KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125368400
Entry
125368400         CDS       T08928                                 
Symbol
Sin3a
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04350  TGF-beta signaling pathway
plop04919  Thyroid hormone signaling pathway
plop05016  Huntington disease
plop05169  Epstein-Barr virus infection
plop05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    125368400 (Sin3a)
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    125368400 (Sin3a)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    125368400 (Sin3a)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    125368400 (Sin3a)
  09164 Neurodegenerative disease
   05016 Huntington disease
    125368400 (Sin3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plop03036]
    125368400 (Sin3a)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     125368400 (Sin3a)
    REST complex
     125368400 (Sin3a)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125368400 (Sin3a)
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress
Other DBs
NCBI-GeneID: 125368400
NCBI-ProteinID: XP_048225314
LinkDB
Position
20:complement(44686263..44725634)
AA seq 1274 aa
MKRRLDDQESPVYAAQQRRIPGGSEAFPHQHRVLAPAPPVYEAVSEAMQSAAGIQYSVTP
SYQVSAVPQSSGSHGPAVAAVHSGHHHPAAVQPHGSQGVPGHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPPPPPQHPSQASAQAAPAPAQ
PSPQPPATKVSKPSQLQAHPPASQQTPPLPPYASPRSPPVQPHTPVTISLGSAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGGYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLLSLKDSSMVDASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLESYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENANVPAGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLXDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTGAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGVKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENNNGATGGQLGTQSARSLLESAYQRKAEQLMSEENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKPAESVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETTKWLMGEGLEGLVPCTTTCDSETLHFVSV
NKYRVKYGPAPKAP
NT seq 3825 nt   +upstreamnt  +downstreamnt
atgaagcggcggttggatgaccaggagtcaccggtgtatgcggcccagcagcggcggatc
cctggcggctcggaggcgtttcctcaccagcaccgggtgctggcccccgcccctccggtc
tatgaagcggtctctgaggccatgcagtcggccgcagggatccagtactcggtcacaccc
agctaccaggtctccgcggtgccccagagctccggcagccacgggcctgccgtcgcggcc
gtccacagcggccaccaccaccccgctgccgtgcagccccacggaagccagggggtgccg
ggccacgcgcaccccgccccgcccgtggcgcccgtgcagggacagcagcagtttcagagg
cttaaggtggaggacgcgctgtcctatctcgaccaggtgaagctgcagttcggaagtcag
ccacaggtgtacaatgacttccttgacatcatgaaggagtttaaatcgcagagcatcgac
actccgggcgtgatcagtcgcgtgtcacagctgttcaaaggccatcctgacctgatcatg
ggcttcaacaccttcctgcctcctggctataaaatcgaggtgcagaccaacgacatggtg
aacgtgacaactcccgggcaggtgcaccagatccccacccacggcctgcagccccagccc
ccgccgccgccccagcacccctcccaggcttccgcacaggccgccccggccccggcccag
ccgagccctcagcccccggccaccaaggtcagcaagccttcccaactccaagctcatcct
ccagccagccagcagacgcccccactgccgccgtacgcctccccccgctccccgcccgtc
cagccccacacaccagtgacaatctccctgggctcggcgccatccttgcagaacaatcag
cctgtggagtttaatcacgccatcaactatgtcaataagattaagaaccgattccagggc
cagccagacatctacaaagccttcctggagattctgcacacgtaccagaaggagcagcgg
aacgccaaggaggcgggcgggggctacacgccagccctgaccgagcaggaggtctacgcc
caggtggcccggctcttcaagaaccaggaagacctgctgtccgagttcggacagttcctt
cccgacgccaacagctcggtgcttctgagcaaaaccacggctgagaaggtggactcggtg
aggaacgaccacgggggcaccgtgaagaagccccagctgaacaacaagccccagaggccc
agccagaacggctgccagattcgcaggcactccgggacgggcgccacccctcccgtgaag
aagaaacccaaactcctcagtctgaaggattcctccatggtggacgccagcaagcacggg
gttggaacagagtcgttgttttttgataaggtccgaaaagctctgcgcagcgccgaggcc
tacgagaacttcctgcgctgcctcgtcatcttcaaccaggaggtcatctcccgagctgaa
ctcgtgcagctggtctctccgttcctggggaaattccccgaattgtttaattggtttaaa
aacttcctgggctacaaggagtctgtccacctggagagctacccaaaggagcgcgccacc
gagggcatcgccatggagatcgactacgcgtcctgcaagcgcctgggctccagctaccgc
gccctgcccaagagctaccagcagcccaagtgcacgggccgcacgccgctctgcaaagag
gttttgaacgatacctgggtttccttcccctcctggtctgaggactccacctttgtcagc
tctaagaagacgcagtacgaggagcacatttaccggtgcgaagacgagcgctttgagctt
gacgtcgtcttagagaccaatctggcaacaatccgagttctggaagcaatacagaaaaag
ctctcgcgcctgtctgctgaggagcaagccaagttccgcctggataacaccctcgggggc
acgtcggaggtcatccaccgcaaagcgctgcagaggatatacgccgacaaggcggccgac
atcatcgacgggctgaggaagaacccctccatcgcggttccgattgttctgaaaaggttg
aagatgaaagaggaagagtggcgagaagcgcagcgaggctttaataaggtgtggcgagaa
caaaacgagaagtactacttgaagtctctagaccaccaaggcatcaacttcaagcagaat
gacacgaaggtcctgcggtccaagagcttgctcaacgagatcgagagcatatacgacgag
aggcaagagcaagccacagaagagaacgccaacgtccccgctgggccgcacctctccctc
gcctacgaggacaagcagatcctggaggacgctgccgcgctcatcatccatcacgtcaag
aggcagacagggatccaaaaggaggacaagtacaaaatcaagcaaatcatgcaccatttc
attccagatctgctgtttgctcagagaggtgatctcntcgacgtggaggaggaggaagag
gaagaaatggatgtagatgaagccacaggggcagccaagaagcacaacggtgtcgggggc
agtccccctaaatccaagctcctgttcagtaacacgggcgctcagaagctgcgagggatg
gacgaagtgtacaacctcttctatgtcaataacaactggtatatctttatgcggctgcac
cagatcctctgcttgcggctgctgcggatttgttcccaagcggaacggcaaattgaggag
gaaaaccgagagagagaatgggagcgggaagtgctgggcgtcaagcgggacaagagcgac
agccctgccatccagctgcggctcaaggagcccatggacgttgacgtggaggactactac
ccggccttcctggacatggtgcgcagcctgctggacggcaacatcgactcgtctcagtat
gaagactcgctgcgggagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgatccagagcatcgtcagacagctgcagcacatcgtcagcgatgagatctgcgtgcag
gtgacggacctttacctggcagagaacaacaacggggccacgggggggcagctgggcacg
cagagcgccaggagcctgctggagtcggcgtaccagcgcaaggcggagcagctcatgtcc
gaggagaactgcttcaagctcatgttcattcagagccaagggcaggtgcagctgaccatc
gagctgctggacacagaggaggagaactcggacgaccctgtggaggccgagcgctggtcg
gactacgtggagcgctacatgaactccgacaccacctcgcccgagctgcgcgagcacctg
gcgcagaaacccgtgtttctccccaggaacctgcggcggatccggaagtgccagcgcggg
cgggagcagcaggagaaggaggggaaggaggggaacagcaagaagccggccgagagcgtg
gacagcctggacaagctggagtgcaggttcaagctcaactcgtacaagatggtgtacgtc
atcaagtccgaggactacatgtaccgccgcacggcgctgctgcgcgcgcaccagtcccac
gagcgcgtgagcaagcgcctgcaccagcggttccaggcctgggtggacaagtggaccaag
gagcacgtgccgcgcgagatggcggccgagaccaccaagtggctgatgggcgaggggctg
gagggcctggtgccctgcaccaccacctgcgactcggagacgctgcacttcgtcagcgtc
aacaagtaccgcgtcaagtacggcccggcgcccaaggcgccctag

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