Perognathus longimembris pacificus (Pacific pocket mouse): 125363843
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Entry
125363843 CDS
T08928
Symbol
Rbbp8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X1
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125363843 (Rbbp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125363843 (Rbbp8)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
125363843 (Rbbp8)
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Gene cluster
GFIT
Motif
Pfam:
CtIP_N
SAE2
Motif
Other DBs
NCBI-GeneID:
125363843
NCBI-ProteinID:
XP_048219100
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All DBs
Position
15:19852069..19937196
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AA seq
890 aa
AA seq
DB search
MNVSGSNCGSPNSTDVSSDFKELWTKLKEYHDKEVQGLQVKVTKLKKERVLDAQRLEEFF
TKNQQLREQQKVLHETIKVLEDRLRAGLCDRCAVTEEHMRKKQQEFENIRQQNLKLITEL
MNEKNTLQDENKKLSEQLQQKIENDQQLQAAELDGEENIIPDSPITAFSFSGINRLRRKE
NLHVRYVEETHTKLEHSGTNDLRKVCKASTHSQHNSKENEILAADSCEQSHSPLAKTRGM
NNFNLATVVAETLGLSVGEESEPQGPMSPLGDEFYHCQEEDHKKQTFEECMRNSKNSSRF
SDSTSKTPPKEELSTRVSSPVFGATSNLKSNLGLNTSLSPSLLETVKNTLKTPSFSNISI
SRQEKVRSKSEDNTLSTHHSLGSDMNKIISQSSSNKQILKNISESVDEQDNTEHIKEAIT
DKYVISLKSLGSRTSKRKKTEEENEHEINCPQASFDKENAYPFPVDSQFSMNGDHMMDKP
LDLSDRCSAIQRQEKSQGSEISKNKFKQVTIYEALKPISKGSSSSRRTLSGSCVLPRDSP
EELCLQECIIQSLSKSSLDHKIPLQIKEENPVFKIPLCPRESLETENLFNDMKDAGSHES
RVKTRSVRGGCELASVLQLNPCRRAKTTTLQNNQDVSFENIQWSVDPGVDLSQYEMDITV
IDITLIDIKDGSQSRLGAETVDMDCTLVSDTMLLKSKKQEQKEEKSPNGERKMNDSLDDM
FDRTTHEEYESCLTDSCPQVANEEKESVAASKKPSTHGDKQEKVKQKAFVEPYFKDNERE
TSLQNFPHIEVVRKKEERRKLLGHTCKECEIYYADMPEEEREKKLASCSRHRFRYIPPNT
PENFWEVGFPSTQTCIERGYIKEDLDLCPRPKRRQPYNAMFSPKGKEQKT
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtctctggaagcaattgtggaagccctaattctacagatgtatctagtgacttc
aaggaactctggacaaaactaaaggagtatcatgataaagaagtacaaggtttacaagta
aaagtaaccaaactgaaaaaggaaagagttttagatgcacaaagactagaagaattcttc
accaaaaatcaacagctgagagagcaacagaaggttcttcatgaaacaattaaagttttg
gaagatcgattaagagcaggactgtgtgaccgctgtgcagtaactgaagaacatatgcgg
aaaaagcaacaagaatttgaaaatatccggcagcagaatcttaaacttattacagaactc
atgaatgaaaagaacactcttcaggatgaaaataaaaagctttctgaacaactgcaacaa
aaaattgagaatgatcagcagcttcaagcagctgagcttgatggtgaagaaaatattatt
ccggattcgccaataacagccttttcgttttctggcattaatcggctacgaagaaaggag
aatctccatgttcgatatgtagaagaaacacatactaaattggagcactctggtacaaat
gatttaagaaaagtttgtaaggcctcaactcattcacaacataactctaaagaaaatgaa
attctagcagctgacagttgtgaacaaagtcattctccactggctaaaactcgaggaatg
aacaattttaatttagctacagttgttgctgaaacacttgggcttagtgttggagaagag
tctgaaccacaaggtcctatgagccctcttggtgatgagttctaccactgtcaggaagaa
gatcacaagaaacagacgtttgaggaatgcatgaggaatagtaaaaatagttcaagattt
tcagattctacttcaaagactcctcctaaagaagaattgagtactcgggtatcatctcct
gtttttggagctacctctaatttgaaaagtaatttgggcttgaatacaagtttgtcccct
tctcttttagagactgtgaaaaataccctaaaaacaccctcctttagcaacatttctatt
tctagacaagagaaagttagatcaaaatctgaagataataccctttccacacatcatagt
cttggatctgacatgaacaagatcattagccagtcatcgtctaataaacaaatactgaaa
aatattagtgaatccgtagatgagcaggataacactgagcacattaaagaagctattact
gataaatatgtgatatctctgaaatcattgggaagtagaacatctaaaaggaagaagact
gaggaagaaaatgaacatgagataaactgtccccaagcctcttttgataaagaaaatgcg
tatccttttccagtggatagtcagttttccatgaatggggaccacatgatggataaacct
ctggatctatctgatcgatgttcagctattcagcgtcaagagaaaagccaaggaagtgaa
atttctaaaaacaaatttaagcaagtgactatttatgaagctttgaagcccatttcaaag
ggctcttcctcgagccgtaggaccttgagtggaagctgtgtgttacccagagattcccca
gaagagctctgtttacaggagtgtattatccagtctttgagtaaatcctctctggaccat
aaaataccattacaaataaaagaagaaaatcctgtcttcaaaatccctctgtgtccacgt
gaaagtttggagacagagaatctttttaatgacatgaaggatgctggttctcatgagtca
agagtgaaaaccaggtcagtccgtggaggatgtgaacttgcatcagttctacagctaaat
ccctgtagacgtgctaaaacgaccactttgcaaaacaaccaagatgtgtccttcgaaaat
atccaatggagtgtagaccctggagtggacctttctcagtatgaaatggatattactgta
atagatattactttaatagatataaaagatggcagtcagtcaagattaggagcagagaca
gtagatatggactgtacgttagtgagtgacaccatgcttttgaaatcgaagaagcaagag
caaaaagaagaaaaaagtccaaatggagaaagaaaaatgaatgatagcttggatgatatg
ttcgataggaccacacacgaagagtatgaatcctgtttgacagatagctgcccccaggta
gcaaacgaagagaaggaatcagtggctgcctccaagaaaccaagcacacatggtgataaa
caagaaaaggtcaaacagaaagcatttgtggagccatattttaaagacaatgaaagagaa
actagcttgcaaaatttccctcatattgaggttgttcggaaaaaagaagagagaagaaaa
ttgcttgggcatacatgtaaggaatgtgaaatttattatgcagatatgcctgaagaagaa
agagaaaagaaattggcttcctgctcaagacatcgatttcgttacattccacccaacaca
ccagagaatttctgggaagttggttttccttccactcagacttgcatagaaagaggttac
attaaggaagatcttgatctttgccctcgtccaaaaagacggcagccttacaacgcaatg
ttttctccaaaaggcaaggagcagaagacctag
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