Providencia manganoxydans: JI723_14800
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Entry
JI723_14800 CDS
T08377
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pmag
Providencia manganoxydans
Pathway
pmag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JI723_14800 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmag03400
]
JI723_14800 (uvrB)
DNA repair and recombination proteins [BR:
pmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JI723_14800 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JI723_14800 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
DUF1192
AAA_30
UB2H
DUF1465
SBDS_domain_II
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QQO61528
LinkDB
All DBs
Position
complement(3273578..3275596)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKEFKLYSDFQPGGDQPEAIRRLSEGLEDGLAHQTLLGVTGSGKTFTIANVIAKENRPT
MLMAHNKTLAAQLYSEMKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDSYLKMMLHLTDGMIIDQRSILRRLADLQ
YTRNDQAFTRGTFRVRGEVIDIFPAESDEYALRVELFDEEVERLSLFDPLTGQIQHRVPR
FTVYPKTHYVTPRERILEAMEQIKIELADRRKVLLENHKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPADGLLVVDESHVTIPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGNYEIEKSGSEVIEQVVRPTGLLD
PVIEVRPVTTQVDDLLSEIRIRAQKNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITNSMDKAIKETERRRAKQMAFNEEHGIVPQGLNKKIGDILQIG
HKVGGKSKGRGKESVKTDKRDDIQLLSTKELEQRISQLEAQMYQHAQDLEFEAAANVRDQ
LQELRERFIANS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaattcaagttgtattctgatttccaacccggaggggatcaacccgaagct
attcgtcggctttctgaagggttggaagatggcctcgcacatcaaaccttacttggtgta
acgggttcaggtaaaacctttactattgctaatgtaattgctaaagaaaatcgaccaacg
atgttaatggcacataacaaaacgttggctgcgcagctgtatagtgaaatgaaggctttt
ttccctgataatgcagtggagtattttgtttcctactatgattattatcagcctgaagca
tacgtgcctagttctgatacctttatcgaaaaagatgcgtctgtcaacgaacatatcgag
cagatgcgtttgtcagcaacaaaagccttactggaacgccgtgacgtgattgtggtcgct
tcagtttctgctatttatggtcttggtgatcctgacagctatttaaaaatgatgctgcac
ttaactgatgggatgattatcgatcagcgctccattttacgccgtttagctgatttacaa
tacacgcgtaatgaccaagcgttcacgcgtggtacttttcgtgtccgtggtgaagtgatt
gatattttccccgcagagtctgatgaatatgcacttcgtgtcgagttatttgatgaagaa
gtggagcgcctgtcgctgtttgatccgctaacagggcaaattcagcatcgtgtaccacgc
tttacggtttacccgaaaacacactatgtgacaccaagagagcggatccttgaggcgatg
gagcagatcaaaattgagctggctgataggcgcaaagtgttgctagagaatcataagcta
cttgaagaacagcggataacgcaacggactcagttcgatctggaaatgatgaatgagtta
ggttattgctctggtattgaaaactattcacgttatctatctggccgtgcaccgggcgag
ccgccaccaacattatttgattacctacctgctgatggtttattagttgtggatgaatct
cacgttaccatcccacaaattggtgctatgtataaaggcgaccgctcacgtaaagaaact
ctagttgagtatgggttccgcctgccttctgctctggataaccgcccaatgcgttttgaa
gagtttgaagcccttgcgccacaaacgatttatgtatcagcaacgccgggtaactatgaa
attgagaaatcaggttctgaagttatagagcaagtggtaaggccgacaggtctattagat
cctgttattgaggttcgccctgttacgactcaagttgatgacttgctgtcagaaatccgt
attcgagcgcaaaaaaatgaacgggtattggtcacaacactgacaaaacgcatggcagaa
gatttaacggaataccttgaagagcatggtgagcgtgtgcgttatctccattctgatatt
gatacggttgagagggtcgaaatcattcgtgatttgcgcttgggagagtttgatgtgttg
gtgggtatcaacctactcagagaagggcttgatatgccagaagtatcactggtagcgatt
ttggacgctgataaagaaggtttcttgcgctcagaacgttcactcatccagacaatcggt
cgtgctgcacgtaacttgaatggtaaagcgattttgtatggagacaaaatcacgaattca
atggataaagcgattaaagaaacagagcgtcgccgtgcaaagcaaatggcctttaatgag
gaacatggcattgttccacaaggtttgaataagaaaattggggatatcttacagattggc
cataaagtaggtggcaaatccaaaggccgtggtaaagaaagtgtcaaaacagataaacgt
gatgatattcaattactatccaccaaagagctggagcaacgcatttcacaacttgaagca
caaatgtatcaacatgcacaagatttggagtttgaggccgcagcgaatgttagggatcag
ttgcaggaactaagagaacgctttattgcaaattcatga
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