
SENKDAKLASREKGKFCFKAVRCKEAATQSAEKYTFADIIFGNEQIISSTSPCADFFFRS
LSSELKKSQTQQSVNTGKHSVEEAVRLIQKCSEVDLNIVILWKAYVVEDSKQLILEGQHH
VILHTIGKEAFSYRQKQEPPEMELLKFFRPENSTVSSRPSVDQLSNIIKTSLHYPESFNH
PFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTTSPEALETHGSFTWLGQTQYKLQLKS
QEIHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQNSMPALIIINNV
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtacagtcagtgcaggagctcatcccggactccttcgtcccctgtgtg
gccgcgctgtgcagcgacgaagccgagcggctcactcgtctcaatcatctgagcttcgcg
gagctgctgaagcctttctctcgcctcacttccgagcttcatatgagagatcctaataat
caactccacataatcaaaaatttgaagatagccgtaagcaacattatcacccaaccacct
cagcctggagctattcgaaagcttttgaatgatgttgtttctggcagccagcctgcagaa
ggattagtagctaatgtgattacggcaggagattatgaccttaacatcagtgctactact
ccatggtttgagtcttacagagagaccttccttcagtccatgccagcatcggatcatgaa
ttcctgaaccattatttagcatgtatgttggtagcatcatccaatgaagctgaccctatg
gaacagttttccaagttgtcacaagaacagcatcggattcagcacaacaatgattattcc
taccctaagtggtttataccaaatacacttaaatattatgtacttttacatgatgtaagt
gcaggagatgaacagagagctgaatcaatttatgaagaaatgaaacagaaatacggaact
cagggttgctatttacttaaaattaattctcgaacatcaaatcgagcatcagatgaacag
ataccagatccgtggagtcagtatcttcagaaaaatagtattcaaaatcaggaatcatat
gaagatggcccttgtactataacatcagataagagttctgatagtaacttgctttcattg
gatggattagataatgaagtcaaagatggcttaccaaataactttagagcccacccactt
caattggatcaatccagtgacccttctaatagcatggatggcccagatcatgtcaaatct
gtttcagcattacatgaaacaaagaaagcaaatactggagtaattcatggtgcatgttta
acgcttactgatcatgatagaatccgacagtttatacaagagtttacatttcgtggcctt
ttgcctcatatagagaaaaccattcggcaattaaatgatcagctaatatcaagaaaagga
ttgagtcgatctctgttttctgcaactaaaaaatggtttagtggaagtaaagttccagaa
aagagcattaatgagctgaaaaatacatctgggttgctatatccaccagaagcaccagag
cttcagatcaggaaaatggctgacttgtgctttttggtgcaacattatgatttggcttat
aattgttatcacactgcaaagaaggattttcttaatgatcaagcaatgctttatgcagct
ggtgccttggaaatggcagcagtgtcagcttttcttcaaccaggagcacctcgaccatac
ccagctcattacatggatacagcaattcagacatacagagatatctgcaagaatatgata
ttggctgaaagatgtgtgttacttagtgctgaaattttaaaaagccagagcaaatattca
gaagctgcagctctcctaatacggttgacaagtgaggattctgatcttcgaagtgcactt
cttttggaacaggcagcacattgctttataaacatgaagagtcctatggttnagaaatat
gcatttcatatgatactggcaggccaccggtttagtaaagcaggacagaaaaaacatgct
ttacgctgctattgtcaagccatgcaagtttacaaaggaaaaggctggtctcttgcagag
gatcacattaacttcacaattggacgtcagtcctatactcttagacacttggagaatgct
gtatctgcttttaggcacattctaatcaatgaaagtaagcaatcagctacccaacaagga
gccttcctcagagaatatctttatgtttacaagaatgttagtcagctctcaccagatggc
cctttaccacagcttcctttaccatatattaacagttcagcaacacgggttttctttggc
catgacagacgaccagcagatggagaaaagcaagcagctactcatgtaagtcttgatcaa
gaatatgactctgaatcctctcagcagtggcgagaacttgaggaacatgttgtggctgtg
gttaacaaaggaataattccatctaattttcatccaacacaatactgtttgaacagttat
tcagataattccagatttccacttgcagttgtggaagaaccaattacagtagaagtggct
tttagaaaccctttgaaagttccacttttattgactgacttgtcgttggtctggaagttt
cagcctgaggatatcagtggaaaagataatgaagaagttaaagaactagtttcaagtcaa
tctgaaatgattggaactgaagttatttcagaattcttaattaatagtgaagaatctaaa
gtggcaagattaaagctctttccccatcacataggagagctgcatattttgggagttgtt
tataatcttggcactattcagggctccatgacagtagacggcattggtgctctccctgga
tgtcacacagggaaacattccttgagtatgtcagtccgagggagacaggatttagaaatt
cagggtcctcgacttaacaacacaaaggaagagaaaacatctattaaatatggtcctgat
cgacgtttagatcctattatcactgaggaaatgccactattggaggtattttttatacat
tttcctacagggctcctctgtggagaaatccgaaaagcctatgtggaatttgttaatgtc
agcaaatgtcctctcactggattgaaagttgtttctaagcgtccagagttctttactttt
ggtggtaatactgctgttctaacaccactgagcccctctgcctctgaaaactgtagtgca
tacaagactgttgtgacagattctacctctgtgtgtacagccctcatttcatcagcttct
tctgtagactttggtattggcataggaagtcagccagaagtgattcctgtaccccttcct
gacactgttcttttacctggagcttcagtccaactaccaatgtggttacgtgggccagat
gaagaaggtgtccatgaaattaactttttgttctactatgaaagtgttaaaaagcaacct
aaaatacaacacagaatattaagacacactgcagttatttgtaccagtcgatctttgaat
gttagagccactgtctgccgaagtaattcacttgaaggtgaagaaggaagaggaggcaat
atgctagtctttgtagatgtggaaaataccaatactagtgaagcgggtgttaaggagttc
catatagctcaagtatcaagtagtagccaacactggagcctacagaaatctgtaaatctc
tctgagaacaaagatgccaaacttgccagtagggaaaagggaaagttttgcttcaaggca
gtaagatgtaaagaagctgctacacaatccgcagaaaaatacacctttgcagatatcatc
tttggaaatgagcagataataagttcaacaagcccatgtgcagatttcttttttcgaagt
ttgtcctctgagttaaaaaaatcacagactcaacagtctgtgaatacaggcaaacattca
gtagaagaggctgtgagattgattcaaaagtgcagtgaagtagatttgaatattgtcata
ttatggaaggcatatgttgtagaagacagtaaacagcttattttggaaggtcagcatcat
gttattcttcatactataggaaaagaagccttttcatatcgtcagaaacaggagccacca
gaaatggaactattaaagtttttcaggccagaaaattctacagtttcctcaaggccatca
gtggaccagctttctaatatcattaaaacaagtcttcactacccagaatcatttaatcat
ccatttcaccaaaaaagcctttgtttagtaccagtcacccttttactttctaactgttcg
aaggctgacgtagatgtgatagttgatcttcggcataaaacaacaagtccagaagcattg
gaaacccatggatcattcacatggcttggacagacacaatataaacttcagcttaaaagc
caggagattcacagtttgcagctgaaagcatgctttgttcatacaggtgtttataacctt
ggaactcctagggtgtttgccaagttatcagaccaagttacagtgtttgaaacaagtcag
cagaactccatgcctgccttgatcatcatcaataatgtgtga
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