Paenibacillus lycopersici: GXP70_09320
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Entry
GXP70_09320 CDS
T07013
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03030
DNA replication
plyc03430
Mismatch repair
plyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GXP70_09320
03430 Mismatch repair
GXP70_09320
03440 Homologous recombination
GXP70_09320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plyc03032
]
GXP70_09320
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_09320
Enzymes [BR:
plyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GXP70_09320
DNA replication proteins [BR:
plyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GXP70_09320
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GXP70_09320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QHT60121
UniProt:
A0A6C0FXB4
LinkDB
All DBs
Position
2161051..2164929
Genome browser
AA seq
1292 aa
AA seq
DB search
MNGGREFVHLHVHSEFSLLDGAARIKDLVEAAAEQGMKALALTDHGVMYGAVPFYKACRA
RGIKPIIGCEVYLTTGSRFDKGARKDNPIYHLILLAKNETGYRNLMKLSSIGHLEGFHYK
PRIDFDALRAHGDGLICLSSCLGSEIAQHLLHDRHDDALRSAERYRSIFGDDFYLELQDH
GMLEQKKVLQATLALAEQTGIKTVATNDVHYLQPSDAAVQDVLICIGTGKTVEDDDRLQM
LTDQMYLKSADEMYRQFGQAADAVARTAEVAGKCSLELTFGRALLPAFHPIPADMSSSAY
LEALCREGLDARYAGTAEWTADAAYRERATERLRYELSVIDSMGFSDYFLIVWDFIRFAH
EQGIRTGPGRGSSAGSLVAYTLRITDVDPLKYKLLFERFLNPERISMPDIDVDFNDERRD
EVIAYVSAKYGEEHVAQIITFGTMAAKAAVRDVGRAMAVPFGEVDRAAKLIPNQLGISLE
EALRTSAELREASERQPKTADLLRMALKVEGMPRHASTHAAGVVISGEPLTNYVPLQAGT
ERTALTQYSMENLEAVGLLKMDFLGLRTLSILERALDWVKREQGITIDFRHIPDDDPETY
AMLTRGETTGIFQLESAGVRRVLKELKPTQFEDIVSVLALYRPGPMEFIPKYIAGKHGLA
DVEYPHPSLEPILADTYGIIVYQEQIMQIASSMAGFSLGEADLLRRAVSKKKREVLDEQR
AHFVSGSLSQGYSERDANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAWLKANHPVPFMA
SMLASVTGNQRKTAEYVDECRRMGIEVLAPGVNESSVTFTPVGGAIRFGLASIKNVGTQA
IESLLKEREERKFDSLLDLCRRVDLRVVNKRVLESLIQAGACDSLGAHRAQLIAALDETV
EAALKWRKEREELQIELFGFDEVQNWDVELPEVLPYTTGQLLGLERELLGMYLSGHPLDD
FEEALDGLPVDRLVDLAEAPDGAYVLVAAMVLTRKPLMTRKGQAMAFLEIEDRIMRVEAV
AFPTVWKRHEQALEPGRLVLALAKLQQQDEDYKLLLEDVLPLGRGEGGGAPGDLAAQVQR
LLRFGQSRAARDQAAAQGRGAGGAALQDGGAVAPAGAAPFGGARPDGAGTAVPGAAGSRA
GASGAAGGRQAEPGHAAGRPHTAAQPGGRARSGPAAGRPQAARDGGGREPRADAQGAAPS
AQAPAAAGGSAAPAARRVQRLYVKIAAGREEPAALEKLKALLTRSAGPLETVLFYEREGR
TVALSESFRVKPSERLLHDIEAIFGKGSAIVK
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggacgggaattcgtgcatttgcacgtacatagcgaattcagcctgctcgac
ggggcggctcggatcaaggacctggtcgaggctgccgcggagcagggcatgaaggcgctg
gcgctgaccgaccacggggtcatgtacggcgccgttccgttttataaagcttgccgggcc
agggggatcaagccgatcatcggctgcgaggtttatttgacgacgggctctcgtttcgat
aaaggggcgcgcaaggataatccgatctatcacctcatcctgctcgcgaagaacgagaca
ggctaccgcaatttgatgaaactgagctccatcgggcatttggagggattccactataag
ccgcggatcgatttcgacgcgctgcgggcgcacggggacggcctgatctgtctcagctcc
tgcctcggcagcgaaatcgcgcagcatctgctgcacgaccggcatgacgatgcgctccgc
tcggcggaacggtaccggtcgatcttcggcgacgacttctacctcgagcttcaggatcac
ggcatgctggagcagaagaaggtgctgcaggcgacgctggcgctggccgagcagacgggg
atcaagaccgtggcgacgaacgacgtccattacttgcagccgtccgatgccgcggtgcag
gacgtgctgatctgcatcggcaccggcaaaaccgtcgaggacgacgaccggctgcaaatg
ctgaccgaccagatgtatttgaaatcggcggacgagatgtaccggcaattcgggcaagcc
gcggacgcggtggcgcgcacggccgaagtcgccgggaaatgctcgctcgagctgacgttc
ggcagggcgctgctgcctgccttccacccgattccggccgacatgagctcatccgcttat
ctggaggcgctgtgccgggaaggactcgacgcgcgctatgcgggcactgcggagtggacg
gcggacgccgcttaccgtgagcgcgcgacggaacggctccggtacgagttgagcgtcatc
gacagcatggggttcagcgattatttcctgatcgtatgggatttcatccgcttcgcccat
gagcagggcatccggacaggccccggacggggctcctcggcgggcagcctcgtggcgtac
acgcttcgcattacggacgtcgacccgctgaaatacaagctgctgttcgaacgttttctg
aatcccgagcggatttcgatgccggatatcgacgtcgatttcaacgacgagcggcgggac
gaagtcatcgcctacgtgtcggccaaatacggcgaggagcatgtcgcccagatcatcacg
ttcggaacgatggccgccaaagcggcggtccgcgacgtcggccgggcgatggcggtgccg
ttcggcgaagtcgaccgcgcggccaagcttattccgaaccagctcggcatttcgctcgaa
gaggcgctgcggacgagcgccgaactgcgcgaggcgtctgagcgccagccgaagacggcc
gacctgctgcgcatggcgctcaaggtcgaagggatgccgcgccatgcttcgacccatgcc
gccggcgtcgtcatctccggcgagccgctcacgaattacgtgccgctgcaggccgggacc
gagcgaacggccttgacgcagtattccatggagaatctggaagccgtcggcctgctgaag
atggattttctcgggctgcgcaccttgtcgattctggagcgcgccttggactgggtgaag
cgggagcagggcattacgatcgatttccgccacattccggacgacgatcccgagacgtac
gcgatgctgacgcgcggcgagacgacgggcatcttccagctggaatccgccggcgtccgc
cgggtgctgaaggagctgaagccgacgcaattcgaagatatcgtctcggtgcttgcgctg
taccgcccggggccgatggaatttatccccaagtacatcgcgggcaagcacggtctcgcg
gacgtcgagtacccgcatccgtcgctggagccgattcttgccgacacgtacggcatcatc
gtctatcaggagcagatcatgcagatcgcgtcgtcgatggcgggcttctcgctcggcgaa
gccgacctgctgcgccgcgccgtgtcgaagaagaagcgcgaggtgctggacgagcagcgc
gcgcatttcgtcagcggcagcttgtcgcagggctatagcgaacgggacgccaacgccgtc
tacgacatgatcgtccgcttcgcggactacggttttccgcgcgcgcacgcggccgcgtac
ggcgtgctcgcgttccagacggcgtggctgaaagcgaatcatcccgtgccgttcatggcg
tcgatgctcgcttccgtgacgggcaatcagcgcaagacggcggaatacgtggacgagtgc
cgccggatgggcatcgaggtgctggctcccggcgtgaacgagagcagcgtgacgttcacg
cccgtcggcggcgcgatccggttcggcctggcgtcgatcaagaacgtcggcacgcaggcg
atcgagtcgctgctgaaggagcgggaagagcggaagttcgacagcctgctcgacctgtgc
cgccgcgtcgatttgcgcgtcgtgaacaagcgcgtgctggagtcgctgatccaggcgggc
gcctgcgattcgctcggcgcgcaccgcgcgcagctgatcgcggcgctggacgaaacggtc
gaagccgcgctgaaatggcgcaaggagcgcgaggagctccaaatcgagctgttcggcttc
gacgaggtgcagaactgggacgtcgagctgccggaagtcctgccttacacgaccgggcag
ctgctcggtctggagcgggaactgctcggcatgtatttgtccggccatccgctcgacgat
ttcgaggaagcgctggacggcctgccggtcgaccggctcgtcgatctcgccgaagctccg
gacggggcgtacgtgctcgtcgcggcgatggttctcacgcggaagccgctgatgacgcgc
aaaggccaggcgatggcgttcctcgagatcgaggaccgcatcatgcgcgtggaggcggtg
gcgttcccgacggtgtggaagcgccacgagcaggcgctcgagcccggccgtctcgtgctc
gcgctggccaagctgcagcagcaggacgaggactataagctgctgctcgaggacgtgctg
ccgctcggccgcggcgagggcggcggcgcgccgggagacctcgcggcgcaggtgcagcgc
ctgctgcgcttcggccaaagccgggccgcgcgggatcaagcggccgcgcaagggcgcggc
gccggcggagctgcgctgcaggacggcggcgccgtcgcgccggcaggggccgcgccgttc
ggcggcgccaggccggacggcgcgggcacggccgtacccggcgccgcgggcagccgcgcc
ggcgcttccggcgcagccggcggccgccaggcggagccgggccatgcggccggcaggccg
cacacggcggcgcagcccggcggccgcgcgcgcagcggccccgcggcgggccggccgcag
gcggcccgggacggcggcggccgcgagccgcgcgccgatgcgcagggcgccgcgccgagc
gcgcaagcgcctgccgccgcggggggcagcgccgccccggccgccaggcgcgtccagcgg
ctctatgtcaaaatcgccgccggccgcgaggaacccgcggcgctggagaagctgaaagcg
ctgctgacccgcagcgcgggcccgctcgaaacggtgctcttctacgagcgcgaagggcgt
acggtcgcgctgagcgagtcgttccgggtcaagccttccgagcggctgctgcacgacatt
gaagcgattttcggcaaaggctcggcgatcgtcaaataa
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integrated database retrieval system
