Paenibacillus lycopersici: GXP70_00535
Help
Entry
GXP70_00535 CDS
T07013
Name
(GenBank) leucine-rich repeat protein
KO
K21449
trimeric autotransporter adhesin
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plyc02000
]
GXP70_00535
Transporters [BR:
plyc02000
]
Other transporters
Pores ion channels [TC:
1
]
GXP70_00535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_5
fn3
SLH
DUF4959
FNIP
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
QHT58614
UniProt:
A0A6C0FTA5
LinkDB
All DBs
Position
complement(128033..132439)
Genome browser
AA seq
1468 aa
AA seq
DB search
MRGSFSKKRKLTISLLALALISLGSWAGGHIREANADVSGDYVYAINGSVATITSYTGTN
KVINIPASLGGYPVTGIGDKAFYYKGLTSVTIPNSVTSIGDEAFYYNGLTSVTIPNSVTS
IGKSSFYHNSLTSVTIPNSVMSIGSSAFSANSLTSVTIPNSVTSIGSSAFAANHLTSATI
PSSVTSIGDYVFYSNSLTSVTIPNSVTSIGVYAFAGNPLTSVTIPNSVTSIGVYAFYQDS
LTSVTISNGVTSIGDHAFDSNPLTSVTIPNSVTSIGAYAFYHNSLTSVTIPNSVTSIGAY
AFATNQLTSVTISNNVTSIEEGTFATNQLTSVTIPNSVTSIGRAAFNTNQLTSVTIPNSV
TSIRGYAFFINPLTNVIVEGNSTIIEVNAFDSLVDFSVIAFDPSSAKTYASANGKKFINI
LSAGVSYAPNGVSEGTRASSTKVTVVVPALISLVKTYYQWSTSVTAPEWGPDVEWVEFTS
GETISTPPTGGAWYLHVRVDDLNPAHGAGYAYSNPFNIVSVPSAPTGVTATAGNGTATVS
FTAPASDGGSTITLYTVTSSPGNVTETSTTAGPITVTGLTNGTAYTFQVTATNSVGESVG
SAASASVTPVAPIGVPGAPTGVTAIAGNGTATVSFTAPASDGGSTITLYTVTSSPGNVTE
TSTTAGPITVTGLTNGTAYTFQVTATNSVGESVGSAASASVTPVAPIGVPGAPTGVTAIA
GNGTATVSFTAPASDGGSAITLYTVTSSPGNVTETSTTASPITVTGLTNGTAYTFQVTAT
NSAGESAASAASASVTPVVPIGVPGAPTGVTATAGNGTATVRFTAPASDGGSAITLYTVT
SSPGNVTETSTTAGPITVTGLTNGTAYTFQVTATNSAGESAASAVSASVTPVAPIGVPSA
PTGVTATAGNGTATVSFTAPASDGGSAITLYTVTSSPGNVTETSTTAGPITVTGLTNGTA
YTFQVTATNSAGESAASAASASVTPVAPIGVPSAPTGVTATAGNGTATVSFTAPASDGGS
TITLYTVTSSPGNVTETSTTAGPITVTGLTNGTAYTFQVTATNSAGESAASAASASVTPV
APIGVPGAPTGVTATAGNGTATVSFTAPASDGGSTITLYTVTSSPGNVTETSTTAGPITV
TGLTNGTAYTFQVTATNSAGESAASAASASVTPVAPPVAPPGVLTVAPIGVPSAPTGVTA
IAGNGTATVSFTAPASDGGSAITLYTVTSSPGNVTETSTTASPITVTGLTNGTAYTFQVT
ATNSAGESAASAASASVTPVAPTRVPIGVPSFSDIQGHWAEASIKQAVSDGIVNGYQDGT
FKPNQTVTRAEFAVMLINALKPQVEGTALTFTDAAENGAWAQKAIAQAVELGIIKGDVDG
SFRPNAPITRAEMAVMLARALKLDVKSVDATEFADDQAIPAWAKGAVAEMEAQGIVQGKG
ANRFAPQDQATRAEAVTVLLKLLAQQSQ
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggagtttttcaaaaaaaaggaagttgacgattagtctgctcgcgctggcactg
atttcgctaggttcgtgggcaggaggtcatattcgggaggcgaatgcggatgtatccgga
gattatgtatacgcaataaatggctcagtcgcaaccattacaagctatacaggaacgaat
aaagtgattaatattcctgcttcgctaggtggatatccagttacgggcataggagataaa
gcattttattataaaggcttaacgagtgtaacgatcccgaacagtgtaacgagcatagga
gatgaagcattttattataacggcttaacgagtgtgacgatcccgaatagtgtaacgagc
ataggaaaatcttcattttatcataacagcttaacgagtgtgacgatcccgaacagtgta
atgagcatagggtcttctgcattttctgctaacagcttaacgagtgtgacgatcccgaac
agtgtaacgagcatagggtcttctgcatttgctgctaaccacttaacgagtgcgacaatc
ccgagcagtgtaacgagcataggggattatgtattttattccaacagcttaacgagtgtg
acgatcccgaacagtgtaacgagcataggagtttatgcatttgctggtaacccattaacg
agtgtgacgatcccgaacagtgtaacgagcataggagtttatgcattttatcaggacagc
ttaacgagtgtgacgatctcgaacggtgtaacgagcataggagatcatgcatttgattct
aacccattaacgagtgtgacgatcccgaacagtgtaacgagtataggagcttatgcattt
tatcataacagcttaacgagtgtgacgatcccgaacagtgtaacaagtataggagcttat
gcatttgctactaaccaattaacgagtgtgacgatctcgaacaatgtaacgagcatagaa
gaaggtacatttgctacgaaccaattaacgagtgtgacgatcccgaacagtgtaacgagc
ataggacgtgctgcatttaatacgaaccaattaacgagtgtgacgatcccgaacagtgta
acgagcataagagggtatgcattttttattaaccccttaacgaatgtgattgttgaaggc
aattcaacaataatagaagttaatgcgtttgattccttagtggatttttcggtgatagct
tttgacccttcatcagcgaagacgtatgcttctgcgaatgggaaaaaatttataaatata
ttgtctgccggggtcagctatgctccaaacggtgtatccgagggaacacgagctagttca
acgaaggtaacggtagtcgtacctgctttgatctcattagttaaaacatattaccaatgg
tctacatcggtaacggcaccagaatgggggccagacgtggagtgggtggagttcacgagc
ggagaaacgatttcaacgccgccgactggaggcgcgtggtatttgcacgttcgtgttgac
gatttgaatccggctcatggcgcaggatatgcttattcaaatccgtttaacattgtttct
gtgccgagtgctccgactggcgtaacggcaactgcagggaacggcacggcgacggtgagt
tttacggctccggcgagtgatgggggaagtacgatcacgctgtatacggtcacgtcgagt
ccagggaatgtaacggaaacaagtacgaccgcgggtccgatcacggtcacggggttgacg
aatggcacggcgtatacgttccaagtcacggcgacgaactccgtaggcgaatcagtggga
tcggccgcatcggcgagtgtgacgcccgtcgcgccgatcggtgtgccgggtgcgccgact
ggcgtaacggcaattgcagggaacggcacggcgacggtgagttttacggctccggcgagt
gatgggggaagtacgatcacgctgtatacggtcacgtcgagtccagggaatgtaacggaa
acaagtacgaccgcgggtccgatcacggtcacggggttgacgaatggcacggcgtatacg
ttccaagtcacggcgacgaactccgtaggcgaatcagtgggatcggccgcatcggcgagt
gtgacgcccgtcgcgccgatcggtgtgccgggtgcgccgactggcgtaacggcaattgca
gggaacggcacggcgacggtgagttttacggctccggcgagcgacgggggaagtgcgatc
acgctgtatacggtcacgtcgagtccagggaatgtaacggaaacaagtacgaccgcgagt
ccgatcacggtcacggggttgacgaatggcacggcgtatacgttccaagtcacggcgacg
aattccgcaggcgaatcagcggcatcggccgcatcggcgagtgtgacgcccgtcgtgccg
atcggtgtgccgggtgcgccgactggcgtaacggcaactgcggggaacggcacggcgacg
gtgcgtttcacggctccggcgagcgatgggggaagtgcgatcacgctgtatacggtcacg
tcgagtccagggaatgtaacggaaacaagtacgaccgcgggtccgatcacggtcacgggg
ttgacgaatggcacggcgtatacgttccaagtcacggcgacgaattccgcaggcgaatca
gcggcatcggccgtatcggcgagtgtgacgcccgtcgcgccgatcggtgtgccgagtgcg
ccaactggcgtaacggcaactgcggggaacggcacggcgacggtgagtttcacggctccg
gcgagcgatgggggaagtgcgatcacgctgtatacggtcacgtcgagtccagggaatgta
acggaaacaagtacgaccgcgggtccgatcacggtcacggggttgacgaatggcacggcg
tatacgttccaagtcacggcgacgaattccgcaggcgaatcagcggcatcggccgcatcg
gcgagtgtgacgcccgtcgcgccgatcggtgtgccgagtgcgccgactggcgtaacggca
actgcggggaacggcacggcgacggtgagtttcacggctccggcgagcgatgggggaagt
acgatcacgctgtatacggtcacgtcgagtccagggaatgtaacggaaacaagtacgacc
gcgggtccgatcacggttacggggttgacgaatggcacggcatatacgttccaagtcacg
gcgacgaattccgcaggcgaatcagcggcatcggccgcatcggcgagtgtgacgcccgta
gcgccgatcggtgtgccgggtgcgccgactggcgtaacggcaactgcggggaacggcacg
gcgacggtgagttttacggctccggcgagcgatgggggaagtacgatcacgctgtatacg
gtcacgtcgagtccagggaatgtaacggaaacaagtacgaccgcgggtccgatcacggtc
acggggttgacgaatggcacggcgtatacgttccaagtcacggcgacgaattccgcaggc
gaatcagcggcatcggccgcatcggcgagtgtgacgcccgtagcgccgcccgtagcgcca
cccggagtgctgaccgtcgcgccgatcggtgtgccgagtgcgccgactggcgtaacggca
attgcagggaacggcacggcgacggtgagttttacggctccggcgagcgatgggggaagt
gcgatcacgctgtatacggtcacgtcgagtccagggaatgtaacggaaacaagtacgacc
gcgagtccgatcacggttacggggttgacgaatggcacggcgtatacgttccaagtcacg
gcgacgaattccgcaggcgaatcagccgcatcggccgcatcggcgagtgtgacgcccgta
gcgccgacccgagtgccgatcggtgtgccgagcttcagcgatattcagggacattgggca
gaagctagcatcaagcaagcggtgagcgacggcatcgtcaatggttaccaggacggtacg
tttaaaccgaatcaaaccgtcacgcgtgcggagtttgcggttatgctgataaatgcgtta
aagccgcaagttgaaggaacggcgctgacgttcacggatgcagcggagaacggagcatgg
gcgcagaaggcaatcgcgcaagctgtagaacttggcatcatcaaaggggatgtagacggc
agtttccgcccgaacgcaccgattacccgtgcggagatggctgtcatgctcgcaagagcg
ctgaaactggatgtcaaatcggttgacgcaacggaattcgcagacgaccaagccattccg
gcatgggcgaaaggtgcagtggccgaaatggaagcgcagggcattgtgcaaggcaaaggg
gcaaaccggtttgctcctcaagaccaagcgacaagagcagaggctgtaacggttctgctg
aagctgctggcacaacagagccaatag
DBGET
integrated database retrieval system