Paenibacillus macerans: LMZ02_15105
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Entry
LMZ02_15105 CDS
T09394
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmae
Paenibacillus macerans
Pathway
pmae03030
DNA replication
pmae03430
Mismatch repair
pmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMZ02_15105
03430 Mismatch repair
LMZ02_15105
03440 Homologous recombination
LMZ02_15105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmae03032
]
LMZ02_15105
03400 DNA repair and recombination proteins [BR:
pmae03400
]
LMZ02_15105
Enzymes [BR:
pmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMZ02_15105
DNA replication proteins [BR:
pmae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMZ02_15105
DNA repair and recombination proteins [BR:
pmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMZ02_15105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
DUF6282
HROB
Motif
Other DBs
NCBI-ProteinID:
UMV50590
LinkDB
All DBs
Position
3430903..3434874
Genome browser
AA seq
1323 aa
AA seq
DB search
MDSFVHLHVHSEYSLLDGAARLEELVAKAAASGMKALALTDHGVMYGAVPFYKLCKAHGI
KPIIGCEVYFTAGSRKERGSRQDQPIHHLILLAKNETGYRNLMKLVSIGHLEGFHYKPRI
DWEALERHREGLICLSACLGGEVPHHLLRGSYEEAKKAALRYKSAFGGDFYLELQDHGLP
EQKKVNLQLIQLAQETGIELAATNDVHYLNREDAEVQDVLICIGTGKTVDDENRLKMNTD
QLYLKTGDEMAALFPHVPEALANTVKIAERCELELEFGRHILPAYRPIPEGLTAESYLAE
LCEKGLEERYGHLDVWQDKADRERLEQRLRYELEVIGKMGFSDYFLIVWDFIAFAHHSGI
VTGPGRGSSAGSLVAYVLRITDVDPIKYNLLFERFLNPERVTMPDIDIDFSDERRDEVIA
YVASKYGAEHVAQIITFGTMAARAAVRDVGRALNVPFGEVDKAAKLIPAHLGITIERALK
ESPDLKAMYESAPRIKGLLDMAMKVEGMPRHASTHAAGVVISRDPLTDAVPLQSGSEDAA
LTQYSMENLEAIGLLKMDFLGLRTLSIIERCLRWIEEQTGSVPDFRHVPDNDPATYDMLG
RGETTGVFQLESAGMRRVLRELKPTLFEDIISVNALYRPGPMEFIPKYIASKHGQVTVEF
PHPDLESILNDTYGIIVYQEQIMQIASKMAGFSLGEADLLRRAVSKKKREVLDEQRGHFV
SGSLDQGYTAEEANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMAAMLT
AVMGSHRKVAEYIVECRRMGITVLPPDVNESGVLFTPQARVGAGAADGSFAGGTAGGPEA
GGDVTAAETVLAARGQAGASGGEDAAEPVSPAAALGVIRFGLAAIKNVGTQAIESIMRER
KERPFDSLLDFCRRVDLRTCNKRVIESLIQGGAFDSLPGHRAQLLAMLDETVEAALKWRK
EREDLQIQLFDFVETPNWDIEYPDVRPFTAAQQLELERELLGLYLSGHPLDDYDELLEQE
GADRLMDLAEAADESRTVVAGMVVSVKAITTKQGKAMAFMELEDQIERCEVVLFPEVWRR
CSAHVSKGALLALRATVQLQDEGFKLLADEVAPLGAPALAQLRRGLTRGRGAYGGAGRSA
AAGSGGGADAGAGSRAGGNGSAGKGASASRSGGAEQPPARAAAAQGAPAAAARPRREPAA
PAPAGAPQGAAGQAPGHGAAAGRPGARDAAANAAPPAAGGRRGQKPPAQQRVFIKITAAA
ENARLLEQLKTLLEQHPGPVGTVLFYESTGKLLALSERYNIKPSPALFREMEQMLGPDTV
KVR
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgttcatctgcacgtacatagcgaatacagcttgctcgacggcgcggcc
agactggaagagctcgtcgccaaagcggcggcttccggcatgaaggcgctcgcgctgacg
gatcacggtgtcatgtacggcgcggttcctttttataaattgtgcaaagctcacgggatc
aagccgatcatcggctgtgaagtttattttacggcaggctcgcgcaaggagcgggggagc
cgtcaggatcagccgatccaccatctgattttgctggctaaaaatgaaaccgggtaccgg
aatttgatgaaactcgtctcgatcggccatctggaaggcttccactacaaaccgcggatc
gattgggaggcgctggagcggcatcgggaagggctgatctgcttgagcgcctgtctgggc
ggagaggtgccgcatcatttgctgcgcggatcttacgaggaagcgaaaaaagcggcgctg
cgctataagtcggcgtttggcggagatttttatctggagctgcaggatcacggtctgccg
gagcaaaaaaaggtaaacctccagcttattcagctggcgcaggagacggggatcgaactg
gcggccaccaacgatgtgcattacttgaacagggaggacgccgaggttcaggatgtgctc
atttgcatcggcaccggcaaaacggtcgacgacgaaaaccggctcaaaatgaacacggac
cagctctacctgaaaaccggggatgagatggccgcgttgttcccgcatgtgcccgaggcg
ctggccaacacggtaaaaatagccgagcgctgcgagcttgagctggaattcggccgccat
attttgccggcttaccgcccgattccggaagggctgaccgcggagagctatttggctgag
ctgtgcgaaaaagggctggaggagcgctacggccatctggacgtgtggcaggacaaagcg
gatcgggaacggcttgagcagcggctgcgttatgagctggaagtgatcggcaagatggga
ttttccgattattttctcatcgtttgggatttcattgccttcgctcaccacagcgggatc
gttaccggcccgggccggggatcgtcggcaggcagcctggttgcttacgtgctgcgcatc
accgatgtcgacccgatcaagtataacctgctgtttgaacggtttttgaatcccgagcgg
gtgacgatgccggatatcgatatcgatttcagcgacgagcgccgcgacgaggtgatcgcc
tatgtggcaagcaaatacggggccgagcacgtggcccagatcattacgttcgggacgatg
gcggcccgcgccgccgttcgcgatgtgggccgggcgctgaatgtgccgtttggcgaagtc
gacaaggcggcgaagctgattccggcgcatctgggcatcacgattgaacgggcccttaag
gaaagcccggatttaaaagcgatgtacgaatcggcgccgcggatcaaagggctgctggac
atggcgatgaaggtggaaggcatgccgcggcacgcctccacgcacgccgccggggtcgtc
atctcgcgcgatccgctgacggatgcggtgccgctgcaatcggggagcgaggatgccgct
ttaacccaatattccatggaaaacctggaagcgatcggcctgctcaaaatggactttttg
ggcctgcgcacgttgtccatcatcgagcgctgcctgcgctggatcgaagagcagacggga
agtgtccccgatttccggcatgttcccgataatgatccggctacctatgacatgctcgga
cgaggcgaaacgaccggggtgttccaattggagtcggcggggatgcgccgggttttgcgc
gaattgaagccgacgttgttcgaagatatcatttcggtgaacgcgctttaccgtcccggc
ccgatggagttcattccgaaatacatcgccagcaagcacgggcaggttaccgtcgagttt
ccgcatccggatcttgaatcaatactgaacgacacgtatgggatcatcgtttatcaggag
caaatcatgcaaatcgcctccaaaatggcgggattttccttgggtgaagccgatttgctg
cggcgcgccgtctcgaagaaaaagcgggaggtgctggacgagcagcgcggccatttcgtc
agcggcagcctggaccagggttataccgccgaggaagcgaacgctgtatacgatatgatc
gtccgctttgccgattacggcttcccgcgggcgcatgcggccgcctatggcgtgctggcg
ttccagacggcgtatctgaaggcgcattatcccgtccagttcatggccgcgatgctgaca
gccgttatgggcagccaccgcaaggtggcggagtatatcgtcgaatgccggcggatgggc
atcaccgtgctgccgccggacgtgaacgaaagcggcgtgttgtttacgccgcaggctcgg
gttggcgccggagctgcggacgggagcttcgcgggaggaacggcgggaggcccggaagcc
gggggagacgtcaccgcagcggaaaccgtcttggcggcgcgggggcaggccggcgcttcc
ggcggagaagatgccgcggagcccgttagccccgccgcggccttgggggtgatccgcttc
gggctggcagcgatcaaaaacgtcggcacccaggcgatcgaaagcattatgcgcgagcgg
aaggagcggccgttcgacagcctgctcgatttttgccgccgcgtcgatctgcgcacgtgc
aacaagcgcgttatcgaatcgctgattcagggcggcgcgtttgactccctcccggggcac
cgcgcccaactgctggcgatgctggacgagacggtggaagccgcgcttaaatggcgcaag
gagcgtgaggatttgcaaatccagctgttcgattttgtggaaacgccaaactgggacatc
gagtacccggatgttcggccgtttaccgccgcgcagcagctggaattggagcgggagctg
ctcggactgtacctgtccggccatccgctggacgattacgatgagctgcttgagcaggaa
ggcgccgaccggctgatggatttggccgaagcggcggatgaaagccggacggtggtggcc
gggatggtcgtgtcggtcaaagcgatcacgacgaagcagggcaaggcgatggccttcatg
gagctggaggaccagatcgagcgctgcgaggtcgtgttgtttcccgaagtgtggcggcgc
tgctcggcacacgtcagcaagggggccttgcttgcgctgcgcgccaccgtccagctgcag
gacgaaggcttcaagctgctggccgacgaggtggccccgctcggcgcgccagcgctggcg
cagctgcgccgcgggctcacccgcgggcgcggggcgtatggcggcgccgggagaagcgcc
gcagcgggcagcggcggcggagcggacgcgggcgcgggctcgcgcgcaggcggcaacggc
agcgccggcaagggcgcgagcgccagccgaagcggcggcgccgagcagccgcccgcgcgc
gcagcggcggcgcagggcgcgcctgcggccgcggcccggccccggcgcgagcccgccgcc
ccggcgccggcaggggcgccgcaaggcgccgccgggcaggcgcccggccatggcgccgct
gccgggcgtcccggcgcccgcgatgccgcggccaacgccgcaccgcccgccgcgggcggc
cgccgcggacagaagccgccggcgcagcagcgcgtcttcatcaaaatcacggccgcggcg
gagaacgcgcgcctgctggaacagctgaagacgctgctggagcagcatcccggaccggtc
gggacggtactgttctacgagagcaccggcaagctgctggccttgtccgaacgttacaac
attaaaccgtcccccgcgcttttccgcgaaatggaacagatgctcggtccggataccgtc
aaggtgagataa
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integrated database retrieval system
