Paenibacillus marchantiae: PTQ21_27070
Help
Entry
PTQ21_27070 CDS
T08974
Name
(GenBank) IS3 family transposase
Organism
pmah
Paenibacillus marchantiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
rve_2
HTH_28
rve_3
HTH_Tnp_1
HTH_29
HTH_23
HTH_32
CENP-B_N
Terminase_5
DDE_Tnp_IS240
DUF5395
Herpes_BLRF2
Motif
Other DBs
NCBI-ProteinID:
WDQ32010
LinkDB
All DBs
Position
join(5995322..5995778,5995778..5996682)
Genome browser
AA seq
453 aa
AA seq
DB search
MPKFSLDEKLKAIHRYQNGTEGVKSIAKSLRINHETLRMWIRQYEYHGVKAFEKSYTAYT
KTFKLDVLTYINENGTSPNEAAVIFNIPSPRIIRKWRIQFNEDGMDGLKSKKKGRPLMKN
TNKNMTKKLEPGHESVEALQAELERLRMENAYFKKVECLSSKQGKITKQDKAQVVYELRL
EFPVVALLAFAEVPRSTFYYWVKQFDKPDLDADLKLLIQSIYEEHQGRYGYRRIRDELVN
REHRVNHKKVQRIMKELGLKSVVRMKKYRSYKGTVGNIAPNVLDRNFQAEKPNEKWVTDI
TEFKLFGEKLYLSPVLDLFNGEIITYTVGSRPTYSLVSDMLNKAFKRLSNEDELLLHSDQ
GWHYQMKQYQHALKERAIIQSMSRKGNCYDNAVMENFFGIMKSEFLYLNEFESLDDFKQE
LAQYIDYYNDKHIKSKLKGMSPVQYRIHAIQVA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaaattcagtttagatgagaaattgaaagccattcatagatatcagaatggtact
gaaggagtcaaaagtattgcaaaatcattacggataaatcatgaaactttacgtatgtgg
attaggcaatacgaatatcacggcgtcaaagcttttgaaaagagctatacagcttacact
aagacatttaaactagacgtactcacctatataaacgagaatgggacgtctccaaatgaa
gctgcggtcattttcaatataccctctcctaggattattagaaaatggcgtattcaattc
aatgaggatggaatggacggcctgaaatcaaagaaaaaggggcgtccactcatgaaaaat
acgaacaaaaatatgacgaagaagctagaacctggccatgaatcagttgaagctctacaa
gctgaattagaacgtttgcgtatggaaaacgcctattttaaaaaagttgaatgccttagt
tcaaaacaaggaaaaatcaccaaacaagacaaagcgcaagtagtctatgaattaaggctt
gaattcccggtggttgcattgctagcgttcgctgaagtcccacgtagcaccttctattac
tgggtgaaacagtttgacaagcccgatctagacgcagacctgaaactccttattcaatcc
atttacgaggaacatcaggggcgttatggctatcgtcgtatccgtgatgaactagttaat
cgtgaacaccgagttaaccataaaaaagtacagcgtatcatgaaagaattaggcctgaaa
tcagtagtgcgtatgaaaaaatatcgttcctataaaggaacagtgggtaacattgcacca
aacgtactggatcgtaactttcaagcagaaaaaccaaatgagaaatgggttaccgatatt
acggaatttaagttgtttggagaaaagctttatttatcacctgttctggacttatttaac
ggtgaaattatcacgtacacagtaggatctcgccctacttattcattagtctccgacatg
ctaaataaagcttttaaacgcttatccaacgaggatgagctcctcctgcattcggatcaa
ggctggcactaccagatgaagcagtatcaacatgctttgaaggaacgggcgattatccag
agcatgtcacgcaaaggaaattgttacgataacgcagtaatggagaacttctttggcatt
atgaagtcagaatttctctatcttaatgagtttgaaagtctagatgacttcaagcaagaa
ctagcacaatacatcgattactacaatgacaaacacattaagtcaaaattaaaaggcatg
agcccggtacaataccgaattcatgccatacaggttgcataa
DBGET
integrated database retrieval system
