Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_14300
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Entry
A4R40_14300 CDS
T05478
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plum03400
]
A4R40_14300
DNA repair and recombination proteins [BR:
plum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A4R40_14300
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_22
AAA_16
SLFN-g3_helicase
LonC_helical
DZR
AAA
zinc_ribbon_2
zf-tcix
TniB
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AWK42580
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Position
3403666..3405423
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AA seq
585 aa
AA seq
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MTFTLRPYQQEAVDATVNHFRHHHEPAVIVLPTGAGKSLVIAELAKLARGKVLVLAHVKE
LVAQNYSKYCAYGLPADIFSAGLQQKQSAGKVVFGSVQSVARNLEHFDNQFSLLIIDECH
RISDDENSQYQQIIHHLRQNNPQLRILGLTATPYRLAIGWIYHYHYHGMTRGDESCFFRD
CIYELPLRYMIKHGFLIPPKRLDMPVMQYDFSQVRSSQQSIFNDTDLNHEIKRQKRITPH
IIRQIIEYSADRKGVMLFAATVEHAKEIFQLLPPGQAALVSADTSTADRDRFIEAFKTQR
LRYMVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIIGRGLRLFPGKKDCLILDYAGNP
HDLYTPEVGSNKPDKQSQPVQVFCPICNFANIFWGKCTSDGEIIEHFGRRCQGWENDQYG
KRRQCEFRFRFKLCPHCNAENDIAARRCHSCQEVLVDPDDMLKAALKLKDALVLRCGGMQ
LIPETDSKGEWLKIIYYDEDGADVSERFRLTTPAQRLAFEHQFLRQHQRAPAIPFNWKTA
SDIVHQQPLLRHPDFVVARKKGRFWQIREKIFDYQGRFRRADELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacttttactttacgtccctatcagcaagaagccgtggatgccaccgttaatcatttc
cggcaccatcatgaacccgcagtcattgtattaccaactggagccggtaaaagcctggtt
attgctgaactggcaaaattagctcgtgggaaagtattagtattggctcatgtaaaagaa
ttagttgcacagaattacagcaaatactgcgcatacggtttaccagcagatattttttcc
gcaggattgcagcaaaaacaaagtgcaggaaaagtcgtgtttggtagcgtgcaatctgtc
gcccgtaatcttgaacattttgataatcaattctctttgctgataattgatgaatgccac
cgtatcagtgatgatgaaaacagccagtaccagcaaattattcatcaccttcggcaaaat
aacccacaactacgtattcttggcttaacagcaacaccttacagactggctatcggctgg
atatatcactatcactatcacggcatgacccgtggtgatgaaagctgttttttccgtgat
tgcatctatgaattgcccctgcgttatatgattaaacacggtttcctgatcccgccaaaa
cggctagatatgcccgttatgcaatatgatttcagccaagttcgctccagtcagcaaagc
atcttcaatgacactgatttaaaccacgaaatcaaacgacaaaaacgcatcacacctcac
attatcagacaaatcattgaatattccgctgaccgcaaaggggttatgctttttgctgca
actgtcgaacatgccaaagagatttttcaattactccctcccggccaagccgcattagtc
agtgctgatacatcaactgcggatcgtgatcggtttatcgaagcctttaaaactcagcga
ttgcgctatatggttaacgtcgccgtattgacaactggatttgatgccccccatgttgat
ctgatagccattctgcgtcctactgaatccgttagtttatatcagcaaattatcggtcgt
ggtttacgattatttcccggcaaaaaagattgcctgattctcgattatgcaggaaatcct
cacgatctctacacaccagaagttggcagcaataaaccggataaacagagccaaccggtt
caagtattctgccctatctgtaacttcgctaatatattttggggaaaatgcacctccgac
ggtgaaattattgagcactttggccgccgctgtcagggttgggaaaacgatcaatatggc
aaacgccgtcaatgtgagttccgctttcgttttaaactctgccctcattgcaatgcagaa
aatgatattgcagcgcggcgttgccacagttgccaagaggtgctggtcgatcccgacgat
atgttgaaagccgcattgaagctcaaagatgcactggtactgcgttgtggtggcatgcaa
ctcatccctgaaactgacagtaaaggcgaatggctgaaaatcatctattacgatgaagat
ggcgctgatgtttcggaacgctttcggcttacaacaccggcccagcggctagcctttgag
caccaatttcttcgtcagcatcaacgtgccccagcgataccttttaactggaaaaccgcc
tcagatatcgttcaccagcaacctttattacgccatccagattttgttgtcgcccgtaaa
aaaggtcgattctggcagattcgtgaaaaaatctttgattaccaaggacgtttccgacga
gcagacgaattgtactaa
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