Planctomyces sp. SH-PL14: VT03_23455
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Entry
VT03_23455 CDS
T04354
Symbol
araR
Name
(GenBank) Arabinose metabolism transcriptional repressor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
pls
Planctomyces sp. SH-PL14
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pls03000
]
VT03_23455 (araR)
Transcription factors [BR:
pls03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VT03_23455 (araR)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
GntR
Peripla_BP_4
Peripla_BP_1
HTH_Crp_2
HTH_DeoR
HTH_11
Fe_dep_repress
HTH_24
Rrf2
MarR
TrmB
HTH_IclR
HTH_36
DUF4224
Motif
Other DBs
NCBI-ProteinID:
AMV20879
UniProt:
A0A142X1E0
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Position
6030540..6031679
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AA seq
379 aa
AA seq
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MALPDLSVEGGEAARPKYERLKAHLLTEMREGRLQPGVALPSEKRLAESLNVARSTVRQA
MAALEQDGVVSRIHGKGTFVHDQAWQRLKSGTGLYALVVPETQFGFYPALLKSFGGSAEA
AHHQVVVCNTDNDIDKQGNAILQLIDHEVDGVAIVPTTVPTTPAFQIRQLQKHGIPVVFC
SRRVDGIRAPLLAIPFEQVGRLAGEAARAAGHRRAAFFGTHRARSTVAYEAGFRQALAAD
NPGTRLESFCGEGSSPAVADHEEEFAAGLKRLIIDRDDPPTVIFAGFDSLAELLYLQLTQ
AGYRVPEDISIISFGGTQRAHAVARRLTAVTVDEVGMGRMAVDYLDRMRRGTLAVESEET
VDLPLSLHAGATLGPPRGG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggctctgccagatctgagcgtcgaagggggggaggcggctcgtccgaagtacgagcgg
ctgaaggcccacctcctgaccgagatgcgcgaagggcgtctccagcccggtgtcgccctt
ccgtccgagaagcggcttgccgaatcgctgaacgtcgcccgcagcaccgtccggcaggcg
atggcggcccttgagcaggacggtgtcgtctcccgcatccacggcaaggggaccttcgtc
cacgaccaggcgtggcagcggctcaagagcgggaccgggctctacgcgctcgttgttccc
gagacccagttcggcttctatcccgcgctcctcaagagcttcggcgggtcggccgaggcg
gcccaccaccaggtcgtggtgtgcaacaccgacaacgacatcgacaagcaggggaacgcg
atcctccagctcatcgaccatgaggtcgacggggtggcgatcgttccgaccaccgtcccc
accacccccgccttccagatccgccagctccagaagcacggcatcccggtcgtcttctgc
tcgcggcgggtcgacggcatccgggctccgctgctcgccatcccgttcgagcaggtcggc
cggctcgcgggcgaggcggcccgcgcggcgggacatcggcgggcggccttcttcggcacg
caccgggcccggtcgaccgtcgcctacgaggcggggttccggcaggccctggccgcggac
aatcccgggacgcggcttgaatccttctgcggcgaagggtcttcgccggcggtcgccgac
cacgaggaggagttcgcggcggggctcaagcggctcatcatcgaccgcgacgacccgccg
acggtgatcttcgccggcttcgattccctggcggagctcctgtacctgcagctcacgcag
gcgggttaccgcgtaccggaagacatctcgatcatcagcttcggcgggacccagcgggct
cacgccgtcgcgcggcggctgacggccgtcaccgtggacgaagtcggcatggggcggatg
gcggtcgactacctcgaccggatgcggcgggggacgctcgccgtcgagtccgaggagacg
gtcgatctcccgctcagtctccacgccggcgcgacgctcggtccgcctcgcggcggctga
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