Perognathus longimembris pacificus (Pacific pocket mouse): 125368400
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Entry
125368400 CDS
T08928
Symbol
Sin3a
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04350
TGF-beta signaling pathway
plop04919
Thyroid hormone signaling pathway
plop05016
Huntington disease
plop05169
Epstein-Barr virus infection
plop05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125368400 (Sin3a)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125368400 (Sin3a)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
125368400 (Sin3a)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125368400 (Sin3a)
09164 Neurodegenerative disease
05016 Huntington disease
125368400 (Sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125368400 (Sin3a)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
125368400 (Sin3a)
REST complex
125368400 (Sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125368400 (Sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
125368400
NCBI-ProteinID:
XP_048225314
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All DBs
Position
20:complement(44686263..44725634)
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AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGGSEAFPHQHRVLAPAPPVYEAVSEAMQSAAGIQYSVTP
SYQVSAVPQSSGSHGPAVAAVHSGHHHPAAVQPHGSQGVPGHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPPPPPQHPSQASAQAAPAPAQ
PSPQPPATKVSKPSQLQAHPPASQQTPPLPPYASPRSPPVQPHTPVTISLGSAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGGYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLLSLKDSSMVDASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLESYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENANVPAGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLXDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTGAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGVKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENNNGATGGQLGTQSARSLLESAYQRKAEQLMSEENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKPAESVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETTKWLMGEGLEGLVPCTTTCDSETLHFVSV
NKYRVKYGPAPKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcggttggatgaccaggagtcaccggtgtatgcggcccagcagcggcggatc
cctggcggctcggaggcgtttcctcaccagcaccgggtgctggcccccgcccctccggtc
tatgaagcggtctctgaggccatgcagtcggccgcagggatccagtactcggtcacaccc
agctaccaggtctccgcggtgccccagagctccggcagccacgggcctgccgtcgcggcc
gtccacagcggccaccaccaccccgctgccgtgcagccccacggaagccagggggtgccg
ggccacgcgcaccccgccccgcccgtggcgcccgtgcagggacagcagcagtttcagagg
cttaaggtggaggacgcgctgtcctatctcgaccaggtgaagctgcagttcggaagtcag
ccacaggtgtacaatgacttccttgacatcatgaaggagtttaaatcgcagagcatcgac
actccgggcgtgatcagtcgcgtgtcacagctgttcaaaggccatcctgacctgatcatg
ggcttcaacaccttcctgcctcctggctataaaatcgaggtgcagaccaacgacatggtg
aacgtgacaactcccgggcaggtgcaccagatccccacccacggcctgcagccccagccc
ccgccgccgccccagcacccctcccaggcttccgcacaggccgccccggccccggcccag
ccgagccctcagcccccggccaccaaggtcagcaagccttcccaactccaagctcatcct
ccagccagccagcagacgcccccactgccgccgtacgcctccccccgctccccgcccgtc
cagccccacacaccagtgacaatctccctgggctcggcgccatccttgcagaacaatcag
cctgtggagtttaatcacgccatcaactatgtcaataagattaagaaccgattccagggc
cagccagacatctacaaagccttcctggagattctgcacacgtaccagaaggagcagcgg
aacgccaaggaggcgggcgggggctacacgccagccctgaccgagcaggaggtctacgcc
caggtggcccggctcttcaagaaccaggaagacctgctgtccgagttcggacagttcctt
cccgacgccaacagctcggtgcttctgagcaaaaccacggctgagaaggtggactcggtg
aggaacgaccacgggggcaccgtgaagaagccccagctgaacaacaagccccagaggccc
agccagaacggctgccagattcgcaggcactccgggacgggcgccacccctcccgtgaag
aagaaacccaaactcctcagtctgaaggattcctccatggtggacgccagcaagcacggg
gttggaacagagtcgttgttttttgataaggtccgaaaagctctgcgcagcgccgaggcc
tacgagaacttcctgcgctgcctcgtcatcttcaaccaggaggtcatctcccgagctgaa
ctcgtgcagctggtctctccgttcctggggaaattccccgaattgtttaattggtttaaa
aacttcctgggctacaaggagtctgtccacctggagagctacccaaaggagcgcgccacc
gagggcatcgccatggagatcgactacgcgtcctgcaagcgcctgggctccagctaccgc
gccctgcccaagagctaccagcagcccaagtgcacgggccgcacgccgctctgcaaagag
gttttgaacgatacctgggtttccttcccctcctggtctgaggactccacctttgtcagc
tctaagaagacgcagtacgaggagcacatttaccggtgcgaagacgagcgctttgagctt
gacgtcgtcttagagaccaatctggcaacaatccgagttctggaagcaatacagaaaaag
ctctcgcgcctgtctgctgaggagcaagccaagttccgcctggataacaccctcgggggc
acgtcggaggtcatccaccgcaaagcgctgcagaggatatacgccgacaaggcggccgac
atcatcgacgggctgaggaagaacccctccatcgcggttccgattgttctgaaaaggttg
aagatgaaagaggaagagtggcgagaagcgcagcgaggctttaataaggtgtggcgagaa
caaaacgagaagtactacttgaagtctctagaccaccaaggcatcaacttcaagcagaat
gacacgaaggtcctgcggtccaagagcttgctcaacgagatcgagagcatatacgacgag
aggcaagagcaagccacagaagagaacgccaacgtccccgctgggccgcacctctccctc
gcctacgaggacaagcagatcctggaggacgctgccgcgctcatcatccatcacgtcaag
aggcagacagggatccaaaaggaggacaagtacaaaatcaagcaaatcatgcaccatttc
attccagatctgctgtttgctcagagaggtgatctcntcgacgtggaggaggaggaagag
gaagaaatggatgtagatgaagccacaggggcagccaagaagcacaacggtgtcgggggc
agtccccctaaatccaagctcctgttcagtaacacgggcgctcagaagctgcgagggatg
gacgaagtgtacaacctcttctatgtcaataacaactggtatatctttatgcggctgcac
cagatcctctgcttgcggctgctgcggatttgttcccaagcggaacggcaaattgaggag
gaaaaccgagagagagaatgggagcgggaagtgctgggcgtcaagcgggacaagagcgac
agccctgccatccagctgcggctcaaggagcccatggacgttgacgtggaggactactac
ccggccttcctggacatggtgcgcagcctgctggacggcaacatcgactcgtctcagtat
gaagactcgctgcgggagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgatccagagcatcgtcagacagctgcagcacatcgtcagcgatgagatctgcgtgcag
gtgacggacctttacctggcagagaacaacaacggggccacgggggggcagctgggcacg
cagagcgccaggagcctgctggagtcggcgtaccagcgcaaggcggagcagctcatgtcc
gaggagaactgcttcaagctcatgttcattcagagccaagggcaggtgcagctgaccatc
gagctgctggacacagaggaggagaactcggacgaccctgtggaggccgagcgctggtcg
gactacgtggagcgctacatgaactccgacaccacctcgcccgagctgcgcgagcacctg
gcgcagaaacccgtgtttctccccaggaacctgcggcggatccggaagtgccagcgcggg
cgggagcagcaggagaaggaggggaaggaggggaacagcaagaagccggccgagagcgtg
gacagcctggacaagctggagtgcaggttcaagctcaactcgtacaagatggtgtacgtc
atcaagtccgaggactacatgtaccgccgcacggcgctgctgcgcgcgcaccagtcccac
gagcgcgtgagcaagcgcctgcaccagcggttccaggcctgggtggacaagtggaccaag
gagcacgtgccgcgcgagatggcggccgagaccaccaagtggctgatgggcgaggggctg
gagggcctggtgccctgcaccaccacctgcgactcggagacgctgcacttcgtcagcgtc
aacaagtaccgcgtcaagtacggcccggcgcccaaggcgccctag
DBGET
integrated database retrieval system